-
1
-
-
0038700698
-
Molecular views of recombination proteins and their control
-
West,S.C. (2003) Molecular views of recombination proteins and their control. Nat. Rev. Mol. Cell Biol., 4, 435-445.
-
(2003)
Nat. Rev. Mol. Cell Biol
, vol.4
, pp. 435-445
-
-
West, S.C.1
-
2
-
-
4143079350
-
Homologous recombination: Down to the wire
-
Wyman,C. and Kanaar,R. (2004) Homologous recombination: Down to the wire. Curr. Biol, 14, R629-R631.
-
(2004)
Curr. Biol
, vol.14
-
-
Wyman, C.1
Kanaar, R.2
-
3
-
-
3543041245
-
Crystal structure of a Rad51 filament
-
Conway,A.B., Lynch,T.W., Zhang,Y., Fortin,G.S., Fung,C.W., Symington,L.S. and Rice,P.A. (2004) Crystal structure of a Rad51 filament. Nat. Struct. Mol. Biol., 11, 791-796.
-
(2004)
Nat. Struct. Mol. Biol
, vol.11
, pp. 791-796
-
-
Conway, A.B.1
Lynch, T.W.2
Zhang, Y.3
Fortin, G.S.4
Fung, C.W.5
Symington, L.S.6
Rice, P.A.7
-
4
-
-
0035902614
-
Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA
-
S
-
Yu,X., Jacobs,S.A., West,S.C., Ogawa,T. and Egelman,E.H. (2001) Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA. Proc. Natl Acad. Sci. USA, 98, 8419-8424.S
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 8419-8424
-
-
Yu, X.1
Jacobs, S.A.2
West, S.C.3
Ogawa, T.4
Egelman, E.H.5
-
5
-
-
1642319679
-
What is the structure of the RecA-DNA filament?
-
Yu,X., VanLoock,M.S., Yang,S., Reese,J.T. and Egelman,E.H. (2004) What is the structure of the RecA-DNA filament? Curr. Protein Pept. Sc. 5, 73-79.
-
(2004)
Curr. Protein Pept. Sc
, vol.5
, pp. 73-79
-
-
Yu, X.1
VanLoock, M.S.2
Yang, S.3
Reese, J.T.4
Egelman, E.H.5
-
6
-
-
20844461121
-
Human Rad51 filaments on double- and single-stranded DNA: Correlating regular and irregular forms with recombination function
-
Ristic,D., Modesti,M., van der Heijden,T., van Noort,J., Dekker,C., Kanaar,R. and Wyman,C. (2005) Human Rad51 filaments on double- and single-stranded DNA: Correlating regular and irregular forms with recombination function. Nucleic Acids Res., 33, 3292-3302.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 3292-3302
-
-
Ristic, D.1
Modesti, M.2
van der Heijden, T.3
van Noort, J.4
Dekker, C.5
Kanaar, R.6
Wyman, C.7
-
7
-
-
0037313864
-
ATP-Mediated conformational changes in the RecA filament
-
VanLoock,M.S., Yu,X., Yang,S.X., Lai,A.L., Low,C., Campbell,M.J. and Egelman,E.H. (2003) ATP-Mediated conformational changes in the RecA filament. Structure, 11, 187-196.
-
(2003)
Structure
, vol.11
, pp. 187-196
-
-
VanLoock, M.S.1
Yu, X.2
Yang, S.X.3
Lai, A.L.4
Low, C.5
Campbell, M.J.6
Egelman, E.H.7
-
8
-
-
0027167689
-
Similarity of the yeast Rad51 filament to the bacterial RecA filament
-
Ogawa,T., Yu,X., Shinohara,A. and Egelman,E.H. (1993) Similarity of the yeast Rad51 filament to the bacterial RecA filament. Science, 259, 1896-1899.
-
(1993)
Science
, vol.259
, pp. 1896-1899
-
-
Ogawa, T.1
Yu, X.2
Shinohara, A.3
Egelman, E.H.4
-
9
-
-
0028072098
-
Purification and characterization of the human Rad51 protein, an analog of Escherichia coli RecA
-
Benson,F.E., Stasiak,A. and West,S.C. (1994) Purification and characterization of the human Rad51 protein, an analog of Escherichia coli RecA. EMBO J., 13, 5764-5771.
-
(1994)
EMBO J
, vol.13
, pp. 5764-5771
-
-
Benson, F.E.1
Stasiak, A.2
West, S.C.3
-
10
-
-
0029112483
-
DNA strand exchange mediated by a Rad51-ssdna nucleoprotein filament with polarity opposite to that of RecA
-
Sung,P. and Robberson,D.L. (1995) DNA strand exchange mediated by a Rad51-ssdna nucleoprotein filament with polarity opposite to that of RecA. Cell, 82, 453-461.
