Molecular diversity of tobacco vein banding mosaic virus

Archives of Virology

Volumn 152, Issue 10, 2007, Pages 1911-1915

  Tian, Y P ^a,b   Liu, J L ^a   Yu, X Q ^a   Lei, L P ^c   Zhu, X P ^a   Valkonen, J P T ^b,d   Li, X D ^a  

^a SHANDONG AGRICULTURAL UNIVERSITY   (China)

^b SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^c Yunnan Tobacco Institute   (China)

^d UNIVERSITY OF HELSINKI   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS PROTEIN; VIRUS RNA;

3' UNTRANSLATED REGION; AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CLUSTER ANALYSIS; DNA SEQUENCE; GENETIC VARIABILITY; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; MOLECULAR WEIGHT; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; PLASMID; POLYMERASE CHAIN REACTION; POTYVIRUS; PROTEIN MOTIF; SEQUENCE HOMOLOGY; TOBACCO; VIROLOGY; VIRUS GENE;

3' UNTRANSLATED REGIONS; AMINO ACID MOTIFS; AMINO ACID SEQUENCE; BASE SEQUENCE; CLUSTER ANALYSIS; CONSERVED SEQUENCE; GENES, VIRAL; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; OPEN READING FRAMES; PHYLOGENY; PLASMIDS; POLYMERASE CHAIN REACTION; POTYVIRUS; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; TOBACCO; VARIATION (GENETICS); VIRAL PROTEINS;

NICOTIANA TABACUM; TOBACCO VEIN BANDING MOSAIC VIRUS;

EID: 34848836118     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-007-1020-3     Document Type: Article

References (22)

1. MJ Adams JF Antoniw 2005 DPVweb: an open access internet resource on plant viruses and virus diseases Outlooks Pest Manag 16 268 270
2. MJ Adams JF Antoniw F Beaudoin 2005 Overview and analysis of the polyprotein cleavage sites in the family Potyviridae Mol Plant Pathol 6 471 487
3. MJ Adams JF Antoniw CM Fauquet 2005 Molecular criteria for genus and species discrimination within the family Potyviridae Arch Virol 150 459 479
4. Brunt AA, Crabtree K, Dallwitz MJ, Gibbs AJ, Watson L, Zurcher EJ (eds) (1996 onwards) Plant viruses online: descriptions and lists from the VIDE database
5. BY Chang CR Huang SD Yeh JK Chiang LM Hung HY Hu 1994 Nucleotide-sequence of the coat protein-coding region of the potyvirus Tobacco vein-banding mosaic virus Arch Virol 138 17 25
6. ER Chare EC Holmes 2006 A phylogenetic survey of recombination frequency in plant RNA viruses Arch Virol 151 933 946
7. J Chen J Chen MJ Adams 2001 A universal PCR primer to detect members of the Potyviridae and its use to examine the taxonomic status of several members of the family Arch Virol 146 757 766
8. WT Chin 1966 A survey of tobacco mosaic viruses in central Taiwan J Agric Ass Chin 55 85 88
9. WT Chin 1975 Symptomatological study of Tobacco vein-banding mosaic virus on tobacco plant Bull Taiwan Tob Res Inst 3 65 70
10. WT Chin 1980 Relation of aphid populations on field spread of Tobacco vein-banding mosaic virus in Taichung Bull Taiwan Tob Res Inst 12 57 63
11. CE Dean F Clark 1968 Vein-banding on tobacco in North Florida Plant Dis Rep 52 887 889
12. Z Fan H Chen S Cai C Deng W Wang X Liang H Li 2003 Molecular characterization of a distinct potyvirus from whitegrass in China Arch Virol 148 1219 1224
13. LF Habera PH Berger BB Reddick 1994 Molecular evidence from 3′-terminus sequence-analysis that Tobacco vein-banding mosaic virus is a distinct member of the Potyvirus group Arch Virol 138 27 38
14. DP Martin D Posada C William 2005 RDP2: recombination detection and analysis from sequence alignments Bioinformatics 21 260 262
15. BB Reddick MH Collins-Shepard RG Christie GV Gooding 1992 A new virus-disease in North-America caused by Tobacco vein-banding mosaic virus Plant Dis 76 856 859
16. JL Riechmann S Lain JA Garcia 1992 Highlights and prospects of potyvirus molecular biology J Gen Virol 73 1 16
17. P Roggero GP Accotto M Ciuffo R Lenzi C Desbiez H Lecoq D Bosco X Huang Q Gu 2000 First report of Tobacco vein banding mosaic virus in China (Xian, Shaanxi Province) in Datura stramonium and tobacco Plant Dis 84 1152
18. HD Shew GB Lucas 1991 Compendium of tobacco diseases APS Press St. Paul, MN P46
19. JD Thompson DG Higgins TJ Gibson 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673 4680
20. GF Weiller 1998 Phylogenetic profiles: a graphical method for detecting genetic recombinations in homologous sequences Mol Biol Evol 15 326 335
21. ZK Zhang Y Li 2001 Plant viruses in Yunnan Province Scientific Press Beijing 46 49
22. XC Zhu Y Wang Z Wang 2002 Tobacco diseases of China Chin Agricult Press Beijing 191 259