A Pseudo-Response Regulator is misexpressed in the photoperiod insensitive Ppd-D1a mutant of wheat (Triticum aestivum L.)

Theoretical and Applied Genetics

Volumn 115, Issue 5, 2007, Pages 721-733

  Beales, James ^a   Turner, Adrian ^a   Griffiths, Simon ^a   Snape, John W ^a   Laurie, David A ^a  

^a JOHN INNES CENTRE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOSOMES; DIGITAL LIBRARIES; GENE EXPRESSION; MUTAGENESIS; POLYMORPHISM; SENSITIVITY ANALYSIS;

FLOWERING; INSENSITIVITY; PHOTOPERIODS;

CROPS;

VEGETABLE PROTEIN;

ALLELE; AMINO ACID SEQUENCE; ARTICLE; BASE PAIRING; CHEMISTRY; EXON; GENE; GENE DELETION; GENE EXPRESSION REGULATION; GENETIC POLYMORPHISM; GENETICS; MOLECULAR GENETICS; MUTATION; NUCLEOTIDE SEQUENCE; PHOTOPERIODICITY; PLANT CHROMOSOME; TRANSCRIPTION INITIATION SITE; WHEAT;

ALLELES; AMINO ACID SEQUENCE; BASE PAIRING; BASE SEQUENCE; CHROMOSOMES, PLANT; EXONS; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; MOLECULAR SEQUENCE DATA; MUTATION; PHOTOPERIOD; PLANT PROTEINS; POLYMORPHISM, GENETIC; SEQUENCE DELETION; TRANSCRIPTION INITIATION SITE; TRITICUM;

HORDEUM; HORDEUM VULGARE; TRITICUM AESTIVUM;

EID: 34548168528     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-007-0603-4     Document Type: Article

References (52)

