-
1
-
-
0037495037
-
Architecture of initiation-competent 12-subunit RNA polymerase II
-
Armache, K.J., Kettenberger, H. Cramer, P. (2003) Architecture of initiation-competent 12-subunit RNA polymerase II. Proc Natl Acad Sci USA 100 : 6964 6968.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 6964-6968
-
-
Armache, K.J.1
Kettenberger, H.2
Cramer, P.3
-
2
-
-
2942555020
-
A high-affinity interaction between NusA and the rrn nut site in Mycobacterium tuberculosis
-
Arnvig, K.B., Pennell, S., Gopal, B. Colston, M.J. (2004) A high-affinity interaction between NusA and the rrn nut site in Mycobacterium tuberculosis. Proc Natl Acad Sci USA 101 : 8325 8330.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 8325-8330
-
-
Arnvig, K.B.1
Pennell, S.2
Gopal, B.3
Colston, M.J.4
-
3
-
-
0034077514
-
Is gene expression in Halobacterium NRC-1 regulated by multiple TBP and TFB transcription factors?
-
Baliga, N.S., Goo, Y.A., Ng, W.V., Hood, L., Daniels, C.J. DasSarma, S. (2000) Is gene expression in Halobacterium NRC-1 regulated by multiple TBP and TFB transcription factors? Mol Microbiol 36 : 1184 1185.
-
(2000)
Mol Microbiol
, vol.36
, pp. 1184-1185
-
-
Baliga, N.S.1
Goo, Y.A.2
Ng, W.V.3
Hood, L.4
Daniels, C.J.5
Dassarma, S.6
-
4
-
-
12944324227
-
A ratchet mechanism of transcription elongation and its control
-
Bar-Nahum, G., Epshtein, V., Ruckenstein, A.E., Rafikov, R., Mustaev, A. Nudler, E. (2005) A ratchet mechanism of transcription elongation and its control. Cell 120 : 183 193.
-
(2005)
Cell
, vol.120
, pp. 183-193
-
-
Bar-Nahum, G.1
Epshtein, V.2
Ruckenstein, A.E.3
Rafikov, R.4
Mustaev, A.5
Nudler, E.6
-
5
-
-
0033823109
-
The orientation of DNA in an archaeal transcription initiation complex
-
Bartlett, M.S., Thomm, M. Geiduschek, E.P. (2000) The orientation of DNA in an archaeal transcription initiation complex. Nat Struct Biol 7 : 782 785.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 782-785
-
-
Bartlett, M.S.1
Thomm, M.2
Geiduschek, E.P.3
-
6
-
-
1242339612
-
Topography of the euryarchaeal transcription initiation complex
-
Bartlett, M.S., Thomm, M. Geiduschek, E.P. (2004) Topography of the euryarchaeal transcription initiation complex. J Biol Chem 279 : 5894 5903.
-
(2004)
J Biol Chem
, vol.279
, pp. 5894-5903
-
-
Bartlett, M.S.1
Thomm, M.2
Geiduschek, E.P.3
-
7
-
-
0033817979
-
Charting a course through RNA polymerase
-
Bell, S.D. Jackson, S.P. (2000a) Charting a course through RNA polymerase. Nat Struct Biol 7 : 703 705.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 703-705
-
-
Bell, S.D.1
Jackson, S.P.2
-
8
-
-
0034724913
-
The role of transcription factor B in transcription initiation and promoter clearance in the archaeon Sulfolobus acidocaldarius
-
Bell, S.D. Jackson, S.P. (2000b) The role of transcription factor B in transcription initiation and promoter clearance in the archaeon Sulfolobus acidocaldarius. J Biol Chem 275 : 12934 12940.
-
(2000)
J Biol Chem
, vol.275
, pp. 12934-12940
-
-
Bell, S.D.1
Jackson, S.P.2
-
9
-
-
0035067057
-
Mechanism and regulation of transcription in archaea
-
Bell, S.D. Jackson, S.P. (2001) Mechanism and regulation of transcription in archaea. Curr Opin Microbiol 4 : 208 213.