-
(1995)
Cell
, vol.82
, pp. 453-461
-
-
Sung, P.1
Robberson, D.L.2
-
11
-
-
17544379313
-
Torque-limited RecA polymerization on dsDNA
-
van der Heijden,T., van Noort,J., van Leest,H., Kanaar,R., Wyman,C., Dekker,N. and Dekker,C. (2005) Torque-limited RecA polymerization on dsDNA. Nucleic Acids Res., 33, 2099-2105.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 2099-2105
-
-
van der Heijden, T.1
van Noort, J.2
van Leest, H.3
Kanaar, R.4
Wyman, C.5
Dekker, N.6
Dekker, C.7
-
12
-
-
0033529216
-
RecA polymerization on double-stranded DNA by using single-molecule manipulation: The role of ATP hydrolysis
-
Shivashankar,G.V., Feingold,M., Kricheysky,O. and Libchaber,A. (1999) RecA polymerization on double-stranded DNA by using single-molecule manipulation: The role of ATP hydrolysis. Proc. Natl Acad. Sci. USA 96, 7916-7921.
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 7916-7921
-
-
Shivashankar, G.V.1
Feingold, M.2
Kricheysky, O.3
Libchaber, A.4
-
13
-
-
0030633568
-
RecA protein: Structure, function, and role in recombinational DNA repair
-
Roca,A.I. and Cox,M.M. (1997) RecA protein: Structure, function, and role in recombinational DNA repair. Prog. Nucleic Acid Res. Mol. Biol., 56, 129-223.
-
(1997)
Prog. Nucleic Acid Res. Mol. Biol
, vol.56
, pp. 129-223
-
-
Roca, A.I.1
Cox, M.M.2
-
14
-
-
33750296934
-
Direct observation of individual RecA filaments assembling on single DNA molecules
-
Galletto,R., Amitani,I., Baskin,R.J. and Kowalczykowski,S.C. (2006) Direct observation of individual RecA filaments assembling on single DNA molecules. Nature, 443, 875-878.
-
(2006)
Nature
, vol.443
, pp. 875-878
-
-
Galletto, R.1
Amitani, I.2
Baskin, R.J.3
Kowalczykowski, S.C.4
-
15
-
-
33746713745
-
Real-time observation of RecA filament dynamics with single monomer resolution
-
Joo,C., McKinney,S.A., Nakamura,M., Rasnik,I., Myong,S. and Ha,T. (2006) Real-time observation of RecA filament dynamics with single monomer resolution. Cell, 126, 515-527.
-
(2006)
Cell
, vol.126
, pp. 515-527
-
-
Joo, C.1
McKinney, S.A.2
Nakamura, M.3
Rasnik, I.4
Myong, S.5
Ha, T.6
-
16
-
-
1642264199
-
Conformational changes modulate the activity of human RAD51 protein
-
Liu,Y.L., Stasiak,A.Z., Mcllwraith,M.J., Stasiak,A. and West,S.C. (2004) Conformational changes modulate the activity of human RAD51 protein. J. Mol. Biol., 337, 817-827.
-
(2004)
J. Mol. Biol
, vol.337
, pp. 817-827
-
-
Liu, Y.L.1
Stasiak, A.Z.2
Mcllwraith, M.J.3
Stasiak, A.4
West, S.C.5
-
17
-
-
0033527668
-
The hRad51 and RecA proteins show significant differences in cooperative binding to single-stranded DNA
-
De Zutter,S.K. and Knight,K.L. (1999) The hRad51 and RecA proteins show significant differences in cooperative binding to single-stranded DNA. J. Mol. Biol., 293, 769-780.
-
(1999)
J. Mol. Biol
, vol.293
, pp. 769-780
-
-
De Zutter, S.K.1
Knight, K.L.2
-
18
-
-
3042791448
-
2+ activates human homologous recombination protein Rad51 by modulating its ATPase activity
-
2+ activates human homologous recombination protein Rad51 by modulating its ATPase activity. Proc. Natl Acad. Sci. USA, 101, 9988-9993.
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 9988-9993
-
-
Bugreev, D.V.1
Mazin, A.V.2
-
19
-
-
0031895463
-
Behavior of supercoiled DNA
-
Strick,T.R., Allemand,J.F., Bensimon,D. and Croquette,V. (1998) Behavior of supercoiled DNA. Biophys. J., 74, 2016-2028.
