-
1
-
-
0035964342
-
Electrostatics of nanosystems: application to microtubules and the ribosome
-
Baker N.A., Sept D., Joseph S., Holst M.J., and McCammon J.A. Electrostatics of nanosystems: application to microtubules and the ribosome. Proc. Natl. Acad. Sci. USA 98 (2001) 10037-10041
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
-
2
-
-
0028877602
-
Structural features of the reactions between antibodies and protein antigens
-
Braden B.C., and Poljak R.J. Structural features of the reactions between antibodies and protein antigens. FASEB. J. 9 (1995) 9-16
-
(1995)
FASEB. J.
, vol.9
, pp. 9-16
-
-
Braden, B.C.1
Poljak, R.J.2
-
3
-
-
33746309451
-
Structural bioinformatics approaches to understand cross-reactivity
-
Breiteneder H., and Mills C. Structural bioinformatics approaches to understand cross-reactivity. Mol. Nutr. Food Res. 50 (2006) 1-5
-
(2006)
Mol. Nutr. Food Res.
, vol.50
, pp. 1-5
-
-
Breiteneder, H.1
Mills, C.2
-
4
-
-
0032033382
-
Molecular characterization of a cytokinin-inducible periwinkle protein showing sequence homology with pathogenesis-related proteins and the Bet v1 allergen family
-
Carpin S., Laffer S., Schoentgen F., Valenta R., Chénieux J.C., Rideaua M., and Hamdi S. Molecular characterization of a cytokinin-inducible periwinkle protein showing sequence homology with pathogenesis-related proteins and the Bet v1 allergen family. Plant Mol. Biol. 36 5 (1998) 791-798
-
(1998)
Plant Mol. Biol.
, vol.36
, Issue.5
, pp. 791-798
-
-
Carpin, S.1
Laffer, S.2
Schoentgen, F.3
Valenta, R.4
Chénieux, J.C.5
Rideaua, M.6
Hamdi, S.7
-
6
-
-
0031952580
-
Modulation of IgE reactivity of allergens by site directed mutagenesis: potential use of hypoallergenic variants for immunotherapy
-
Ferreira F., Ebner C., Kramer B., Casari G., Briza P., Kungl A.J., Grimm R., Jahn-Schmid B., Breiteneder H., Kraft D., Breitenbach M., Rheinberger H.J., and Scheiner O. Modulation of IgE reactivity of allergens by site directed mutagenesis: potential use of hypoallergenic variants for immunotherapy. FASEB J. 12 2 (1998) 231-242
-
(1998)
FASEB J.
, vol.12
, Issue.2
, pp. 231-242
-
-
Ferreira, F.1
Ebner, C.2
Kramer, B.3
Casari, G.4
Briza, P.5
Kungl, A.J.6
Grimm, R.7
Jahn-Schmid, B.8
Breiteneder, H.9
Kraft, D.10
Breitenbach, M.11
Rheinberger, H.J.12
Scheiner, O.13
-
7
-
-
13244265577
-
Allermatch, a webtool for the prediction of potential allergenicity according to current FAO/WHO Codex alimentarious guidelines
-
Fiers M.W., Kleter G.A., Nilhand H., Peijnenburg A.A., Nap J.P., and van Ham R.C. Allermatch, a webtool for the prediction of potential allergenicity according to current FAO/WHO Codex alimentarious guidelines. BMC Bioinformatics 5 (2004) 133
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 133
-
-
Fiers, M.W.1
Kleter, G.A.2
Nilhand, H.3
Peijnenburg, A.A.4
Nap, J.P.5
van Ham, R.C.6
-
8
-
-
0030471602
-
X-ray and NMR structure of Bet v1, the origin of birch pollen allergy
-
Gajhede M., Osmark P., Paulsen F.M., Ipsen H., Larsen J.N., Joost van Beerven R.J., Schou C., Løwenstein H., and Spangfort M.D. X-ray and NMR structure of Bet v1, the origin of birch pollen allergy. Nat. Struct. Biol. 3 12 (1996) 1040-1045
-
(1996)
Nat. Struct. Biol.
, vol.3
, Issue.12
, pp. 1040-1045
-
-
Gajhede, M.1
Osmark, P.2
Paulsen, F.M.3
Ipsen, H.4
Larsen, J.N.5
Joost van Beerven, R.J.6
Schou, C.7
Løwenstein, H.8
Spangfort, M.D.9
-
9
-
-
0033729843
-
Allergen mimotopes for 3-dimentional epitope search and induction of antibodies inhibiting human IgE
-
Gangenberger E., Grünberger K., Sponer B., Radauer C., Breiteneder H., Boltz-Nitulescu G., Scheiner O., and Jemsen-Joralim E. Allergen mimotopes for 3-dimentional epitope search and induction of antibodies inhibiting human IgE. FASEB J. 14 (2000) 2177-2184
-
(2000)
FASEB J.
