Isolation, characterization and screening for fiber hydrolytic enzymes-producing streptomycetes of Jordanian forest soils

Biotechnology

Volumn 6, Issue 1, 2007, Pages 120-128

  Saadoun, Ismail ^a   Rawashdeh, Rifaat ^a   Dayeh, Tasnim ^a   Ababneh, Qotaiba ^a   Mahasneh, Amjad ^a  

^a JORDAN UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Jordan)

Author keywords

Enzymes; Hydrolytic; RAPD; Streptomyces

Indexed keywords

CHARACTERIZATION; FOOD PROCESSING; POLYMORPHISM; SOILS;

HYDROLYTIC ENZYMES; STREPTOMYCETES;

ENZYMES;

STREPTOMYCES; STREPTOMYCETACEAE; STREPTOMYCINEAE;

EID: 34848892118     PISSN: 1682296X     EISSN: 16822978     Source Type: Journal    
DOI: 10.3923/biotech.2007.120.128     Document Type: Article

References (43)

1. Al-Eisawi, D., A. El-Oqlah, S. Oran and J. Lahham, 2000. Jordan Country Study on Biological Diversity: Plant Biodiversity and Taxonomy. UNDP Publication, Amman, pp: 70.
2. Arbeit, T.L., 1994. Laboratory Procedures for Epidemiological Analysis. In Manual of Clinical Microbiology. Ed., Murray, P.R., E.J. Barn, M.A. Pfaller, F.C. Tenover and R.H. Yolher, 6th Edn. Washington DC: ASM Press.
3. Beg, Q.K., B. Bhushan, M. Kapoor and G.S. Hoondal, 2000. Effect of amino acids on production of xylanase and pectinase from Streptomyces sp. QG-11-3. World J. Microbiol. Biotechnol., 16: 211-213.
4. Blanchette, RA., J.B. Sutherland andD.L. Crawford, 1981. Actinomycetes in discolored wood of living silver maple. Can. J. Bot., 59: 1-7.
5. Blanco, A., T. Vidal, J.F. Colom and F.I.J. Pastor, 1995. Purification and properties of xylanase A from alkali-tolerant Bacillus sp. strain Bp-23. Applied Enviom. Microbiol., 61: 4468-4470.
6. Caetano-Annolles, G., 1993. Amplifying DNA with arbitrary oligonucleotide primers. PCR Methods Applications, 3: 85-94.
7. Caetano-Annolles, G. and P.M. Gresshoff, 1994. DNA amplification using arbitrary minihairpin oligonucleotide primers. Biotechnology, 12: 619-623.
8. Carder, J.H., 1986. Detection and quantitation of cellulase by congo red staining of substrates in a cup-plate diffusion assay. Anal. Biochem., 153: 75-79.
9. Coughlan, M.P. and G.P. Hazlewood, 1993. B-1, 4-D-xylan degrading enzyme systems: Biochemistry, molecular biology and applications. Biotechnol. Applied Biochem., 17: 259-289.
10. Crawford, D.L. and J.B. Sutherland, 1979. The role of actinomycetes in the decomposition of lignocellulose. Dev. Ind. Microbiol., 20: 143-151.
11. Daffonchio, D., G. Baggi, G.P. Molinari, G. Ranalli and C. Sorlini, 1996. Effect of the herbicide molinate on the metabolic activities of degradative Streptomyces griseus strain. J. Enviorn. Sci. Health, 31: 257-268.
12. Demeke, T. andR.P. Adams, 1994. The Use of PCR-RAPD Analysis in Plant Taxonomy and Evolution. In PCR Technology: Current Innovations. Griffin, H. and A. Griffin (Eds.). London: CRC Press, pp: 179-191.
13. Elegir, G., G. Szakaacs and T.W. Jeffries, 1994. Purification, characterization and substrate specificities of multiple xylanas es from Streptomyces sp. strain B-12-2. Applied Enviom Microbiol., 60: 2609-2615.
14. El-nakeeb, M.A. and H.A. Lechevalier, 1963. Selective isolation of aerobic actinomycetes. Applied Microbiol., 11: 75-77.
15. Gilbert, M., R. Morosoli, F. Shareck and D. Kluepfel, 1995. Production and secretion of proteins by streptomycetes. Crit. Rev. Biotech., 15: 13-39.
16. Gharaibeh, R., I. Saadoun and A. Mahasneh, 2003. Genotypic and phenotypic characteristics of antibiotic-producing soil Streptomyces investigated by RAPD-PCR. J. Basic Microbiol., 43: 18-27.
17. Hopwood, D.A., M.J. Bibb, K.F. Chater, T. Kieser, C.J. Bruton, H.M. Kieser, D.J. Lydiate, C.P. Smith and H. Schrempf, 1985. Genetic Manipulation of Streptomyces: A Laboratory Manual. John Innes Foundation. Norwich. United Kingdom, pp: 79-80.
18. Katsifas, E.A., E.P. Giannoutsou and A.D. Karagouni, 1999. Diversity of streptomycetes among specific Greek terrestrial ecosystems. Lett. Applied Microbiol., 29: 48-51.
19. King, B. and H.O.W. Eggins, 1977. Micromorphology of streptomycete colonization of wood. J. Instrum. Wood Sci., 7: 24-29.
20. Kuster, E. and S.T. Williams, 1964. Selection media for the isolation of streptomycetes. Nature, 202: 928-929.