-
(1998)
Biophys. J
, vol.74
, pp. 2016-2028
-
-
Strick, T.R.1
Allemand, J.F.2
Bensimon, D.3
Croquette, V.4
-
20
-
-
2342454974
-
Dual architectural roles of HU: Formation of flexible hinges and rigid filaments
-
van Noort,J., Verbrugge,S., Goosen,N., Dekker,C. and Dame,R.T. (2004) Dual architectural roles of HU: Formation of flexible hinges and rigid filaments. Proc. Natl Acad. Sci. USA, 101, 6969-6974.
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 6969-6974
-
-
van Noort, J.1
Verbrugge, S.2
Goosen, N.3
Dekker, C.4
Dame, R.T.5
-
21
-
-
0034088461
-
Two time constants for the binding of proteins to DNA from micromechanical data
-
Turner,M.S. (2000) Two time constants for the binding of proteins to DNA from micromechanical data. Biophys. J., 78, 600-607.
-
(2000)
Biophys. J
, vol.78
, pp. 600-607
-
-
Turner, M.S.1
-
23
-
-
0035812601
-
Comparison of bacteriophage T4 UvsX and human Rad51 filaments suggests that RecA-like polymers may have evolved independently
-
Yang,S.X., VanLoock,M.S., Yu,X. and Egelman,E.H. (2001) Comparison of bacteriophage T4 UvsX and human Rad51 filaments suggests that RecA-like polymers may have evolved independently. J. Mol. Biol., 312, 999-1009.
-
(2001)
J. Mol. Biol
, vol.312
, pp. 999-1009
-
-
Yang, S.X.1
VanLoock, M.S.2
Yu, X.3
Egelman, E.H.4
-
24
-
-
32644466860
-
Roles of ATP binding and ATP hydrolysis in human Rad51 recombinase function
-
Chi,P., Van Komen,S., Sehorn,M.G., Sigurdsson,S. and Sung,P. (2006) Roles of ATP binding and ATP hydrolysis in human Rad51 recombinase function. DNA Repair, 5, 381-391.
-
(2006)
DNA Repair
, vol.5
, pp. 381-391
-
-
Chi, P.1
Van Komen, S.2
Sehorn, M.G.3
Sigurdsson, S.4
Sung, P.5
-
25
-
-
0032513226
-
Binding of Rad51p to DNA - interaction of Rad51p with single- and double-stranded DNA
-
Namsaraev,E.A. and Berg,P. (1998) Binding of Rad51p to DNA - interaction of Rad51p with single- and double-stranded DNA. J. Biol. Chem., 273, 6177-6182.
-
(1998)
J. Biol. Chem
, vol.273
, pp. 6177-6182
-
-
Namsaraev, E.A.1
Berg, P.2
-
26
-
-
0030768931
-
The Hill equation revisited: Uses and misuses
-
Weiss,J.N. (1997) The Hill equation revisited: Uses and misuses. FASEB J., 11, 835-841.
-
(1997)
FASEB J
, vol.11
, pp. 835-841
-
-
Weiss, J.N.1
-
27
-
-
34247859194
-
Fluorescent human RAD51 reveals multiple nucleation sites and filaments segments tightly associated along a single DNA molecule
-
Modesti,M., Ristic,D., van der Heijden,T., Dekker,C., van Mameren,J., Peterman,E.J.G., Wuite,G.J.L., Kanaar,R. and Wyman,C. (2007) Fluorescent human RAD51 reveals multiple nucleation sites and filaments segments tightly associated along a single DNA molecule. Structure, 15 599-609.
-
(2007)
Structure
, vol.15
, pp. 599-609
-
-
Modesti, M.1
Ristic, D.2
van der Heijden, T.3
Dekker, C.4
van Mameren, J.5
Peterman, E.J.G.6
Wuite, G.J.L.7
Kanaar, R.8
Wyman, C.9
-
28
-
-
0037177845
-
Biochemical characterization of the human RAD51 protein - II. Adenosine nucleotide binding and competition
-
Tombline,G., Shim,K.S. and Fishel,R. (2002) Biochemical characterization of the human RAD51 protein - II. Adenosine nucleotide binding and competition. J. Biol. Chem., 277, 14426-14433.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 14426-14433
-
-
Tombline, G.1
Shim, K.S.2
Fishel, R.3
-
29
-
-
0032937079
-
Estimating the persistence length of a worm-like chain molecule from force-extension measurements
-
Bouchiat,C., Wang,M.D., Allemand,J.F., Strick,T., Block,S.M. and Croquette,V. (1999) Estimating the persistence length of a worm-like chain molecule from force-extension measurements. Biophys. J., 76, 409-413.
