-
1
-
-
33749150995
-
Mycobacterial transcription signals: Requirements for recognition by RNA polymerase and optimal transcriptional activity
-
Agarwal, N., and A. K. Tyagi. 2006. Mycobacterial transcription signals: requirements for recognition by RNA polymerase and optimal transcriptional activity. Nucleic Acids Res. 34:4245-4257.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 4245-4257
-
-
Agarwal, N.1
Tyagi, A.K.2
-
2
-
-
0033983325
-
Disruption of the genes encoding antigen 85A and antigen 85B of Mycobacterium tuberculosis H37Rv: Effect on growth in culture and in macrophages
-
Armitige, L. Y., C. Jagannath, A. R. Wanger, and S. J. Norris. 2000. Disruption of the genes encoding antigen 85A and antigen 85B of Mycobacterium tuberculosis H37Rv: effect on growth in culture and in macrophages. Infect. Immun. 68:767-778.
-
(2000)
Infect. Immun
, vol.68
, pp. 767-778
-
-
Armitige, L.Y.1
Jagannath, C.2
Wanger, A.R.3
Norris, S.J.4
-
3
-
-
14044254214
-
The mechanism of upstream activation in the rrnB operon of Mycobacterium smegmatis is different from the Escherichia coli paradigm
-
Arnvig, K. B., B. Copal, K. G. Papavinasasundaram, R. A. Cox, and M. J. Colston. 2005. The mechanism of upstream activation in the rrnB operon of Mycobacterium smegmatis is different from the Escherichia coli paradigm. Microbiology 151:467-473.
-
(2005)
Microbiology
, vol.151
, pp. 467-473
-
-
Arnvig, K.B.1
Copal, B.2
Papavinasasundaram, K.G.3
Cox, R.A.4
Colston, M.J.5
-
5
-
-
0034810138
-
Posttranscription initiation control of tryptophan metabolism in Bacillus subtilis by the trp RNA-binding attenuation protein (TRAP), anti-TRAP, and RNA structure
-
Babitzke, P., and P. Gollnick. 2001. Posttranscription initiation control of tryptophan metabolism in Bacillus subtilis by the trp RNA-binding attenuation protein (TRAP), anti-TRAP, and RNA structure. J. Bacteriol. 183:5795-5802.
-
(2001)
J. Bacteriol
, vol.183
, pp. 5795-5802
-
-
Babitzke, P.1
Gollnick, P.2
-
6
-
-
0035581084
-
Molecular recognition of pyr mRNA by the Bacillus subtilis attenuation regulatory protein PyrR
-
Bonner, E. R., J. N. D'Elia, B. K. Billips, and R. L. Switzer. 2001. Molecular recognition of pyr mRNA by the Bacillus subtilis attenuation regulatory protein PyrR. Nucleic Acids Res. 29:4851-4865.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 4851-4865
-
-
Bonner, E.R.1
D'Elia, J.N.2
Billips, B.K.3
Switzer, R.L.4
-
7
-
-
34248402030
-
Genome plasticity of BCG and impact on vaccine efficacy
-
Brosch, R., S. V. Gordon, T. Garnier, et al. 2007. Genome plasticity of BCG and impact on vaccine efficacy. Proc. Nat. Acad. Sci. USA 104:5596-5601.
-
(2007)
Proc. Nat. Acad. Sci. USA
, vol.104
, pp. 5596-5601
-
-
Brosch, R.1
Gordon, S.V.2
Garnier, T.3
-
8
-
-
14244250169
-
Structure of the nucleotide complex of PyrR, the pyr attenuation protein from Bacillus caldolyticus, suggests dual regulation by pyrimidine and purine nucleotides
-
Chander, P., K. M. Halbig, J. K. Miller, C. J. Fields, H. K. S. Bonner, G. K. Grabner, R. L. Switzer, and J. L. Smith. 2005. Structure of the nucleotide complex of PyrR, the pyr attenuation protein from Bacillus caldolyticus, suggests dual regulation by pyrimidine and purine nucleotides. J. Bacteriol. 187:1773-1782.
