A universal PCR primer to detect members of the Potyviridae and its use to examine the taxonomic status of several members of the family

Archives of Virology

Volumn 146, Issue 4, 2001, Pages 757-766

  Chen, J ^a,b,b   Adams, M J ^c  

^a ZHEJIANG UNIVERSITY   (China)

^b INSTITUTE OF PLANT PROTECTION AND MICROBIOLOGY   (China)

^c Plant Pathology Department   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BEAN COMMON MOSAIC VIRUS; BROME STREAK MOSAIC VIRUS; CELERY MOSAIC VIRUS; CHINA; CONSENSUS SEQUENCE; GENE SEQUENCE; GENETIC STRAIN; MOLECULAR SIZE; OAT NECROTIC MOTTLE VIRUS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SOYBEAN MOSAIC VIRUS; TERMINAL SEQUENCE; VIRUS DETECTION; VIRUS GENOME; VIRUS INFECTION;

APIACEAE; AVENA SATIVA; CHINA; CONSENSUS SEQUENCE; GARLIC; MOSAIC VIRUSES; PHYLOGENY; PLANT DISEASES; PLANTS, MEDICINAL; POTYVIRIDAE; POTYVIRUS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA; RNA, VIRAL; ZEA MAYS;

ALLIUM CEPA; ALLIUM SATIVUM; APIUM GRAVEOLENS VAR. DULCE; BEAN COMMON MOSAIC VIRUS; BRASSICA RAPA SUBSP. RAPA; BROME STREAK MOSAIC VIRUS; BROMUS; CELERY MOSAIC VIRUS; GLYCINE MAX; LACTUCA; LETTUCE MOSAIC VIRUS; OAT NECROTIC MOTTLE VIRUS; ONION YELLOW DWARF VIRUS; PHASEOLUS (ANGIOSPERM); POTYVIRIDAE; POTYVIRUS; RYMOVIRUS; SACCHARUM HYBRID CULTIVAR; SOYBEAN MOSAIC VIRUS; SUGARCANE MOSAIC VIRUS; TRITICUM AESTIVUM; TRITIMOVIRUS; TURNIP MOSAIC VIRUS; WHEAT YELLOW MOSAIC VIRUS; ZEA MAYS;

EID: 0035003887     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s007050170144     Document Type: Article

References (21)

1. Alberts E, Francki RIB, Dietzgen RG (1989) An epidemic of celery mosaic virus in South Australian celery. Austr J Agric Res 40: 1027-1036
2. Badge JL, Kashiwazaki S, Lock S, Foster GD (1997) A bymovirus PCR primer and partial nucleotide sequence provides further evidence for recognition of rice necrosis mosaic virus as a bymovirus. Eur J Plant Pathol 103: 721-724
3. Bos L, Mandersloot HJ, Vader F, Steenbergen B (1989) An epidemic of celery mosaic potyvirus in celeriac (Apium graveolens var. rapaceum) in the Netherlands. Neth J Plant Pathol 95: 225-240
4. Chen J, Chen J, Du J, Adams MJ (2000) Sequence diversity in the coat protein coding region of wheat yellow mosaic bymovirus isolates from China. J Phytopathol 148: 515-521
5. Edwardson JR, Christie RG (1996) Cylindrical inclusions. Bull Agric Exp Sta Univ Fl no. 894
6. Felsenstein J (1993) PHYLIP (Phylogeny Inference Package) version 3.57c. Distributed by the author. Department of Genetics, University of Washington, Seattle
7. Genetics Computer Group (1994) Program manual for the Wisconsin Package version 8. Madison, Wisconsin
8. Gibbs A, Mackenzie A (1997) A primer pair for amplifying part of the genome of all potyvirids by RT-PCR. J Virol Methods 63: 9-16
9. Gill CC (1976) Oat necrotic mottle virus. CMI/AAB Descriptions of Plant Viruses No. 169
10. Gotz R, Maiss E (1995) The complete nucleotide sequence and genome organization of the mite-transmitted brome streak mosaic rymovirus in comparison with those of potyviruses. J Gen Virol 76: 2035-2042
11. Langeveldt SA, Dore J-M, Memelink J, Derks AFLM, van der Vlugt CIM, Asjes CJ, Bol JF (1991) Identification of potyviruses using the polymerase chain reaction with degenerate primers. J Gen Virol 72: 1531-1541
12. Milicic D, Mamula D, Plazibat M (1982) Some properties of brome streak mosaic virus. Acta Botanica Croatica 41:7-12
13. Pappu SS, Brand R, Pappu HR, Rybicki EP, Gough KH, Frenkel MJ, Niblett CL (1993) A polymerase chain reaction method adapted for selective amplification and cloning of 3′ sequences of potyviral genomes: application to dasheen mosaic virus. J Virol Methods 41: 9-20
14. Purcifull D, Gonsalves D (1985) Blackeye cowpea mosaic virus. CMI/AAB Descriptions of Plant Viruses No. 305
15. Sai J, Kang L, Huang Z, Shi C, Tian B, Xie Y (1995) Nucleotide sequence of maize dwarf mosaic virus capsid protein gene and its expression in Escherichia coli. Sci China B 38: 313-319
16. Schubert J, Rabenstein F (1995) Sequence of the 3′-terminal region of the RNA of a mite transmitted potyvirus from Hordeum murinum L. Eur J Plant Pathol 101: 123-132
17. Shepard JF, Grogan RG (1971) Celery mosaic virus. CMI/AAB Descriptions of Plant Viruses No. 50
18. Shukla DD, Ward CW, Brunt AA (1994) The Potyviridae. CAB International, Wallingford
19. Shukla DD, Ward CW, Brunt AA, Berger PH (1998) Potyviridae family. AAB Descriptions of Plant Viruses No. 366
20. Tsuneyoshi T, Matsumi T, Natsuaki KT, Sumi S (1998) Nucleotide sequence analysis of virus isolates indicates the presence of three potyvirus species in Allium plants. Arch Virol 143: 97-113
21. Ward CW, Shukla DD (1991) Taxonomy of potyviruses - current problems and some solutions. Intervirology 32: 269-296