-
(1999)
Biophys. J
, vol.76
, pp. 409-413
-
-
Bouchiat, C.1
Wang, M.D.2
Allemand, J.F.3
Strick, T.4
Block, S.M.5
Croquette, V.6
-
30
-
-
0033621088
-
Polymerization and mechanical properties of single RecA-DNA filaments
-
Hegner,M., Smith,S.B. and Bustamante,C. (1999) Polymerization and mechanical properties of single RecA-DNA filaments. Proc. Natl Acad. Sci. USA, 96, 10109-10114.
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 10109-10114
-
-
Hegner, M.1
Smith, S.B.2
Bustamante, C.3
-
31
-
-
33749522198
-
Dissecting elastic heterogeneity along DNA molecules coated partly with Rad51 using concurrent fluorescence microscopy and optical tweezers
-
van Mameren,J., Modesti,M., Kanaar,R., Wyman,C., Wuite,G.J.L. and Peterman,E.J.G. (2006) Dissecting elastic heterogeneity along DNA molecules coated partly with Rad51 using concurrent fluorescence microscopy and optical tweezers. Biophys. J., 91, L78-L80.
-
(2006)
Biophys. J
, vol.91
-
-
van Mameren, J.1
Modesti, M.2
Kanaar, R.3
Wyman, C.4
Wuite, G.J.L.5
Peterman, E.J.G.6
-
32
-
-
31944435731
-
Long-distance lateral diffusion of human Rad51 on double-stranded DNA
-
Granéli,A., Yeykal,C.C., Robertson,R.B. and Greene,E.C. (2006) Long-distance lateral diffusion of human Rad51 on double-stranded DNA. Proc. Natl Acad. Sci. USA, 103, 1221-1226.
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 1221-1226
-
-
Granéli, A.1
Yeykal, C.C.2
Robertson, R.B.3
Greene, E.C.4
-
33
-
-
0034711381
-
Reconstitution of the strand invasion step of double-strand break repair using human Rad51 Rad52 and RPA proteins
-
McIlwraith,M.J., Van Dyck,E., Masson,J.Y., Stasiak,A.Z., Stasiak,A. and West,S.C. (2000) Reconstitution of the strand invasion step of double-strand break repair using human Rad51 Rad52 and RPA proteins. J. Mol. Biol., 304, 151-164.
-
(2000)
J. Mol. Biol
, vol.304
, pp. 151-164
-
-
McIlwraith, M.J.1
Van Dyck, E.2
Masson, J.Y.3
Stasiak, A.Z.4
Stasiak, A.5
West, S.C.6
-
34
-
-
0030811492
-
Purification of human Rad51 protein by selective spermidine precipitation
-
Baumann,P., Benson,F.E., Hajibagheri,N. and West,S.C. (1997) Purification of human Rad51 protein by selective spermidine precipitation. Mutat. Res. DNA Repair, 384, 65-72.
-
(1997)
Mutat. Res. DNA Repair
, vol.384
, pp. 65-72
-
-
Baumann, P.1
Benson, F.E.2
Hajibagheri, N.3
West, S.C.4
-
35
-
-
0037177859
-
Biochemical characterization of the human RAD51 protein - III. - Modulation of DNA binding by adenosine nucleotides
-
Tombline,G., Heinen,C.D., Shim,K.S. and Fishel,R. (2002) Biochemical characterization of the human RAD51 protein - III. - Modulation of DNA binding by adenosine nucleotides. J. Biol. Chem., 277, 14434-14442.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 14434-14442
-
-
Tombline, G.1
Heinen, C.D.2
Shim, K.S.3
Fishel, R.4
-
36
-
-
0042738069
-
-
Shin,D.S., Pellegrini,L., Daniels,D.S., Yelent,B., Craig,L., Bates,D., Yu,D.S., Shivji,M.K., Hitomi, and C., (2003) Full-length archaeal Rad51 structure and mutants: Mechanisms for RAD51 assembly and control by BRCA2. EMBO J., 22, 4566-4576.
-
Shin,D.S., Pellegrini,L., Daniels,D.S., Yelent,B., Craig,L., Bates,D., Yu,D.S., Shivji,M.K., Hitomi, and C., (2003) Full-length archaeal Rad51 structure and mutants: Mechanisms for RAD51 assembly and control by BRCA2. EMBO J., 22, 4566-4576.
-
-
-
-
37
-
-
33845604556
-
DNA double-strand break repair: All's well that ends well
-
Wyman,C. and Kanaar,R. (2006) DNA double-strand break repair: All's well that ends well. Annu. Rev. Genet., 40, 363-383.
