Dominance of Mycoplasma in the guts of the Long-Jawed Mudsucker, Gillichthys mirabilis, from five California salt marshes

Environmental Microbiology

Volumn 9, Issue 10, 2007, Pages 2636-2641

  Bano, Nasreen ^a   DeRae Smith, Angelique ^a   Bennett, William ^b   Vasquez, Lydia ^a   Hollibaugh, James T ^a  

^a UNIVERSITY OF GEORGIA   (United States)

^b UNIVERSITY OF CALIFORNIA DAVIS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

ANIMAL; ARTICLE; ECOSYSTEM; GASTROINTESTINAL TRACT; GENETICS; GROWTH, DEVELOPMENT AND AGING; ISOLATION AND PURIFICATION; METHODOLOGY; MICROBIOLOGY; MYCOPLASMA; NUCLEOTIDE SEQUENCE; PERCIFORMES; PHYLOGENY; POLYMERASE CHAIN REACTION; SALINITY; UNITED STATES; WETLAND;

ANIMALS; BASE SEQUENCE; CALIFORNIA; ECOSYSTEM; GASTROINTESTINAL TRACT; MYCOPLASMA; PERCIFORMES; PHYLOGENY; POLYMERASE CHAIN REACTION; RNA, RIBOSOMAL, 16S; SALINITY; WETLANDS;

GILLICHTHYS MIRABILIS; MIRABILIS; MYCOPLASMA; MYCOPLASMA MOBILE; MYCOPLASMATALES; SALMO SALAR;

EID: 34548446733     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/j.1462-2920.2007.01381.x     Document Type: Article

References (30)