-
(2005)
J. Bacteriol
, vol.187
, pp. 1773-1782
-
-
Chander, P.1
Halbig, K.M.2
Miller, J.K.3
Fields, C.J.4
Bonner, H.K.S.5
Grabner, G.K.6
Switzer, R.L.7
Smith, J.L.8
-
9
-
-
0032508046
-
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
-
Cole, S. T., R. Brosch, J. Parkhill, et al. 1998. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393:537-544.
-
(1998)
Nature
, vol.393
, pp. 537-544
-
-
Cole, S.T.1
Brosch, R.2
Parkhill, J.3
-
10
-
-
0029159816
-
Activity of mycobacterial promoters during intracellular and extracellular growth
-
Dellagostin, O. A., G. Esposito, L. J. Eales, J. W. Dale, and J. McFadden. 1995. Activity of mycobacterial promoters during intracellular and extracellular growth. Microbiology 141:1785-1792.
-
(1995)
Microbiology
, vol.141
, pp. 1785-1792
-
-
Dellagostin, O.A.1
Esposito, G.2
Eales, L.J.3
Dale, J.W.4
McFadden, J.5
-
11
-
-
0030934761
-
The trp RNA-binding attenuation protein regulates TrpG synthesis by binding to the trpG ribosome binding site of Bacillus subtilis
-
Du, H., R. Tarpey, and P. Babitzke. 1997. The trp RNA-binding attenuation protein regulates TrpG synthesis by binding to the trpG ribosome binding site of Bacillus subtilis. J. Bacteriol. 179:2582-2586.
-
(1997)
J. Bacteriol
, vol.179
, pp. 2582-2586
-
-
Du, H.1
Tarpey, R.2
Babitzke, P.3
-
12
-
-
0030571479
-
Structure and organisation of the pyrimidine biosynthesis pathway genes in Lactobacillus plantarum: A PCR strategy for sequencing without cloning
-
Elagöz, A., A. Abdi, J.-C. Hubert, and B. Kammerer. 1996. Structure and organisation of the pyrimidine biosynthesis pathway genes in Lactobacillus plantarum: a PCR strategy for sequencing without cloning. Gene 182:37-43.
-
(1996)
Gene
, vol.182
, pp. 37-43
-
-
Elagöz, A.1
Abdi, A.2
Hubert, J.-C.3
Kammerer, B.4
-
13
-
-
0344527946
-
The Enterococcus faecalis pyr operon is regulated by autogenous transcriptional attenuation at a single site in the 5′ leader
-
Ghim, S.-Y., C. C. Kim, E. R. Bonner, J. N. D'Elia, G. K. Grabner, and R. L. Switzer. 1999. The Enterococcus faecalis pyr operon is regulated by autogenous transcriptional attenuation at a single site in the 5′ leader. J. Bacteriol. 181:1324-1329.
-
(1999)
J. Bacteriol
, vol.181
, pp. 1324-1329
-
-
Ghim, S.-Y.1
Kim, C.C.2
Bonner, E.R.3
D'Elia, J.N.4
Grabner, G.K.5
Switzer, R.L.6
-
14
-
-
0028244407
-
The pyrimidine biosynthesis operon of the thermophile Bacillus caldolyticus includes genes for uracil phosphoribosyltransferase and uracil permease
-
Ghim, S.-Y., and J. Neuhard. 1994. The pyrimidine biosynthesis operon of the thermophile Bacillus caldolyticus includes genes for uracil phosphoribosyltransferase and uracil permease. J. Bacteriol. 176:3698-3707.
-
(1994)
J. Bacteriol
, vol.176
, pp. 3698-3707
-
-
Ghim, S.-Y.1
Neuhard, J.2
-
15
-
-
0033026248
-
Enhanced gene replacement in mycobacteria
-
Hinds, J., E. Mahenthiralingam, K. E. Kempsell, K. Duncan, R. W. Stokes, T. Parish, and N. G. Stoker. 1999. Enhanced gene replacement in mycobacteria. Microbiology 145:519-527.