, vol.14
, pp. 2177-2184
-
-
Gangenberger, E.1
Grünberger, K.2
Sponer, B.3
Radauer, C.4
Breiteneder, H.5
Boltz-Nitulescu, G.6
Scheiner, O.7
Jemsen-Joralim, E.8
-
10
-
-
0031473847
-
Protein modeling for all
-
Guex N., and Peitsch M.C. Protein modeling for all. Electrophoresis 18 15 (1997) 2714-2723
-
(1997)
Electrophoresis
, vol.18
, Issue.15
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
11
-
-
6344256147
-
Consistant force field studies of intermolecular forces in hydrogen-bondedcrystals. A benchmark for the objective comparison of alternative force fields
-
Hagler A.T., Lifson S., and Dauber P. Consistant force field studies of intermolecular forces in hydrogen-bondedcrystals. A benchmark for the objective comparison of alternative force fields. J. Amer. Chem. Soc. 101 (1979) 5122-5130
-
(1979)
J. Amer. Chem. Soc.
, vol.101
, pp. 5122-5130
-
-
Hagler, A.T.1
Lifson, S.2
Dauber, P.3
-
13
-
-
11344255717
-
Structural relatedness of plant food allergens with specific reference to cross-reactive allergens: an in silico analysis
-
Jenkins J.A. Structural relatedness of plant food allergens with specific reference to cross-reactive allergens: an in silico analysis. J. Aller. Clin. Immunol. 115 (2005) 163-170
-
(2005)
J. Aller. Clin. Immunol.
, vol.115
, pp. 163-170
-
-
Jenkins, J.A.1
-
14
-
-
0024309396
-
IgE and IgG antibodies of patients with allergy to birch pollen as tools to define the allergen profile of Betula verucosa
-
Joralim E., Rumpold H., Endler A.T., Ebner H., Breitenbach M., and Scheiner O. IgE and IgG antibodies of patients with allergy to birch pollen as tools to define the allergen profile of Betula verucosa. Allergy 44 (1989) 385-395
-
(1989)
Allergy
, vol.44
, pp. 385-395
-
-
Joralim, E.1
Rumpold, H.2
Endler, A.T.3
Ebner, H.4
Breitenbach, M.5
Scheiner, O.6
-
15
-
-
0020997912
-
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch W., and Sander C. Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22 12 (1983) 2577-2637
-
(1983)
Biopolymers
, vol.22
, Issue.12
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
16
-
-
0038343131
-
Molecular characterization of recombinant T1, a non-allergenic periwinkle (Catharanthus roseus) protein, with sequence similarity to the Bet v 1 plant allergen family
-
Laffer S., Hamdi S., Lupinek C., Sperr W.R., Valent P., Verdino P., Keller W., Grote M., Hoffmann-Sommergruber K., Scheiner O., Kraft D., Rideau M., and Valenta R. Molecular characterization of recombinant T1, a non-allergenic periwinkle (Catharanthus roseus) protein, with sequence similarity to the Bet v 1 plant allergen family. Biochem. J. 373 Pt 1 (2003) 169-261
-
(2003)
Biochem. J.
, vol.373
, Issue.PART 1
, pp. 169-261
-
-
Laffer, S.1
Hamdi, S.2
Lupinek, C.3
Sperr, W.R.4
Valent, P.5
Verdino, P.6
Keller, W.7
Grote, M.8
Hoffmann-Sommergruber, K.9
Scheiner, O.10
Kraft, D.11
Rideau, M.12
Valenta, R.13
-
18
-
-
0034235234
-
Dominant epitopes and allergic cross-reactivity: complex formation between a fab' fragment of a monoclonal murine IgG antibody and the major allergen from birch pollen Bet v1
-
Mirza O., Henricksen A., Ipsen H., Larsen J.N., Wissenbach M., Spansfort M.D., and Gajhede M. Dominant epitopes and allergic cross-reactivity: complex formation between a fab' fragment of a monoclonal murine IgG antibody and the major allergen from birch pollen Bet v1. J. Immunol. 165 1 (2000) 331-338
-
(2000)
J. Immunol.
, vol.165
, Issue.1
, pp. 331-338
-
-
Mirza, O.1
Henricksen, A.2
Ipsen, H.3
Larsen, J.N.4
Wissenbach, M.5
Spansfort, M.D.6
Gajhede, M.7
-
19
-
-
25644434412
-
A novel approach for investigation of specific and cross-reactive IgE epitopes on Bet v 1 and homologous food allergens in individual patients
-
Mittag D., Batori V., Neudecker P., Wiche R., Friis E.P., Ballmer-Weber B.K., Vieths S., and Roggen E. A novel approach for investigation of specific and cross-reactive IgE epitopes on Bet v 1 and homologous food allergens in individual patients. Mol. Immunol. 43 (2006) 268-278
-
(2006)
Mol. Immunol.