21. Malkawi, H.I., I. Saadoun, F. Moumani and M.M.M. Meqdam, 1999. Use of RAPD-PCR to detect genetic diversity of soil Streptomyces isolates. New Microbiol., 22: 53-58.
22. Mangin, I., D. Corroler, A. Reinhardt and M. Gueguen, 1999. Genetic diversity among diary lactococcal strains investigated by polymerase chain reaction with three arbitrary primers. J. Applied Microbiol., 86: 514-520.
23. Mehling, A., U.F. Wehmeier and W. Piepersberg, 1995. Nucleotide sequences of streptomycete 16S ribosomal DNA: Towards a specific identification system for streptomycetes using PCR. Microbiology, 141: 2139-2147.
24. Nanmori, T., T. Watanabe, R. Shirike, A. Kohno and Y. Kawamura, 1990. Purification and properties of thermostable xylanase and ß-xylosidase produced by a newly isolated Bacillus stearothermophilus strain. J. Bacteriol., 172: 6669-6672.
25. Niehaus, F., C. Bertoldo, M. Kahler and G. Antranikiar, 1999. Extremophiles as a source of novel enzymes for industrial application. Applied Microbiol. Biotechnol., 5: 711-729.
26. Nonomura, H., 1974. Key for classification and identification of 458 species of the streptomycetes included in ISP. J. Ferm. Technol., 52: 78-92.
27. Power, E.G.M., 1996. RAPD typing in microbiology-a technical review. J. Hosp. Infec., 34: 247-265.
28. Prauser, H., 1964. Aptness and application of colour for exact description of colours of Streptomyces. Zeitschrift fur Allgemeine Mikrobiologie ,4: 95-98.
29. Saadoun, I. and F. Al-Momani, 1997. Streptomycetes from Jordan soils active against Agrobacterium tumefaciens. Actinomycetes, 8: 29-36.
30. Saadoun, I., F. AL-Momani, H. Malkawi and M.J. Mohammad, 1999. Isolation, identification and analysis of antibacterial activity of soil streptomycetes isolated from north Jordan. Microbios., 100: 41-46.
31. Saadoun, I. and R. Gharaibeh, 2002. The Streptomyces flora of Jordan and its potential as a source of antibiotics active against antibiotic-resistant gram-negative bacteria. World J. Microbiol. Biotechnol., 18: 465-470.
32. Saadoun, I. and R. Gharaibeh, 2003. The Streptomyces flora of Badia region of Jordan and its potenttial as a source of antibiotics active against antibioticresistant bacteria. J. Arid Environ,. 53: 365-371.
33. Sambrook, J., E.F. Fritsch and T. Maniatis, 1989. Molecular Cloning: A Llaboratory Manual. New York: Cold Spring Harbor Laboratory, pp: 150-478.
34. Semedo, L.T., R.C. Gomes, E.P. Bon and R.R. Coelho, 2000. Endo cellulase and exocellulase activities of two streptomycetes strains isolated from a forest soil. Applied Biochem. Biotechnol., 84: 267-276.
35. Shirling, E.B. and D. Gottlieb, 1966. Methods for characterization of Streptomyces species. Int. J. Syst. Bacteriol., 16: 313-340.
36. Sneath, P.H.A. andR.R. Sokal, 1973. Numerical Taxonomy. San Francisco: W.H. Freeman, San Francisco, USA, pp: 100-150.
37. Squires, M.W., E.C. Naber and V.D. Toelle, 1991. The effects of heat, water, acid and alkali treatment of tomato cannery wastes on growth, metabolizable energy value and nitrogen utilization of broiler chicks. Poult. Sci., 71: 522-529.
38. Sutherland, J.B., RA. Blanchette, D.L. Crawford and A.L. Prometio, 1979. Break down of Douglas-fir phloem by a lignocellulose-degrading Streptomyces. Curr. Microbiol., 2: 123-126.
39. Tsao, P.H., C. Leben and G.W. Keitt, 1960. An enrichment method for isolating actinomycetes that produce diffusable antifungal antibiotics. Phytopathology, 50: 88-89.
40. Tsujibo, H., T. Sakamoto, N. Nishino, T. Hasegawa and Y. Inamori, 1990. Purification and properties of three types of xylanases produced by an alkalophilic actinomycete. J. Appl Bacteriol., 69: 398-405.
41. Wachinger, G., K. Bronnenmeier, W.L. Staudenbauer and H. Schrempf, 1989. Identification of myceliumassociated cellulase from Streptomyces reticuli. Applied Environ. Microbiol., 55: 2653-2657.
42. Williams, J.G.K., A.R. Kubelik, K.J. Livak, J.A. Rafalski, and S.V. Tingey, 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucl Acids Res., 18: 6531-6535.
43. Williams, S.T., M. Shameemullah, E.T. Watson and C.I. Mayfield, 1972. Studies on the ecology of actinomycetes in soil VI. The influence of moisture tension on growth and survival. Soil Biol. Biochem., 4:215-225.