-
(2001)
Curr Opin Microbiol
, vol.4
, pp. 208-213
-
-
Bell, S.D.1
Jackson, S.P.2
-
10
-
-
0034745386
-
The archaeal TFIIEalpha homologue facilitates transcription initiation by enhancing TATA-box recognition
-
Bell, S.D., Brinkman, A.B., van der Oost, J. Jackson, S.P. (2001) The archaeal TFIIEalpha homologue facilitates transcription initiation by enhancing TATA-box recognition. EMBO Rep 2 : 133 138.
-
(2001)
EMBO Rep
, vol.2
, pp. 133-138
-
-
Bell, S.D.1
Brinkman, A.B.2
Van Der Oost, J.3
Jackson, S.P.4
-
11
-
-
34147155174
-
Structural basis for converting a general transcription factor into an operon-specific virulence regulator
-
Belogurov, G.A., Vassylyeva, M.N., Svetlov, V., Klyuyev, S., Grishin, N.V., Vassylyev, D.G. Artsimovitch, I. (2007) Structural basis for converting a general transcription factor into an operon-specific virulence regulator. Mol Cell 26 : 117 129.
-
(2007)
Mol Cell
, vol.26
, pp. 117-129
-
-
Belogurov, G.A.1
Vassylyeva, M.N.2
Svetlov, V.3
Klyuyev, S.4
Grishin, N.V.5
Vassylyev, D.G.6
Artsimovitch, I.7
-
12
-
-
27144547978
-
Structure of a Mycobacterium tuberculosis NusA-RNA complex
-
Beuth, B., Pennell, S., Arnvig, K.B., Martin, S.R. Taylor, I.A. (2005) Structure of a Mycobacterium tuberculosis NusA-RNA complex. EMBO J 24 : 3576 3587.
-
(2005)
EMBO J
, vol.24
, pp. 3576-3587
-
-
Beuth, B.1
Pennell, S.2
Arnvig, K.B.3
Martin, S.R.4
Taylor, I.A.5
-
13
-
-
14844329013
-
Bacterial transcription elongation factors: New insights into molecular mechanism of action
-
Borukhov, S., Lee, J. Laptenko, O. (2005) Bacterial transcription elongation factors: new insights into molecular mechanism of action. Mol Microbiol 55 : 1315 1324.
-
(2005)
Mol Microbiol
, vol.55
, pp. 1315-1324
-
-
Borukhov, S.1
Lee, J.2
Laptenko, O.3
-
14
-
-
0034908770
-
Partners of Rpb8p, a small subunit shared by yeast RNA polymerases I, II and III
-
Briand, J.F., Navarro, F., Rematier, P., Boschiero, C., Labarre, S., Werner, M., et al. (2001) Partners of Rpb8p, a small subunit shared by yeast RNA polymerases I, II and III. Mol Cell Biol 21 : 6056 6065.
-
(2001)
Mol Cell Biol
, vol.21
, pp. 6056-6065
-
-
Briand, J.F.1
Navarro, F.2
Rematier, P.3
Boschiero, C.4
Labarre, S.5
Werner, M.6
-
15
-
-
1142274214
-
Structural basis of transcription: An RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms
-
Bushnell, D.A., Westover, K.D., Davis, R.E. Kornberg, R.D. (2004) Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms. Science 303 : 983 988.
-
(2004)
Science
, vol.303
, pp. 983-988
-
-
Bushnell, D.A.1
Westover, K.D.2
Davis, R.E.3
Kornberg, R.D.4
-
16
-
-
0141992120
-
Binding of TFIIB to RNA polymerase II: Mapping the binding site for the TFIIB zinc ribbon domain within the preinitiation complex
-
Chen, H.T. Hahn, S. (2003) Binding of TFIIB to RNA polymerase II: mapping the binding site for the TFIIB zinc ribbon domain within the preinitiation complex. Mol Cell 12 : 437 447.
-
(2003)
Mol Cell
, vol.12
, pp. 437-447
-
-
Chen, H.T.1
Hahn, S.2
-
17
-
-
5444275331
-
Mapping the location of TFIIB within the RNA polymerase II transcription preinitiation complex: A model for the structure of the PIC
-
Chen, H.T. Hahn, S. (2004) Mapping the location of TFIIB within the RNA polymerase II transcription preinitiation complex: a model for the structure of the PIC. Cell 119 : 169 180.