, vol.43
, pp. 268-278
-
-
Mittag, D.1
Batori, V.2
Neudecker, P.3
Wiche, R.4
Friis, E.P.5
Ballmer-Weber, B.K.6
Vieths, S.7
Roggen, E.8
-
20
-
-
0037189581
-
The major birch pollen allergen, Bet v1 shows affinity from a broad spectrum of physiological ligands
-
Mogensen J.E., Wimmer R., Larsen J.N., Spangfort M.D., and Otzen E.E. The major birch pollen allergen, Bet v1 shows affinity from a broad spectrum of physiological ligands. J. Biol. Chem. 277 26 (2002) 23684-23692
-
(2002)
J. Biol. Chem.
, vol.277
, Issue.26
, pp. 23684-23692
-
-
Mogensen, J.E.1
Wimmer, R.2
Larsen, J.N.3
Spangfort, M.D.4
Otzen, E.E.5
-
21
-
-
0037255538
-
Crystal structure of a hypoallergenic isoform of the major birch pollen allergen Bet v1 and its likely biological function as a plant steroid carrier
-
Morković-Housely Z., Degano M., Lamba D., Von Roepenack-Lahaye E., Clemens S., Susani M., Ferreira F., Scheiner O., and Breiteneder H. Crystal structure of a hypoallergenic isoform of the major birch pollen allergen Bet v1 and its likely biological function as a plant steroid carrier. J. Mol. Biol. 325 1 (2003) 123-133
-
(2003)
J. Mol. Biol.
, vol.325
, Issue.1
, pp. 123-133
-
-
Morković-Housely, Z.1
Degano, M.2
Lamba, D.3
Von Roepenack-Lahaye, E.4
Clemens, S.5
Susani, M.6
Ferreira, F.7
Scheiner, O.8
Breiteneder, H.9
-
22
-
-
0035933875
-
Allergenic cross reactivity made visible; Solution structure of the major cherry allergen Pru av1
-
Neudecker P., Schweimer K., Nerkamp J., Scheurer S., Vieths S., Sticht H., and Rosch P. Allergenic cross reactivity made visible; Solution structure of the major cherry allergen Pru av1. J Biol. Chem. 276 25 (2001) 22756-22763
-
(2001)
J Biol. Chem.
, vol.276
, Issue.25
, pp. 22756-22763
-
-
Neudecker, P.1
Schweimer, K.2
Nerkamp, J.3
Scheurer, S.4
Vieths, S.5
Sticht, H.6
Rosch, P.7
-
23
-
-
0344393658
-
Mutational epitope analysis of Pru av 1 and Api g1, the major allergen of Cherry (Prunus avium) and Celery (Apium graveolens): correlating IgE reactivity with three dimensional structure
-
Neudecker P., Lehmann K., Nerkamp J., Haase T., Wangorsch A., Fotisch K., et al. Mutational epitope analysis of Pru av 1 and Api g1, the major allergen of Cherry (Prunus avium) and Celery (Apium graveolens): correlating IgE reactivity with three dimensional structure. Biochem. J. 376 (2003) 97-107
-
(2003)
Biochem. J.
, vol.376
, pp. 97-107
-
-
Neudecker, P.1
Lehmann, K.2
Nerkamp, J.3
Haase, T.4
Wangorsch, A.5
Fotisch, K.6
-
24
-
-
29544433190
-
Pollen allergens are restricted to few protein families and show distinct patterns of species distribution
-
Radauer C., and Breiteneder H. Pollen allergens are restricted to few protein families and show distinct patterns of species distribution. J. Allergy Clin. Immunol. 117 (2006) 141-147
-
(2006)
J. Allergy Clin. Immunol.
, vol.117
, pp. 141-147
-
-
Radauer, C.1
Breiteneder, H.2
-
26
-
-
0035913537
-
Extending the applicability of the non-linear Poisson-Boltzmann equation: multiple dielectric constants and multivalent ions
-
Rocchia W., Alexov E., and Honig B. Extending the applicability of the non-linear Poisson-Boltzmann equation: multiple dielectric constants and multivalent ions. J. Phy. Chem. B. 105 (2001) 507-514
-
(2001)