1. Allouis S, Moore G, Bellec A, Sharp R, Faivre Rampant P, Mortimer K, Pateyron S, Foote TN, Griffiths S, Caboche M, Chalhoub B (2003) Construction and characterisation of a hexaploid wheat (Triticum aestivum L.) BAC library from the reference germplasm 'Chinese Spring'. Cereal Res Commun 31:331-338
2. Borlaug NE (1983) Contributions of conventional plant breeding to food production. Science 219:689-693
3. Börner A, Korzun V, Worland AJ (1998) Comparative genetic mapping of loci affecting plant height and development in cereals. Euphytica 100:245-248
4. Börner A, Schumann E, Fürste A, Cöster H, Leithold B, Röder MS, Weber WE (2002) Mapping of quantitative trait loci determining agronomic important characters in hexaploid wheat (Triticum aestivum L.). Theor Appl Genet 105:921-936
5. Butterworth KJ (2000) Flowering time genes of wheat and their influence on environmental adaptability. PhD Thesis, University of East Anglia
6. Cockram J, Jones H, Leigh FJ, O'Sullivan D, Powell W, Laurie DA, Greenland AJ (2007) Control of flowering time in temperate cereals: genes, domestication and sustainable productivity. J Exp Bot 58:1231-1244
7. Feschotte C, Wessler SR (2002) Mariner-like transposases are widespread and diverse in flowering plants. Proc Natl Acad Sci USA 99:280-285
8. Feschotte C, Swamy L, Wessler SR (2003) Genome-wide analysis of mariner-like transposable elements in rice reveals complex relationships with Stowaway miniature inverted repeat transposable elements (MITEs). Genetics 163:747-758
9. Fu D, Szucs P, Yan L, Helguera M, Skinner JS, von Zitzewitz J, Hayes PM, Dubcovsky J (2005) Large deletions within the first intron in VRN-1 are associated with spring growth habit in barley and wheat. Mol Genet Genom 273:54-65
10. Fujimori S, Washio T, Tomita M (2005) GC-compositional strand bias around transcription start sites in plants and fungi. BMC Genomics 6: Art. No. 26
11. Griffiths S, Dunford RP, Coupland G, Laurie DA (2003) The evolution of CONSTANS-like gene families in barley (Hordeum vulgare), rice (Oryza sativa) and Arabidopsis thaliana. Plant Physiol 131:1855-1867
12. Hanocq E, Niarquin M, Heumez E, Rousset M, Le Gouis J (2004) Detection and mapping of QTL for earliness components in a bread wheat recombinant inbred lines population. Theor Appl Genet 110:106-115
13. Hayama R, Yokoi S, Tamaki S, Yano M, Shimamoto K (2003) Adaptation of photoperiodic control pathways produces short-day flowering in rice. Nature 422:719-722
14. Islam-Faridi MN (1988) Genetical studies of grain protein and developmental characters in wheat. PhD Thesis, University of Cambridge
15. Kato K, Yokoyama H (1992) Geographical variation in heading characters among wheat landraces, Triticum aestivum L, and its implication for their adaptability. Theor Appl Genet 84:259-265
16. Kojima S, Takahashi Y, Kobayashi Y, Monna L, Sasaki T, Araki T, Yano M (2002) Hd3a, a rice ortholog of the Arabidopsis FT gene, promotes transition to flowering downstream of Hd1 under short-day conditions. Plant Cell Physiol 43:1096-1105
17. Laurie DA (1997) Comparative genetics of flowering time in cereals. Plant Mol Biol 35:167-177
18. Laurie DA, Pratchett N, Bezant JH, Snape JW (1995) RFLP mapping of five major genes and eight quantitative trait loci controlling flowering time in a winter × spring barley (Hordeum vulgare L.) cross. Genome 38:575-585
19. Law CN (1987) The genetic control of day-length response in wheat. In: Atherton JE (ed) Manipulation of flowering. Butterworths, London, pp 225-240
20. Law CN, Sutka J, Worland AJ (1978) A genetic study of day-length response in wheat. Heredity 41:185-191
21. Law CN, Worland AJ (1997) Genetic analysis of some flowering time and adaptive traits in wheat. New Phytol 137:19-28
22. Lin HX, Yamamoto T, Sasaki T, Yano M (2000) Characterization and detection of epistaic interactions of 3 QTLs, Hd1, Hd2, and Hd3, controlling heading date in rice using nearly isogenic lines. Theor Appl Genet 101:1021-1028
23. Matsushika A, Makino S, Kojima M, Mizuno T (2000) Circadian waves of expression of the APRR1/TOC1 family of pseudo-response regulators in Arabidopsis thaliana: Insight into the plant circadian clock. Plant Cell Physiol 41:1002-1012
24. McIntosh RA, Yamazaki Y, Devos KM, Dubcovsky J, Rogers WJ, Appels R (2003) Catalogue of gene symbols in wheat. http://wheat.pw.usda.gov/ggpages/wgc/ 2003/
25. Mizuno T, Nakamichi N (2005) Pseudo-response regulators (PRRs) or true oscillator components (TOCs). Plant Cell Physiol 46:677-685
26. Mohler V, Lukman R, Ortiz-Islas S, William M, Worland AJ, van Beem J, Wenzel G (2004) Genetic and physical mapping of photoperiod insensitive gene Ppd-B1 in common wheat. Euphytica 138:33-40