-
(2004)
Cell
, vol.119
, pp. 169-180
-
-
Chen, H.T.1
Hahn, S.2
-
18
-
-
8544251268
-
Rpb4 and Rpb7: Subunits of RNA polymerase II and beyond
-
Choder, M. (2004) Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem Sci 29 : 674 681.
-
(2004)
Trends Biochem Sci
, vol.29
, pp. 674-681
-
-
Choder, M.1
-
19
-
-
0242266617
-
RNA polymerase II/TFIIF structure and conserved organization of the initiation complex
-
Chung, W.H., Craighead, J.L., Chang, W.H., Ezeokonkwo, C., Bareket-Samish, A., Kornberg, R.D. Asturias, F.J. (2003) RNA polymerase II/TFIIF structure and conserved organization of the initiation complex. Mol Cell 12 : 1003 1013.
-
(2003)
Mol Cell
, vol.12
, pp. 1003-1013
-
-
Chung, W.H.1
Craighead, J.L.2
Chang, W.H.3
Ezeokonkwo, C.4
Bareket-Samish, A.5
Kornberg, R.D.6
Asturias, F.J.7
-
20
-
-
0028804889
-
Control of rRNA transcription in Escherichia coli
-
Condon, C., Squires, C. Squires, C.L. (1995) Control of rRNA transcription in Escherichia coli. Microbiol Rev 59 : 623 645.
-
(1995)
Microbiol Rev
, vol.59
, pp. 623-645
-
-
Condon, C.1
Squires, C.2
Squires, C.L.3
-
21
-
-
0036468364
-
Multisubunit RNA polymerases
-
Cramer, P. (2002a) Multisubunit RNA polymerases. Curr Opin Struct Biol 12 : 89 97.
-
(2002)
Curr Opin Struct Biol
, vol.12
, pp. 89-97
-
-
Cramer, P.1
-
22
-
-
0035984649
-
Common structural features of nucleic acid polymerases
-
Cramer, P. (2002b) Common structural features of nucleic acid polymerases. Bioessays 24 : 724 729.
-
(2002)
Bioessays
, vol.24
, pp. 724-729
-
-
Cramer, P.1
-
23
-
-
1942535198
-
RNA polymerase II structure: From core to functional complexes
-
Cramer, P. (2004) RNA polymerase II structure: from core to functional complexes. Curr Opin Genet Dev 14 : 218 226.
-
(2004)
Curr Opin Genet Dev
, vol.14
, pp. 218-226
-
-
Cramer, P.1
-
24
-
-
0032779428
-
Methanobacterium thermoautotrophicum RNA polymerase and transcription in vitro
-
Darcy, T.J., Hausner, W., Awery, D.E., Edwards, A.M., Thomm, M. Reeve, J.N. (1999) Methanobacterium thermoautotrophicum RNA polymerase and transcription in vitro. J Bacteriol 181 : 4424 4429.