J. Phy. Chem. B.
, vol.105
, pp. 507-514
-
-
Rocchia, W.1
Alexov, E.2
Honig, B.3
-
27
-
-
0038690253
-
Homology modeling of allergenic cyclophilin: IgE-binding site and structural basis of cross-reactivity
-
Roy D., Ghosh D., and Gupta-Bhattacharya S. Homology modeling of allergenic cyclophilin: IgE-binding site and structural basis of cross-reactivity. BBRC 307 (2003) 422-429
-
(2003)
BBRC
, vol.307
, pp. 422-429
-
-
Roy, D.1
Ghosh, D.2
Gupta-Bhattacharya, S.3
-
28
-
-
0027136282
-
Comparative protein modelling by satisfaction of spatial restraints
-
Sali A., and Bundell T.L. Comparative protein modelling by satisfaction of spatial restraints. J. Mol. Biol. 234 3 (1993) 779-815
-
(1993)
J. Mol. Biol.
, vol.234
, Issue.3
, pp. 779-815
-
-
Sali, A.1
Bundell, T.L.2
-
29
-
-
0033397980
-
Python: A Programming Language for Software Integration and Development
-
Sanner M.F. Python: A Programming Language for Software Integration and Development. J. Mol. Graphics Mod. 17 (1999) 57-61
-
(1999)
J. Mol. Graphics Mod.
, vol.17
, pp. 57-61
-
-
Sanner, M.F.1
-
30
-
-
23644453132
-
Crystal structure of the major Celery allergen Api g1. Molecular analysis of cross reactivity
-
Schirmer T., Hoffiman-Sommergrube K., Susani M., Breiteneder H., and Morovic-Housley Z. Crystal structure of the major Celery allergen Api g1. Molecular analysis of cross reactivity. J. Mol. Biol. 351 5 (2005) 1101-1109
-
(2005)
J. Mol. Biol.
, vol.351
, Issue.5
, pp. 1101-1109
-
-
Schirmer, T.1
Hoffiman-Sommergrube, K.2
Susani, M.3
Breiteneder, H.4
Morovic-Housley, Z.5
-
31
-
-
27744514242
-
Dimerization of major birch pollen allergen Bet v 1 is important for its in vivo IgE cross-linking potential in Mice
-
Schöll I., Kulkarna N., Schedziankova Y., Bergmann A., Verdino P., Knittelfelder R., Kopp T., Hantusch B., Betzel C., Dierks K., Scheiner O., Botz-Nitulescu G., Keller W., and Jensen-joralim E. Dimerization of major birch pollen allergen Bet v 1 is important for its in vivo IgE cross-linking potential in Mice. J. Immunol. 175 (2005) 6645-6650
-
(2005)
J. Immunol.
, vol.175
, pp. 6645-6650
-
-
Schöll, I.1
Kulkarna, N.2
Schedziankova, Y.3
Bergmann, A.4
Verdino, P.5
Knittelfelder, R.6
Kopp, T.7
Hantusch, B.8
Betzel, C.9
Dierks, K.10
Scheiner, O.11
Botz-Nitulescu, G.12
Keller, W.13
Jensen-joralim, E.14
-
32
-
-
0041385755
-
Dominating IgE binding epitopes of Bet v1, the major allergen of Birch pollen, characterized by X-ray crystallography and site directed mutagenesis
-
Spangfort M.D., Mirza O., Ipsen H., Joost van Neerven R.J., Gajhede M., and Larsen J.N. Dominating IgE binding epitopes of Bet v1, the major allergen of Birch pollen, characterized by X-ray crystallography and site directed mutagenesis. J. Immunol. 171 6 (2003) 3084-3090
-
(2003)
J. Immunol.
, vol.171
, Issue.6
, pp. 3084-3090
-
-
Spangfort, M.D.1
Mirza, O.2
Ipsen, H.3
Joost van Neerven, R.J.4
Gajhede, M.5
Larsen, J.N.6
-
33
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighing, position-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighing, position-specific gap penalties and weight matrix choice. Nucleic Acid Res. 22 22 (1994) 4673-4680
-
(1994)
Nucleic Acid Res.
, vol.22
, Issue.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
34
-
-
0028935073
-
Hydrophobic, hydrophilic and other interactions in epitope-paratope binding
-
Van Oss C.J. Hydrophobic, hydrophilic and other interactions in epitope-paratope binding. Mol. Immunol. 32 3 (1995) 199-211
-
(1995)
Mol. Immunol.
, vol.32
, Issue.3
, pp. 199-211
-
-
Van Oss, C.J.1
|