-
(1999)
Microbiology
, vol.145
, pp. 519-527
-
-
Hinds, J.1
Mahenthiralingam, E.2
Kempsell, K.E.3
Duncan, K.4
Stokes, R.W.5
Parish, T.6
Stoker, N.G.7
-
16
-
-
0032575051
-
A broad-host-range F1p-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: Application for isolation of unmarked Pseudomonas aeruginosa mutants
-
Hoang, T. T., R. R. Karkhoff-Schweizer, A. J. Kutchma, and H. P. Schweizer. 1998. A broad-host-range F1p-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: application for isolation of unmarked Pseudomonas aeruginosa mutants. Gene 212:77-86.
-
(1998)
Gene
, vol.212
, pp. 77-86
-
-
Hoang, T.T.1
Karkhoff-Schweizer, R.R.2
Kutchma, A.J.3
Schweizer, H.P.4
-
17
-
-
0030447704
-
Transcriptional attenuation of the Bacillus subtilis pyr operon by the PyrR regulatory protein and uridine nucleotides in vitro
-
Lu, Y., and R. L. Switzer. 1996. Transcriptional attenuation of the Bacillus subtilis pyr operon by the PyrR regulatory protein and uridine nucleotides in vitro. J. Bacteriol. 178:7206-7211.
-
(1996)
J. Bacteriol
, vol.178
, pp. 7206-7211
-
-
Lu, Y.1
Switzer, R.L.2
-
18
-
-
0029855920
-
Function of the RNA secondary structures in the regulation of the Bacillus subtilis pyr operon expression
-
Lu, Y., R. J. Turner, and R. L. Switzer. 1996. Function of the RNA secondary structures in the regulation of the Bacillus subtilis pyr operon expression. Proc. Natl. Acad. Sci. USA 93:14462-14467.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 14462-14467
-
-
Lu, Y.1
Turner, R.J.2
Switzer, R.L.3
-
19
-
-
0028949103
-
Roles of the three transcriptional attenuators of the Bacillus subtilis pyrimidine biosynthetic operon in the regulation of its expression
-
Lu, Y., R. J. Turner, and R. L. Switzer. 1995. Roles of the three transcriptional attenuators of the Bacillus subtilis pyrimidine biosynthetic operon in the regulation of its expression. J. Bacteriol. 177:1315-1325.
-
(1995)
J. Bacteriol
, vol.177
, pp. 1315-1325
-
-
Lu, Y.1
Turner, R.J.2
Switzer, R.L.3
-
20
-
-
0031754134
-
The carB gene encoding the large subunit of carbamoylphosphate synthetase from Lactococcus lactis is transcribed monocistronically
-
Martinussen, J., and K. Hammer. 1998. The carB gene encoding the large subunit of carbamoylphosphate synthetase from Lactococcus lactis is transcribed monocistronically. J. Bacteriol. 180:4380-4386.
-
(1998)
J. Bacteriol
, vol.180
, pp. 4380-4386
-
-
Martinussen, J.1
Hammer, K.2
-
21
-
-
0035050038
-
The pyrimidine operon pyrRPB-carA from Lactococcus lactis
-
Martinussen, J., J. Schallert, B. Andersen, and K. Hammer. 2001. The pyrimidine operon pyrRPB-carA from Lactococcus lactis. J. Bacteriol. 183:2785-2794.
-
(2001)
J. Bacteriol
, vol.183
, pp. 2785-2794
-
-
Martinussen, J.1
Schallert, J.2
Andersen, B.3
Hammer, K.4
-
22
-
-
0024275855
-
Purification and properties of aspartate transcarbamylase from Mycobacterium smegmatis
-
Masood, R., and T. A. Venkitasubramanian. 1988. Purification and properties of aspartate transcarbamylase from Mycobacterium smegmatis. Biochim. Biophys. Acta 953:106-113.
-
(1988)
Biochim. Biophys. Acta
, vol.953
, pp. 106-113
-
-
Masood, R.1
Venkitasubramanian, T.A.2
-
23
-
-
0034823183
-
Regulation of transcription of the Bacillus subtilis pyrG gene encoding cytidine triphosphate synthetase
-
Meng, Q., and R. L. Switzer. 2001. Regulation of transcription of the Bacillus subtilis pyrG gene encoding cytidine triphosphate synthetase. J. Bacteriol. 183:5513-5522.