-
(1999)
J Bacteriol
, vol.181
, pp. 4424-4429
-
-
Darcy, T.J.1
Hausner, W.2
Awery, D.E.3
Edwards, A.M.4
Thomm, M.5
Reeve, J.N.6
-
26
-
-
34248399625
-
General transcription factor specified global gene regulation in archaea
-
Facciotti, M.T., Reiss, D.J., Pan, M., Kaur, A., Vuthoori, M., Bonneau, R., et al. (2007) General transcription factor specified global gene regulation in archaea. Proc Natl Acad Sci USA 104 : 4630 4635.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 4630-4635
-
-
Facciotti, M.T.1
Reiss, D.J.2
Pan, M.3
Kaur, A.4
Vuthoori, M.5
Bonneau, R.6
-
27
-
-
1642540256
-
Photo-cross-linking of a purified preinitiation complex reveals central roles for the RNA polymerase II mobile clamp and TFIIE in initiation mechanisms
-
Forget, D., Langelier, M.F., Therien, C., Trinh, V. Coulombe, B. (2004) Photo-cross-linking of a purified preinitiation complex reveals central roles for the RNA polymerase II mobile clamp and TFIIE in initiation mechanisms. Mol Cell Biol 24 : 1122 1131.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 1122-1131
-
-
Forget, D.1
Langelier, M.F.2
Therien, C.3
Trinh, V.4
Coulombe, B.5
-
28
-
-
34047240365
-
Transcription and translation are coupled in archaea
-
French, S.L., Santangelo, T.J., Beyer, A.L. Reeve, J.N. (2007) Transcription and translation are coupled in archaea. Mol Biol Evol 24 : 893 895.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 893-895
-
-
French, S.L.1
Santangelo, T.J.2
Beyer, A.L.3
Reeve, J.N.4
-
30
-
-
33750043192
-
Protein-protein interactions in the archaeal transcriptional machinery: Binding studies of isolated RNA polymerase subunits and transcription factors
-
Goede, B., Naji, S., von Kampen, O., Ilg, K. Thomm, M. (2006) Protein-protein interactions in the archaeal transcriptional machinery: binding studies of isolated RNA polymerase subunits and transcription factors. J Biol Chem 281 : 30581 30592.
-
(2006)
J Biol Chem
, vol.281
, pp. 30581-30592
-
-
Goede, B.1
Naji, S.2
Von Kampen, O.3
Ilg, K.4
Thomm, M.5
-
31
-
-
3142596395
-
A proteomic determination of cold adaptation in the Antarctic archaeon, Methanococcoides burtonii
-
Goodchild, A., Saunders, N.F.W., Ertan, H., Raftery, M., Guilhaus, M., Curmi, P.M.G. Cavicchioli, R. (2004) A proteomic determination of cold adaptation in the Antarctic archaeon, Methanococcoides burtonii. Mol Microbiol 53 : 309 321.
-
(2004)
Mol Microbiol
, vol.53
, pp. 309-321
-
-
Goodchild, A.1
Saunders, N.F.W.2
Ertan, H.3
Raftery, M.4
Guilhaus, M.5
Curmi, P.M.G.6
Cavicchioli, R.7
-
32
-
-
0035116309
-
TFE, an archaeal transcription factor in Methanobacterium thermoautotrophicum related to eucaryal transcription factor TFIIEalpha
-
Hanzelka, B.L., Darcy, T.J. Reeve, J.N. (2001) TFE, an archaeal transcription factor in Methanobacterium thermoautotrophicum related to eucaryal transcription factor TFIIEalpha. J Bacteriol 183 : 1813 1818.
-
(2001)
J Bacteriol
, vol.183
, pp. 1813-1818
-
-
Hanzelka, B.L.1
Darcy, T.J.2
Reeve, J.N.3
-
33
-
-
0034724854
-
Transcription factor S, a cleavage induction factor of the archaeal RNA polymerase
-
Hausner, W., Lange, U. Musfeldt, M. (2000) Transcription factor S, a cleavage induction factor of the archaeal RNA polymerase. J Biol Chem 275 : 12393 12399.
-
(2000)
J Biol Chem
, vol.275
, pp. 12393-12399
-
-
Hausner, W.1
Lange, U.2
Musfeldt, M.3
-
34
-
-
0037791613
-
Evolutionary connection between the catalytic subunits of DNA-dependent RNA polymerases and eukaryotic RNA-dependent RNA polymerases and the origin of RNA polymerases
-
Iyer, L.M., Koonin, E.V. Aravind, L. (2003) Evolutionary connection between the catalytic subunits of DNA-dependent RNA polymerases and eukaryotic RNA-dependent RNA polymerases and the origin of RNA polymerases. BMC Struct Biol 3 : 1.
-
(2003)
BMC Struct Biol
, vol.3
, pp. 1
-
-
Iyer, L.M.1
Koonin, E.V.2
Aravind, L.3
-
35
-
-
33745499068
-
Structural biology of RNA polymerase III: Subcomplex C17/25, X-ray structure and 11 subunit enzyme model
-
Jasiak, A.J., Armache, K.J., Martens, B., Jansen, R.P. Cramer, P. (2006) Structural biology of RNA polymerase III: subcomplex C17/25, X-ray structure and 11 subunit enzyme model. Mol Cell 23 : 71 81.