-
(2006)
Annu. Rev. Genet
, vol.40
, pp. 363-383
-
-
Wyman, C.1
Kanaar, R.2
-
38
-
-
34249878748
-
Stabilization of RAD51 nucleoprotein filaments by the C-terminal region of BRCA2
-
Esashi,F., Galkin,V.E., Yu,X., Egelman,E.H. and West,S.C. (2007) Stabilization of RAD51 nucleoprotein filaments by the C-terminal region of BRCA2. Nat. Struct. Mol. Biol., 14, 468-474.
-
(2007)
Nat. Struct. Mol. Biol
, vol.14
, pp. 468-474
-
-
Esashi, F.1
Galkin, V.E.2
Yu, X.3
Egelman, E.H.4
West, S.C.5
-
39
-
-
34249887673
-
Interaction with the BRCA2 C terminus protects RAD51-DNA filaments from disassembly by BRC repeats
-
Davies,O.R. and Pellegrini,L. (2007) Interaction with the BRCA2 C terminus protects RAD51-DNA filaments from disassembly by BRC repeats. Nat. Struct. Mol. Biol., 14, 475-483.
-
(2007)
Nat. Struct. Mol. Biol
, vol.14
, pp. 475-483
-
-
Davies, O.R.1
Pellegrini, L.2
-
40
-
-
34249892132
-
Stabilization of RAD-51-DNA filaments via an interaction domain in Caenorhabditis elegans BRCA2
-
Petalcorin,M.I., Galkin,V.E., Yu,X., Egelman,E.H. and Boulton,S.J. (2007) Stabilization of RAD-51-DNA filaments via an interaction domain in Caenorhabditis elegans BRCA2. Proc. Natl Acad. Sci. USA, 104 8299-8304.
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 8299-8304
-
-
Petalcorin, M.I.1
Galkin, V.E.2
Yu, X.3
Egelman, E.H.4
Boulton, S.J.5
-
41
-
-
3242878504
-
DNA recombination, chromosomal stability and carcinogenesis: Insights into the role of BRCA2
-
Shivji,M.K.K. and Venkitaraman,A.R. (2004) DNA recombination, chromosomal stability and carcinogenesis: Insights into the role of BRCA2. DNA Repair, 3, 835-843.
-
(2004)
DNA Repair
, vol.3
, pp. 835-843
-
-
Shivji, M.K.K.1
Venkitaraman, A.R.2
-
42
-
-
33748681302
-
Some disassembly required: Role of DNA translocases in the disruption of recombination intermediates and dead-end complexes
-
Symington,L.S. and Heyer,W.D. (2006) Some disassembly required: Role of DNA translocases in the disruption of recombination intermediates and dead-end complexes. Genes Dev., 20, 2479-2486.
-
(2006)
Genes Dev
, vol.20
, pp. 2479-2486
-
-
Symington, L.S.1
Heyer, W.D.2
-
43
-
-
0035945241
-
Bypass of heterology during strand transfer by Saccharomyces cerevisiae Rad51 protein
-
Holmes,V.F., Benjamin,K.R., Crisona,N.J. and Cozzarelli,N.R. (2001) Bypass of heterology during strand transfer by Saccharomyces cerevisiae Rad51 protein. Nucleic Acids Res., 29, 5052-5057.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 5052-5057
-
-
Holmes, V.F.1
Benjamin, K.R.2
Crisona, N.J.3
Cozzarelli, N.R.4
-
44
-
-
0035997347
-
The bacterial RecA protein and the recombinational DNA repair of stalled replication forks
-
Lusetti,S.L. and Cox,M.M. (2002) The bacterial RecA protein and the recombinational DNA repair of stalled replication forks. Annu. Rev. Biochem., 71, 71-100.
-
(2002)
Annu. Rev. Biochem
, vol.71
, pp. 71-100
-
-
Lusetti, S.L.1
Cox, M.M.2
-
45
-
-
18744407040
-
Stretching single stranded DNA, a model polyelectrolyte
-
Dessinges,M.N., Maier,B., Zhang,Y., Peliti,M., Bensimon,D. and Croquette,V. (2002) Stretching single stranded DNA, a model polyelectrolyte. Phys. Rev. Lett., 89, 248102.
-
(2002)
Phys. Rev. Lett
, vol.89
, pp. 248102
-
-
Dessinges, M.N.1
Maier, B.2
Zhang, Y.3
Peliti, M.4
Bensimon, D.5
Croquette, V.6
|