-
3
-
-
0034602774
-
Knowledge-based analysis of microarray gene expression data by using support vector machines
-
Brown,M.P. et al. (2000) Knowledge-based analysis of microarray gene expression data by using support vector machines. Proc. Natl. Acad. Sci. USA, 97, 262-267.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 262-267
-
-
Brown, M.P.1
-
4
-
-
0030297537
-
A novel mechanism for regulating activity of a transcription factor that controls the unfolded protein response
-
Cox,J.S. and Walter,P. (1996) A novel mechanism for regulating activity of a transcription factor that controls the unfolded protein response. Cell, 87, 391-404.
-
(1996)
Cell
, vol.87
, pp. 391-404
-
-
Cox, J.S.1
Walter, P.2
-
5
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
Eisen,M.B. et al. (1998) Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. USA, 95 14863-14868.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 14863-14868
-
-
Eisen, M.B.1
-
6
-
-
33645821454
-
Assessing semantic similarity measures for the characterization of human regulatory pathways
-
Guo,X. et al. (2006) Assessing semantic similarity measures for the characterization of human regulatory pathways. Bioinformatics, 22, 967-973.
-
(2006)
Bioinformatics
, vol.22
, pp. 967-973
-
-
Guo, X.1
-
8
-
-
0346801873
-
The Gene Ontology (GO) database and informatics resource
-
Harris,M.A. et al. (2004) The Gene Ontology (GO) database and informatics resource. Nucleic Acids Res., 32, D258-D261.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Harris, M.A.1
-
9
-
-
0034767547
-
Annotation transfer for genomics: Measuring functional divergence in multi-domain proteins
-
Hegyi,H. and Gerstein,M. (2001) Annotation transfer for genomics: measuring functional divergence in multi-domain proteins. Genome Res. 11, 1632-1640.
-
(2001)
Genome Res
, vol.11
, pp. 1632-1640
-
-
Hegyi, H.1
Gerstein, M.2
-
10
-
-
0035163058
-
The Hsp70-Ydj1 molecular chaperone represses the activity of the heme activator protein Hap1 in the absence of heme
-
Hon,T. et al. (2001) The Hsp70-Ydj1 molecular chaperone represses the activity of the heme activator protein Hap1 in the absence of heme. Mol. Cell. Biol., 21, 7923-7932.
-
(2001)
Mol. Cell. Biol
, vol.21
, pp. 7923-7932
-
-
Hon, T.1
-
11
-
-
0036894656
-
Complex transcriptional circuitry at the G1/S transition in Saccharomyces cerevisiae
-
Horak,C.E. et al. (2002) Complex transcriptional circuitry at the G1/S transition in Saccharomyces cerevisiae. Genes Dev., 16, 3017-3033.
-
(2002)
Genes Dev
, vol.16
, pp. 3017-3033
-
-
Horak, C.E.1
-
13
-
-
0142052944
-
A Bayesian networks approach for predicting proteinprotein interactions from genomic data
-
Jansen,R. et al. (2003) A Bayesian networks approach for predicting proteinprotein interactions from genomic data. Science, 302, 449-453.
-
(2003)
Science
, vol.302
, pp. 449-453
-
-
Jansen, R.1
-
14
-
-
0029867572
-
EcoCyc: An encyclopedia of Escherichia coli genes and metabolism
-
Karp,P.D. et al. (1996) EcoCyc: An encyclopedia of Escherichia coli genes and metabolism. Nucleic Acids Res., 24, 32-39.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 32-39
-
-
Karp, P.D.1
-
15
-
-
0032573163
-
Folding in vivo of a newly translated yeast cytosolic enzyme is mediated by the SSA class of cytosolic yeast Hsp70 proteins
-
Kim,S. et al. (1998) Folding in vivo of a newly translated yeast cytosolic enzyme is mediated by the SSA class of cytosolic yeast Hsp70 proteins. Proc. Natl. Acad. Sci. USA, 95, 12860-12865.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 12860-12865
-
-
Kim, S.1
-
16
-
-
0029026540
-
Role of the protein chaperone YDJ1 in establishing Hsp90-mediated signal transduction pathways
-
Kimura,Y. et al. (1995) Role of the protein chaperone YDJ1 in establishing Hsp90-mediated signal transduction pathways. Science, 268, 1362-1365.