-
(2001)
J. Bacteriol
, vol.183
, pp. 5513-5522
-
-
Meng, Q.1
Switzer, R.L.2
-
25
-
-
14644390227
-
Repression of the pyr operon in Lactobacillus plantarum prevents its ability to grow at low carbon dioxide levels
-
Nicoloff, H., A. Elagoz, F. Arsene-Ploetze, B. Kammerer, J. Martinussen, and F. Bringel. 2005. Repression of the pyr operon in Lactobacillus plantarum prevents its ability to grow at low carbon dioxide levels. J. Bacteriol. 187:2093-2104.
-
(2005)
J. Bacteriol
, vol.187
, pp. 2093-2104
-
-
Nicoloff, H.1
Elagoz, A.2
Arsene-Ploetze, F.3
Kammerer, B.4
Martinussen, J.5
Bringel, F.6
-
26
-
-
0033880508
-
Use of a flexible cassette method to generate a double unmarked Mycobacterium tuberculosis tlyA plcABC mutant by gene replacement
-
Parish, T., and N. G. Stoker. 2000. Use of a flexible cassette method to generate a double unmarked Mycobacterium tuberculosis tlyA plcABC mutant by gene replacement. Microbiology 146:1969-1975.
-
(2000)
Microbiology
, vol.146
, pp. 1969-1975
-
-
Parish, T.1
Stoker, N.G.2
-
27
-
-
0015506189
-
Biosynthesis of Escherichia coli aspartate transcarbamylase 1. Parameters of gene expression and sequential biosynthesis of the subunits
-
Perbal, B., and G. Herve. 1972. Biosynthesis of Escherichia coli aspartate transcarbamylase 1. Parameters of gene expression and sequential biosynthesis of the subunits. J. Mol. Biol. 70:511-529.
-
(1972)
J. Mol. Biol
, vol.70
, pp. 511-529
-
-
Perbal, B.1
Herve, G.2
-
28
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular cloning: A laboratory manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
29
-
-
0037783314
-
Translational repression mechanisms in prokaryotes
-
Schlax, P. J., and D. J. Worhunsky. 2003. Translational repression mechanisms in prokaryotes. Mol. Microbiol. 48:1157-1169.
-
(2003)
Mol. Microbiol
, vol.48
, pp. 1157-1169
-
-
Schlax, P.J.1
Worhunsky, D.J.2
-
30
-
-
0027134384
-
Small broad-host-range gentamycin resistance gene cassettes for site-specific insertion and deletion mutagenesis
-
Schweizer, H. D. 1993. Small broad-host-range gentamycin resistance gene cassettes for site-specific insertion and deletion mutagenesis. BioTechniques 15:831-834.
-
(1993)
BioTechniques
, vol.15
, pp. 831-834
-
-
Schweizer, H.D.1
-
31
-
-
0025081151
-
Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis
-
Snapper, S. B., R. E. Melton, S. Mustafa, T. Kieser, and W. R. Jacobs. 1990. Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis. Mol. Microbiol. 4:1911-1919.
-
(1990)
Mol. Microbiol
, vol.4
, pp. 1911-1919
-
-
Snapper, S.B.1
Melton, R.E.2
Mustafa, S.3
Kieser, T.4
Jacobs, W.R.5
-
32
-
-
33846054258
-
Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer
-
Stinear, T. P., T. Seemann, S. Pidot, et al. 2007. Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer. Genome Res. 17:192-200.
-
(2007)
Genome Res
, vol.17
, pp. 192-200
-
-
Stinear, T.P.1
Seemann, T.2
Pidot, S.3
-
33
-
-
0032601488
-
Regulation of the Bacillus subtilis pyrimidine biosynthetic operon by transcriptional attenuation: Control of gene expression by an mRNA-binding protein
-
Switzer, R. L., R. J. Turner, and Y. Lu. 1999. Regulation of the Bacillus subtilis pyrimidine biosynthetic operon by transcriptional attenuation: control of gene expression by an mRNA-binding protein. Prog. Nucleic Acids Res. Mol. Biol. 62:329-367.