-
(2006)
Mol Cell
, vol.23
, pp. 71-81
-
-
Jasiak, A.J.1
Armache, K.J.2
Martens, B.3
Jansen, R.P.4
Cramer, P.5
-
36
-
-
33745839780
-
Structural, biochemical, and dynamic characterizations of the hRPB8 subunit of human RNA polymerases
-
Kang, X., Hu, Y., Li, Y., Guo, X., Jiang, X., Lai, L., et al. (2006) Structural, biochemical, and dynamic characterizations of the hRPB8 subunit of human RNA polymerases. J Biol Chem 281 : 18216 18226.
-
(2006)
J Biol Chem
, vol.281
, pp. 18216-18226
-
-
Kang, X.1
Hu, Y.2
Li, Y.3
Guo, X.4
Jiang, X.5
Lai, L.6
-
37
-
-
0043244876
-
Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage
-
Kettenberger, H., Armache, K.J. Cramer, P. (2003) Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage. Cell 114 : 347 357.
-
(2003)
Cell
, vol.114
, pp. 347-357
-
-
Kettenberger, H.1
Armache, K.J.2
Cramer, P.3
-
38
-
-
0031886545
-
Eukaryotic RNA polymerase subunit RPB8 is a new relative of the OB family
-
Krapp, S., Kelly, G., Reischl, J., Weinzierl, R.O. Matthews, S. (1998) Eukaryotic RNA polymerase subunit RPB8 is a new relative of the OB family. Nat Struct Biol 5 : 110 114.
-
(1998)
Nat Struct Biol
, vol.5
, pp. 110-114
-
-
Krapp, S.1
Kelly, G.2
Reischl, J.3
Weinzierl, R.O.4
Matthews, S.5
-
39
-
-
3142733093
-
Transcriptional fidelity and proofreading in Archaea and implications for the mechanism of TFS-induced RNA cleavage
-
Lange, U. Hausner, W. (2004) Transcriptional fidelity and proofreading in Archaea and implications for the mechanism of TFS-induced RNA cleavage. Mol Microbiol 52 : 1133 1143.
-
(2004)
Mol Microbiol
, vol.52
, pp. 1133-1143
-
-
Lange, U.1
Hausner, W.2
-
40
-
-
0028362547
-
A subunit of an archaeal DNA-dependent RNA polymerase contains the S1 motif
-
Langer, D., Lottspeich, F. Zillig, W. (1994) A subunit of an archaeal DNA-dependent RNA polymerase contains the S1 motif. Nucleic Acids Res 22 : 694.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 694
-
-
Langer, D.1
Lottspeich, F.2
Zillig, W.3
-
41
-
-
0032747748
-
Functional importance of regions in Escherichia coli elongation factor NusA that interact with RNA polymerase, the bacteriophage lambda N protein and RNA
-
Mah, T.F., Li, J., Davidson, A.R. Greenblatt, J. (1999) Functional importance of regions in Escherichia coli elongation factor NusA that interact with RNA polymerase, the bacteriophage lambda N protein and RNA. Mol Microbiol 34 : 523 537.
-
(1999)
Mol Microbiol
, vol.34
, pp. 523-537
-
-
Mah, T.F.1
Li, J.2
Davidson, A.R.3
Greenblatt, J.4
-
42
-
-
0348111451
-
An extended winged helix domain in general transcription factor E/IIE alpha
-
Meinhart, A., Blobel, J. Cramer, P. (2003) An extended winged helix domain in general transcription factor E/IIE alpha. J Biol Chem 278 : 48267 48274.