-
(1995)
Science
, vol.268
, pp. 1362-1365
-
-
Kimura, Y.1
-
17
-
-
1442275858
-
Toward a systematic definition of protein function that scales to the genome level: Defining function in terms of interactions
-
Lan,N. et al. (2002) Toward a systematic definition of protein function that scales to the genome level: Defining function in terms of interactions. Proc. IEEE, 90, 1848-1858.
-
(2002)
Proc. IEEE
, vol.90
, pp. 1848-1858
-
-
Lan, N.1
-
18
-
-
0037174671
-
Transcriptional regulatory networks in Saccharomyces cerevisiae
-
Lee,T.I. et al. (2002) Transcriptional regulatory networks in Saccharomyces cerevisiae. Science, 298, 799-804.
-
(2002)
Science
, vol.298
, pp. 799-804
-
-
Lee, T.I.1
-
19
-
-
33751393465
-
Assessing protein similarity with Gene Ontology and its use in subnuclear localization prediction
-
Lei,Z. and Dai,Y. (2006) Assessing protein similarity with Gene Ontology and its use in subnuclear localization prediction. BMC Bioinformatics 7, 491.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 491
-
-
Lei, Z.1
Dai, Y.2
-
21
-
-
0036852181
-
Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons
-
Mateos,A. et al. (2002) Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons. Genome Res., 12, 1703-1715.
-
(2002)
Genome Res
, vol.12
, pp. 1703-1715
-
-
Mateos, A.1
-
22
-
-
33644875537
-
MIPS: Analysis and annotation of proteins from whole genomes in 2005
-
Mewes,H.W. et al. (2006) MIPS: Analysis and annotation of proteins from whole genomes in 2005. Nucleic Acids Res., 34, D169-D172.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Mewes, H.W.1
-
23
-
-
0032926060
-
The CATH Database provides insights into protein structure/function relationships
-
Orengo,C.A. et al. (1999) The CATH Database provides insights into protein structure/function relationships. Nucleic Acids Res., 27, 275-279.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 275-279
-
-
Orengo, C.A.1
-
25
-
-
9044222118
-
Genes and proteins of Escherichia coli (GenProtEc)
-
Riley,M. and Space,D.B. (1996) Genes and proteins of Escherichia coli (GenProtEc). Nucleic Acids Res., 24, 40.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 40
-
-
Riley, M.1
Space, D.B.2
-
26
-
-
9144257282
-
The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes
-
Ruepp,A. et al. (2004) The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes. Nucleic Acids Res., 32, 5539-5545.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5539-5545
-
-
Ruepp, A.1
-
27
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
-
Spellman,P. et al. (1998) Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol. Biol. Cell, 9, 3273-3297.
-
(1998)
Mol. Biol. Cell
, vol.9
, pp. 3273-3297
-
-
Spellman, P.1
-
30
-
-
0034677669
-
Assessing annotation transfer for genomics: Quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores
-
Wilson,C.A. et al. (2000) Assessing annotation transfer for genomics: Quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores. J. Mol. Biol., 297, 233-249.
-
(2000)
J. Mol. Biol
, vol.297
, pp. 233-249
-
-
Wilson, C.A.1
-
31
-
-
0036649020
-
Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters
-
Wu,L.F. et al. (2002) Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters. Nat. Genet., 31, 255-265.
-
(2002)
Nat. Genet
, vol.31
, pp. 255-265
-
-
Wu, L.F.1
-
32
-
-
33646358998
-
Prediction of yeast protein-protein interaction network: Insights from the Gene Ontology and annotations
-
Wu,X. et al. (2006) Prediction of yeast protein-protein interaction network: Insights from the Gene Ontology and annotations. Nucleic Acids Res., 34, 2137-2150.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 2137-2150
-
-
Wu, X.1
|