-
(1999)
Prog. Nucleic Acids Res. Mol. Biol
, vol.62
, pp. 329-367
-
-
Switzer, R.L.1
Turner, R.J.2
Lu, Y.3
-
34
-
-
0028079877
-
Escherichia coli-mycobacteria shuttle vectors for operon and gene fusions to lacZ: The pJEM series
-
Timm, J., E. M. Lim, and B. Gicquel. 1994. Escherichia coli-mycobacteria shuttle vectors for operon and gene fusions to lacZ: the pJEM series. J. Bacteriol. 176:6749-6753.
-
(1994)
J. Bacteriol
, vol.176
, pp. 6749-6753
-
-
Timm, J.1
Lim, E.M.2
Gicquel, B.3
-
35
-
-
0032489441
-
Purification and characterization of Bacillus subtilis PyrR, a bifunctional pyr mRNA-binding attenuation protein/uracil phosphoribosyltransferase
-
Turner, R. J., E. R. Bonner, G. K. Grabner, and R. L. Switzer. 1998. Purification and characterization of Bacillus subtilis PyrR, a bifunctional pyr mRNA-binding attenuation protein/uracil phosphoribosyltransferase. J. Biol. Chem. 273:5932-5938.
-
(1998)
J. Biol. Chem
, vol.273
, pp. 5932-5938
-
-
Turner, R.J.1
Bonner, E.R.2
Grabner, G.K.3
Switzer, R.L.4
-
36
-
-
0028243808
-
Regulation of the Bacillus subtilis pyrimidine biosynthetic (pyr) gene cluster by an autogenous transcriptional attenuation mechanism
-
Turner, R. J., Y. Lu, and R. L. Switzer. 1994. Regulation of the Bacillus subtilis pyrimidine biosynthetic (pyr) gene cluster by an autogenous transcriptional attenuation mechanism. J. Bacteriol. 176:3708-3722.
-
(1994)
J. Bacteriol
, vol.176
, pp. 3708-3722
-
-
Turner, R.J.1
Lu, Y.2
Switzer, R.L.3
-
37
-
-
0030922432
-
Structure and expression of a pyrimidine gene cluster from the extreme thermophile Thermus strain ZO5
-
Van de Casteele, M., P. Chen, M. Roovers, C. Legrain, and N. Giansdorff. 1997. Structure and expression of a pyrimidine gene cluster from the extreme thermophile Thermus strain ZO5. J. Bacteriol. 179:3470-3481.
-
(1997)
J. Bacteriol
, vol.179
, pp. 3470-3481
-
-
Van de Casteele, M.1
Chen, P.2
Roovers, M.3
Legrain, C.4
Giansdorff, N.5
-
38
-
-
33747074853
-
The trp RNA-binding attenuation protein (TRAP) of Bacillus subtilis regulates translation initiation of ycbK, a gene encoding a putative efflux protein, by blocking ribosome binding
-
Yakhnin, H., A. V. Yakhnin, and P. Babitzke. 2006. The trp RNA-binding attenuation protein (TRAP) of Bacillus subtilis regulates translation initiation of ycbK, a gene encoding a putative efflux protein, by blocking ribosome binding. Mol. Microbiol. 61:1252-1266.
-
(2006)
Mol. Microbiol
, vol.61
, pp. 1252-1266
-
-
Yakhnin, H.1
Yakhnin, A.V.2
Babitzke, P.3
-
39
-
-
0347915671
-
The trp RNA-binding attenuation protein of Bacillus subtilis regulates translation of the tryptophan transport gene trpP (yhaG) by blocking ribosome binding
-
Yakhnin, H., H. Zhang, A. V. Yakhnin, and P. Babitzke. 2004. The trp RNA-binding attenuation protein of Bacillus subtilis regulates translation of the tryptophan transport gene trpP (yhaG) by blocking ribosome binding. J. Bacteriol. 186:278-286.
-
(2004)
J. Bacteriol
, vol.186
, pp. 278-286
-
-
Yakhnin, H.1
Zhang, H.2
Yakhnin, A.V.3
Babitzke, P.4
|