-
(2003)
J Biol Chem
, vol.278
, pp. 48267-48274
-
-
Meinhart, A.1
Blobel, J.2
Cramer, P.3
-
43
-
-
0043163795
-
Structural and functional homology between the RNAP(I) subunits A14/A43 and the archaeal RNAP subunits E/F
-
Meka, H., Daoust, G., Arnvig, K.B., Werner, F., Brick, P. Onesti, S. (2003) Structural and functional homology between the RNAP(I) subunits A14/A43 and the archaeal RNAP subunits E/F. Nucleic Acids Res 31 : 4391 4400.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 4391-4400
-
-
Meka, H.1
Daoust, G.2
Arnvig, K.B.3
Werner, F.4
Brick, P.5
Onesti, S.6
-
44
-
-
28544436370
-
Crystal structure and RNA binding of the Rpb4/Rpb7 subunits of human RNA polymerase II
-
Meka, H., Werner, F., Cordell, S.C., Onesti, S. Brick, P. (2005) Crystal structure and RNA binding of the Rpb4/Rpb7 subunits of human RNA polymerase II. Nucleic Acids Res 33 : 6435 6444.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 6435-6444
-
-
Meka, H.1
Werner, F.2
Cordell, S.C.3
Onesti, S.4
Brick, P.5
-
45
-
-
34249652975
-
The Rpb7 orthologue E′ is required for transcriptional activity of a reconstituted archaeal core enzyme at low temperatures and stimulates open complex formation
-
Naji, S., Gruenberg, S. Thomm, M. (2007) The Rpb7 orthologue E′ is required for transcriptional activity of a reconstituted archaeal core enzyme at low temperatures and stimulates open complex formation. J Biol Chem 282 : 11047 11057.
-
(2007)
J Biol Chem
, vol.282
, pp. 11047-11057
-
-
Naji, S.1
Gruenberg, S.2
Thomm, M.3
-
46
-
-
0036668461
-
Transcription termination and anti-termination in E. coli
-
Nudler, E. Gottesman, M.E. (2002) Transcription termination and anti-termination in E. coli. Genes Cells 7 : 755 768.
-
(2002)
Genes Cells
, vol.7
, pp. 755-768
-
-
Nudler, E.1
Gottesman, M.E.2
-
47
-
-
14844302397
-
Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation
-
Onodera, Y., Haag, J.R., Ream, T., Nunes, P.C., Pontes, O. Pikaard, C.S. (2005) Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation. Cell 120 : 613 622.
-
(2005)
Cell
, vol.120
, pp. 613-622
-
-
Onodera, Y.1
Haag, J.R.2
Ream, T.3
Nunes, P.C.4
Pontes, O.5
Pikaard, C.S.6
-
48
-
-
0035971082
-
Dissociable Rpb4-Rpb7 subassembly of RNA polymerase II binds to single-strand nucleic acid and mediates a post-recruitment step in transcription initiation
-
Orlicky, S.M., Tran, P.T., Sayre, M.H. Edwards, A.M. (2001) Dissociable Rpb4-Rpb7 subassembly of RNA polymerase II binds to single-strand nucleic acid and mediates a post-recruitment step in transcription initiation. J Biol Chem 276 : 10097 10102.
-
(2001)
J Biol Chem
, vol.276
, pp. 10097-10102
-
-
Orlicky, S.M.1
Tran, P.T.2
Sayre, M.H.3
Edwards, A.M.4
-
49
-
-
10644284660
-
A fully recombinant system for activator-dependent archaeal transcription
-
Ouhammouch, M., Werner, F., Weinzierl, R.O. Geiduschek, E.P. (2004) A fully recombinant system for activator-dependent archaeal transcription. J Biol Chem 279 : 51719 51721.
-
(2004)
J Biol Chem
, vol.279
, pp. 51719-51721
-
-
Ouhammouch, M.1
Werner, F.2
Weinzierl, R.O.3
Geiduschek, E.P.4
-
50
-
-
0036713442
-
Novel domains and orthologues of eukaryotic transcription elongation factors
-
Ponting, C.P. (2002) Novel domains and orthologues of eukaryotic transcription elongation factors. Nucleic Acids Res 30 : 3643 3652.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 3643-3652
-
-
Ponting, C.P.1
-
51
-
-
1642453651
-
Transcription factor B contacts promoter DNA near the transcription start site of the archaeal transcription initiation complex
-
Renfrow, M.B., Naryshkin, N., Lewis, L.M., Chen, H.T., Ebright, R.H. Scott, R.A. (2004) Transcription factor B contacts promoter DNA near the transcription start site of the archaeal transcription initiation complex. J Biol Chem 279 : 2825 2831.