27. Murakami M, Ashikari M, Miura K, Yamashino T, Mizuno T (2003) The evolutionarily conserved OsPRR quintet: rice pseudo-response regulators implicated in circadian rhythm. Plant Cell Physiol 44:1229-1236
28. Murakami M, Matsushika A, Ashikari M, Yamashino T, Mizuno T (2005) Circadian-associated rice pseudo response regulators (OsPRRs): insight into the control of flowering time. Biosci Biotechnol Biochem 69:410-414
29. Ramakers C, Ruijter JM, Deprez RHL, Moorman AFM (2003) Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neurosci Lett 339:62-66
30. Robson F, Costa MMR, Hepworth SR, Vizir I, Pineiro M, Reeves PH, Putterill J, Coupland G (2001) Functional importance of conserved domains in the flowering-time gene CONSTANS demonstrated by analysis of mutant alleles and transgenic plants. Plant J 28:619-631
31. Samach A, Onouchi H, Gold SE, Ditta GS, Schwarz-Sommer Z, Yanofsky MF, Coupland G (2000) Distinct roles of CONSTANS target genes in reproductive development of Arabidopsis. Science 288:1613-1616
32. Scarth R, Law CN (1983) The location of the photoperiodic gene, Ppd2, and an additional genetic factor for ear-emergence on chromosome 2B of wheat. Heredity 51:607-619
33. Scarth R, Law CN (1984) The control of the day-length response in wheat by the group 2 chromosomes. Z Pflanzenzuchtg 92:140-150
34. Sharp PJ, Kreis M, Shewry PR, Gale MD (1988) Location of B-amylase sequences in wheat and its relatives. Theor Appl Genet 75:286-290
35. Skøt L, Humphreys MO, Armstead I, Heywood S, Skot KP, Sanderson R, Thomas ID, Chorlton KH, Hamilton NRS (2005) An association mapping approach to identify flowering time genes in natural populations of Lolium perenne (L.) Mol Breed 15:233-245
36. Strayer C, Oyama T, Schultz TF, Raman R, Somers DE, Mas P, Panda S, Kreps JA, Kay SA (2000) Cloning of the Arabidopsis clock gene TOC1, an autoregulatory response regulator homolog. Science 289:768-771
37. Suárez-López P, Wheatley K, Robson F, Onouchi H, Valverde F, Coupland G (2001) CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis. Nature 410:1116-1119
38. Thomas B, Vince-Prue D (1997) Photoperiodism in plants. 2nd edn. Academic, London
39. Turner A, Beales J, Faure S, Dunford RP, Laurie DA (2005) The pseudo-response regulator Ppd-H1 provides adaptation to photoperiod in barley. Science 310:1031-1034
40. Valverde F, Mouradov A, Soppe W, Ravenscroft D, Samach A, Coupland G (2004) Photoreceptor regulation of CONSTANS protein in photoperiodic flowering. Science 303:1003-1006
41. Welsh JR, Keim DL, Pirasteh B, Richards RD (1973) Genetic control of photoperiod response in wheat. In: Proceedings of 4th International Wheat Genet Symposium. University of Missouri, Columbia, MO, USA, pp 879-884
42. Worland AJ (1999) The importance of Italian wheats to worldwide varietal improvement. J Genet Breed 53:165-173
43. Worland AJ, Law CN (1986) Genetic-analysis of chromosome 2D of wheat. 1. The location of genes affecting height, day-length insensitivity, hybrid dwarfism and yellow-rust resistance. Z Pflanzenzuchtung 96:331-345
44. Worland T, Snape JW (2001) Genetic basis of worldwide wheat varietal improvement. In: Bonjean AP, Angus WJ (eds) The world wheat book: a history of wheat breeding. Lavoisier Publishing, Paris, pp 59-100
45. Worland AJ, Appendino ML, Sayers EJ (1994) The distribution in European winter wheats of genes that influence ecoclimatic adaptability whilst determining photoperiodic insensitivity and plant height. Euphytica 80:219-228
46. Worland AJ, Börner A, Korzun V, Li WM, Petrovic S, Sayers EJ (1998) The influence of photoperiod genes to the adaptability of European winter wheats. Euphytica 100:385-394
47. Yan L, Loukoianov A, Tranquilli G, Helguera M, Fahima T, Dubcovsky J (2003) Positional cloning of the wheat vernalization gene VRN1. Proc Natl Acad Sci USA 100:6263-6268
48. Yan LL, Loukoianov A, Blechl A, Tranquilli G, Ramakrishna W, SanMiguel P, Bennetzen JL, Echenique V, Dubcovsky J (2004) The wheat VRN2 gene is a flowering repressor down-regulated by vernalization. Science 303:1640-1644
49. Yan L, Fu D, Li C, Blechl A, Tranquilli G, Bonafede M, Sanchez A, Valarik M, Yasuda S, Dubcovsky J (2006) The wheat and barley vernalization gene VRN3 is an orthologue of FT. Proc Natl Acad Sci USA 103:19581-19586
50. Yano M, Katayose Y, Ashikara M, Yamanouchi U, Monna L, Fuse T, Baba T, Yamamoto K, Umehara Y, Nagamura Y, Sasaki T (2000) Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS. Plant Cell 12:2473-2483
51. Zeilinger MN, Farre EM, Taylor SR, Kay SA, Doyle FJ (2006) A novel computational model of the circadian clock in Arabidopsis that incorporates PRR7 and PRR9. Molecular Systems Biology 2: Art. No. 58
52. Zhao XY, Liu MS, Li JR, Guan CM, Zhang XS (2005) The wheat TaGI1, involved in photoperiodic flowering, encodesan Arabidopsis GI ortholog. Plant Mol Biol 58:53-64