1. Apajalahti, J.H.A., Kettunen, A., Bedford, M.R. Holben, W.E. (2001) Percent G+C profiling accurately reveals diet-related differences in the gastrointestinal microbial community of broiler chickens. Appl Environ Microbiol 67 : 5656 5667.
2. Bano, N. Hollibaugh, J.T. (2002) Phylogenetic composition of bacterioplankton assemblages from the Arctic Ocean. Appl Environ Microbiol 68 : 505 518.
3. Bano, N., Ruffin, S., Ransom, B. Hollibaugh, J.T. (2004) Phylogenetic composition of Arctic Ocean archaeal assemblages and comparison with Antarctic assemblages. Appl Environ Microbiol 70 : 781 789.
4. Bates, J.M., Mittge, E., Kuhlman, J., Baden, K.N., Cheesman, S.E. Guillemin, K. (2006) Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation. Dev Biology 297 : 374.
5. Brown, D.R., Zacher, L.A., Wendland, L.D. Brown, M.R. (2005) Emerging mycoplasmoses in wildlife. In Mycoplasmas: Molecular Biology, Pathogenicity and Strategies for Control. Blanchard, A. Browning, G. (eds). Norwich, UK : Horizon Bioscience, pp. 383 414.
6. Dandekar, T., Snel, B., Schmidt, S., Lathe, W., Suyama, M., Huynen, M. Bork, P. (2002) Comparative genome analysis of Mollicutes. In Molecular Biology and Pathogenicity of Mycoplasmas. New York, USA : Kluwer Academic/Plenum, pp. 255 278.
7. Defosse, D.L., Johnson, R.C., Paster, B.J., Dewhirst, F.E. Fraser, G.J. (1995) Brevinema andersonii gen. nov., sp. nov., an infectious spirochete isolated from the short-tailed shrew (Blarina brevicauda) and the white-footed mouse (Peromyscus leucopus). Int J Syst Evol Microbiol 45 : 78 84.
8. Delong, E.F. (1992) Archaea in coastal marine environments. Proc Natl Acad Sci USA 89 : 5685 5689.
9. Eckburg, P.B., Bik, E.M., Bernstein, C.N., Purdom, E., Dethlefsen, L., Sargent, M., et al. (2005) Diversity of the human intestinal microbial flora. Science 308 : 1635 1638.
10. Foster, G., Ross, H.M., Naylor, R.D., Collins, M.D., Ramos, C.P., Fernandez Garayzabal, F. Reid, R.J. (1995) Cetobacterium ceti gen nov., sp. nov., a new Gram-negative obligate anaerobe from sea mammals. Lett Appl Microbiol 21 : 202 206.
11. Fraser, C.M., Gocayne, J.D., White, O., Adams, M.D., Clayton, R.A., Fleischmann, R.D., et al. (1995) The minimal gene complement of Mycoplasma genitalium. Science 270 : 397 404.
12. Giebel, J., Binder, A. Kirchhoff, H. (1990) Isolation of Mycoplasma moatsii from the intestine of wild Norway rats (Rattus norvegicus). Vet Microbiol 22 : 23 29.
13. Holben, W.E., Williams, P., Saarinen, M., Sarkilahti, L.K. Apajalahti, J.H.A. (2002) Phylogenetic analysis of intestinal microflora indicates a novel mycoplasma phylotype in farmed and wild salmon. Microb Ecol 44 : 175 185.
14. Horsley, R.W. (1977) A review of the bacterial flora of teleosts and elasmobranchs, including methods for its analysis. J Fish Biol 10 : 529 553.
15. Huber, I., Spanggaard, B., Appel, K.F., Rossen, L., Nielsen, T. Gram, L. (2004) Phylogenetic analysis and in situ identification of the intestinal microbial community of rainbow trout (Oncorhynchus mykiss, Walbaum). J Appl Microbiol 96 : 117 132.
16. Jaffe, J.D., Stange-Thomann, N., Smith, C., DeCaprio, D., Fisher, S., Butler, J., et al. (2004) The complete genome and proteome of Mycoplasma mobile. Genome Res 14 : 1447 1461.
17. Kimura, B., Hokimoto, S., Takahashi, H., Fujii, T. (2000) Photobacterium histaminum Okuzumi et al., 1994 is a later subjective synonym of Photobacterium damselae subsp. damselae (Love et al., 1981) Smith et al., 1991. Int J Syst Evol Microbiol 50 : 1339 1342.
18. Kirchhoff, H., Beyene, P., Fischer, M., Flossdorf, J., Heitmann, J., Khattab, B., et al. (1987) Mycoplasma mobile sp. nov., a new species from fish. Int J Syst Bacteriol 37 : 192 197.
19. Moran, D., Turner, S.J. Clements, K.D. (2005) Ontogenetic development of the gastrointestinal microbiota in the marine herbivorous fish Kyphosus sydneyanus. Microb Ecol 49 : 590 597.
20. Rawls, J.F., Samuel, B.S. Gordon, J.I. (2004) From the cover: gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota. Proc Natl Acad F Sci USA 101 : 4596 4601.
21. Rawls, J.F., Mahowald, M.A., Ley, R.E. Gordon, J.I. (2006) Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection. Cell 127 : 423.
22. Razin, S., Yogev, D. Naot, Y. (1998) Molecular biology and pathogenicity of mycoplasmas. Microbiol Mol Biol Rev 62 : 1094 1156.
23. Reid, C.A. Hillman, K. (1999) The effects of retrogradation and amylose/amylopectin ratio of starches on carbohydrate fermentation and microbial populations in the porcine colon. Anim Sci 68 : 503 510.
24. Ringø, E. Birkbeck, T.H. (1999) Intestinal microflora of fish larvae and fry. Aquac Res 30 : 73 93.
25. Ringo, E., Bendiksen, H.R., Wesmajervi, M.S., Olsen, R.E., Jansen, P.A. Mikkelsen, H. (2000) Lactic acid bacteria associated with the digestive tract of Atlantic salmon (Salmo salar L.). J Appl Microbiol 89 : 317 322.
26. Roediger, W.E.W. Macfarlane, G.T. (2002) A role for intestinal mycoplasmas in the aetiology of Crohn's disease? J Appl Microbiol 92 : 377 381.
27. Romero, J. Paola, N. (2006) 16S rDNA-based analysis of dominant bacterial populations associated with early life stages of Coho salmon (Oncorhynchus kisutch). Microb Ecol 51 : 422 430.
28. Spanggaard, B., Huber, I., Nielsen, J., Nielsen, T., Appel, K.F. Gram, L. (2000) The microflora of rainbow trout intestine: a comparison of traditional and molecular identification. Aquaculture 182 : 1 15.
29. Trust, T.J. (1975) Facultative anaerobic bacteria in the digestive tract of Chum Salmon (Oncorhynchus keta) maintained in fresh water under defined culture conditions. Appl Microbiol 29 : 663 668.
30. Trust, T.J. Sparrow, R.A. (1974) The bacterial flora in the alimentary tract of freshwater salmonid fishes. Can J Microbiol 20 : 1219 1228.