-
(2004)
J Biol Chem
, vol.279
, pp. 2825-2831
-
-
Renfrow, M.B.1
Naryshkin, N.2
Lewis, L.M.3
Chen, H.T.4
Ebright, R.H.5
Scott, R.A.6
-
52
-
-
28844477575
-
Archaeal RNA polymerase is sensitive to intrinsic termination directed by transcribed and remote sequences
-
Santangelo, T.J. Reeve, J.N. (2006) Archaeal RNA polymerase is sensitive to intrinsic termination directed by transcribed and remote sequences. J Mol Biol 355 : 196 210.
-
(2006)
J Mol Biol
, vol.355
, pp. 196-210
-
-
Santangelo, T.J.1
Reeve, J.N.2
-
53
-
-
33847118046
-
TFB1 or TFB2 is sufficient for Thermococcus kodakaraensis viability and for basal transcription in vitro
-
Santangelo, T.J., Cubonova, L., James, C.L. Reeve, J.N. (2007) TFB1 or TFB2 is sufficient for Thermococcus kodakaraensis viability and for basal transcription in vitro. J Mol Biol 367 : 344 357.
-
(2007)
J Mol Biol
, vol.367
, pp. 344-357
-
-
Santangelo, T.J.1
Cubonova, L.2
James, C.L.3
Reeve, J.N.4
-
54
-
-
33847072649
-
Crystal structure and RNA-binding analysis of the archaeal transcription factor NusA
-
Shibata, R., Bessho, Y., Shinkai, A., Nishimoto, M., Fusatomi, E., Terada, T., et al. (2007) Crystal structure and RNA-binding analysis of the archaeal transcription factor NusA. Biochem Biophys Res Commun 355 : 122 128.
-
(2007)
Biochem Biophys Res Commun
, vol.355
, pp. 122-128
-
-
Shibata, R.1
Bessho, Y.2
Shinkai, A.3
Nishimoto, M.4
Fusatomi, E.5
Terada, T.6
-
56
-
-
33645083475
-
Translation initiation with GUC codon in the archaeon Halobacterium salinarum: Implications for translation of leaderless mRNA and strict correlation between translation initiation and presence of mRNA
-
Srinivasan, G., Krebs, M.P. RajBhandary, U.L. (2006) Translation initiation with GUC codon in the archaeon Halobacterium salinarum: implications for translation of leaderless mRNA and strict correlation between translation initiation and presence of mRNA. Mol Microbiol 59 : 1013 1024.
-
(2006)
Mol Microbiol
, vol.59
, pp. 1013-1024
-
-
Srinivasan, G.1
Krebs, M.P.2
Rajbhandary, U.L.3
-
57
-
-
0027184481
-
A general two-metal-ion mechanism for catalytic RNA
-
Steitz, T.A. Steitz, J.A. (1993) A general two-metal-ion mechanism for catalytic RNA. Proc Natl Acad Sci USA 90 : 6498 6502.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 6498-6502
-
-
Steitz, T.A.1
Steitz, J.A.2
-
58
-
-
0035930324
-
Structure of an archaeal homolog of the eukaryotic RNA polymerase II RPB4/RPB7 complex
-
Todone, F., Brick, P., Werner, F., Weinzierl, R.O. Onesti, S. (2001) Structure of an archaeal homolog of the eukaryotic RNA polymerase II RPB4/RPB7 complex. Mol Cell 8 : 1137 1143.
-
(2001)
Mol Cell
, vol.8
, pp. 1137-1143
-
-
Todone, F.1
Brick, P.2
Werner, F.3
Weinzierl, R.O.4
Onesti, S.5
-
59
-
-
33645119890
-
Structural perspective on mutations affecting the function of multisubunit RNA polymerases
-
Trinh, V., Langelier, M.F., Archambault, J. Coulombe, B. (2006) Structural perspective on mutations affecting the function of multisubunit RNA polymerases. Microbiol Mol Biol Rev 70 : 12 36.
-
(2006)
Microbiol Mol Biol Rev
, vol.70
, pp. 12-36
-
-
Trinh, V.1
Langelier, M.F.2
Archambault, J.3
Coulombe, B.4
-
60
-
-
30044431985
-
RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit
-
Ujvari, A. Luse, D.S. (2006) RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit. Nat Struct Mol Biol 13 : 49 54.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 49-54
-
-
Ujvari, A.1
Luse, D.S.2
-
61
-
-
0037155793
-
The Rpb9 subunit of RNA polymerase II binds transcription factor TFIIE and interferes with the SAGA and elongator histone acetyltransferases
-
Van Mullem, V., Wery, M., Werner, M., Vandenhaute, J. Thuriaux, P. (2002) The Rpb9 subunit of RNA polymerase II binds transcription factor TFIIE and interferes with the SAGA and elongator histone acetyltransferases. J Biol Chem 277 : 10220 10225.
-
(2002)
J Biol Chem
, vol.277
, pp. 10220-10225
-
-
Van Mullem, V.1
Wery, M.2
Werner, M.3
Vandenhaute, J.4
Thuriaux, P.5
-
62
-
-
34447499995
-
Structural basis for transcription elongation by bacterial RNA polymerase
-
Vassylyev, D.G., Vassylyeva, M.N., Perederina, A., Tahirov, T.H. Artsimovitch, I. (2007a) Structural basis for transcription elongation by bacterial RNA polymerase. Nature 448 : 157 162.
-
(2007)
Nature
, vol.448
, pp. 157-162
-
-
Vassylyev, D.G.1
Vassylyeva, M.N.2
Perederina, A.3
Tahirov, T.H.4
Artsimovitch, I.5
-
63
-
-
34447513771
-
Structural basis for substrate loading in bacterial RNA polymerase
-
Vassylyev, D.G., Vassylyeva, M.N., Zhang, J., Palangat, M., Artsimovitch, I. Landick, R. (2007b) Structural basis for substrate loading in bacterial RNA polymerase. Nature 448 : 163 168.
-
(2007)
Nature
, vol.448
, pp. 163-168
-
-
Vassylyev, D.G.1
Vassylyeva, M.N.2
Zhang, J.3
Palangat, M.4
Artsimovitch, I.5
Landick, R.6
-
64
-
-
0028227702
-
The RNA chain elongation rate in Escherichia coli depends on the growth rate
-
Vogel, U. Jensen, K.F. (1994) The RNA chain elongation rate in Escherichia coli depends on the growth rate. J Bacteriol 176 : 2807 2813.
-
(1994)
J Bacteriol
, vol.176
, pp. 2807-2813
-
-
Vogel, U.1
Jensen, K.F.2
-
65
-
-
0036753399
-
A recombinant RNA polymerase II-like enzyme capable of promoter-specific transcription
-
Werner, F. Weinzierl, R.O. (2002) A recombinant RNA polymerase II-like enzyme capable of promoter-specific transcription. Mol Cell 10 : 635 646.
-
(2002)
Mol Cell
, vol.10
, pp. 635-646
-
-
Werner, F.1
Weinzierl, R.O.2
-
66
-
-
24344504002
-
Direct modulation of RNA polymerase core functions by basal transcription factors
-
Werner, F. Weinzierl, R.O. (2005) Direct modulation of RNA polymerase core functions by basal transcription factors. Mol Cell Biol 25 : 8344 8355.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 8344-8355
-
-
Werner, F.1
Weinzierl, R.O.2
-
67
-
-
0034326829
-
Archaeal RNA polymerase subunits F and P are bona fide homologs of eukaryotic RPB4 and RPB12
-
Werner, F., Eloranta, J.J. Weinzierl, R.O. (2000) Archaeal RNA polymerase subunits F and P are bona fide homologs of eukaryotic RPB4 and RPB12. Nucleic Acids Res 28 : 4299 4305.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 4299-4305
-
-
Werner, F.1
Eloranta, J.J.2
Weinzierl, R.O.3
-
68
-
-
0025739871
-
RNA polymerase II
-
Young, R.A. (1991) RNA polymerase II. Ann Rev Biochem 60 : 689 715.
-
(1991)
Ann Rev Biochem
, vol.60
, pp. 689-715
-
-
Young, R.A.1
|