Comparative genetics of flowering time

Plant Molecular Biology

Volumn 35, Issue 1-2, 1997, Pages 167-177

  Laurie, David A ^a  

^a JOHN INNES CENTRE   (United Kingdom)

Author keywords

Arabidopsis; Barley; Comparative genetics; Earliness; Flowering time (heading date); Photoperiod; Rice; Vernalization; Wheat

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; HORDEUM VULGARE SUBSP. VULGARE; TRITICUM AESTIVUM;

EID: 0031239167     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/978-94-011-5794-0_16     Document Type: Article

References (64)

1. Backes G, Graner A, Foroughi-Weir B, Fischbeck G, Wenzel G, Jahoor A: Localization of quantitative trait loci (QTL) for agronomic important characters by the use of a RFLP map in barley (Hordeum vulgare L.). Theor Appl Genet 90: 294-302 (1995).
2. Bensen RJ, Johal GS, Crane VC, Tossberg JT, Schnable PS, Meeley RB, Briggs SP: Cloning and characterization of the maize An1 gene. Plant Cell 7: 75-84 (1995).
3. Bennetzen JL, Freeling M: Grasses as a single genetic system: genome analysis, colinearity and compatibility. Trends Genet 9: 259-261 (1993).
4. Bezant JH, Laurie DA, Pratchett N, Chojecki J, Kearsey MJ: Marker regression mapping of QTL controlling flowering time and plant height in a spring barley (Hordeum vulgare L.) cross. Heredity 77: 64-73 (1996).
5. Burn JE, Bagnall DJ, Metzger JD, Dennis ES, Peacock WJ: DNA methylation, vernalization, and the initiation of flowering. Proc Natl Acad Sci USA 90: 287-291 (1993).
6. Causse M, Fulton TM, Cho YG, Ahn SN, Chunwongse J, Wu K, Xiao J, Yu Z, Ronald PC, Harrington SB, Second GA, McCouch SR, Tanksley SD: Saturated molecular map of the rice genome based on an interspecific backcross population. Genetics 138: 1251-1274 (1994).
7. Chory J, Cook RK, Dixon R, Elich T, Li HM, Lopez E, Mochizuki N, Nagpal P, Pepper A, Poole D, Reed J: Signal-transduction pathways controlling light-regulated development in Arabidopsis. Phil Trans R Soc Lond B 350: 59-65 (1995).
8. Collinson ST, Ellis RH, Summerfield RJ, Roberts EH: Durations of the photoperiod-sensitive and photoperiod-insensitive phases of development to flowering in four cultivars of rice (Orzya saliva L.). Ann Bot 70: 339-346 (1992).
9. Coupland G: Regulation of flowering time: Arabidopsis as a model system to study genes that promote or delay flowering. Phil Trans R Soc Lond B 350: 27-34 (1995).
10. Dennis ES, Finnegan EJ, Bilodeau P, Chaudhury A, Genger R, Helliwell CA, Sheldon CC, Bagnall DJ, Peacock WJ: Vernalization and the initiation of flowering. Semin Cell Devel Biol 7: 441-448 (1996).
11. Devos KM, Gale MD: The genetic maps of wheat and their potential in plant breeding. Outlook Agric 22: 93-99 (1993).
12. Devos KM, Chao S, Li QY, Simonetti MC, Gale MD: Relationship between chromosome 9 of maize and wheat homoeologous group 7 chromosomes. Genetics 138: 1287-1292 (1994).
13. Devos KM, Dubcovsky J, Dvorak J, Chinoy CN, Gale MD: Structural evolution of wheat chromosomes 4A, 5A, and 7B and its impact on recombination. Theor Appl Genet 91: 282-288 (1995).
14. Dubcovsky J, Luo MC, Zhong GY, Bransteitter R, Desai A, Kilian A, Kleinhofs A, Dvořák J: Genetic map of diploid wheat, Triticum monococcum L., and its comparison with maps of Hordeum vulgare L. Genetics 143: 983-999 (1996).
15. Dunford RP, Kurata N, Laurie DA, Money TA, Minobe Y, Moore G: Conservation of fine-scale DNA marker order in the genomes of rice and the Triticeae. Nucl Acids Res 23: 2724-2728 (1995).
16. Ellis RH, Summerfield RJ, Edmeades GO, Roberts EH: Photoperiod, leaf number, and interval from tassel initiation to emergence in diverse cultivars of maize. Crop Sci 32: 398-403 (1992).
17. Ellis RH, Summerfield RJ, Edmeades GO, Roberts EH: Photoperiod, temperature, and the interval from sowing to tassel initiation in diverse cultivars of maize. Crop Sci 32: 1225-1232 (1992).
18. Fischer A, Baum N, Saedler H, Theissen G: Chromosomal mapping of the MADS-box multigene family in Zea mays reveals dispersed distribution of allelic genes as well as transposed copies. Nucl Acids Res 23: 1901-1911 (1995).
19. R allele. Plant Physiol 105: 941-948 (1994).
20. Gallagher LW, Soliman KM, Vivar H: Interactions among loci conferring photoperiod insensitivity for heading time in spring barley. Crop Sci 31: 256-261 (1991).
21. Galiba G, Quarrie SA, Sutka J, Morgounov A, Snape JW: RFLP mapping of the vernalization (Vrn1) and frost resistance (Fr1) genes on chromosome 5A of wheat. Theor Appl Genet 90: 1174-1179 (1995).
22. Hayes PM, Liu BH, Knapp SJ, Chen F, Jones B, Blake T, Franckowiak J, Rasmusson D, Sorrells M, Ullrich SE, Wesenberg D, Kleinhofs A: Quantitative trait locus effects and environmental interaction in a sample of North American barley germ plasm. Theor Appl Genet 87: 392-401 (1993).
23. Hicks K, Sundås A, Meeks-Wagner DR: Arabidopsis early-flowering mutants reveal multiple levels of regulation in the vegetative-to-floral transition. Semin Cell Devel Biol 7: 409-418 (1996).
24. Hu J, Anderson B, Wessler SR: Isolation and characterization of rice R genes: evidence for distinct evolutionary paths in rice and maize. Genetics 142: 1021-1031 (1996).
25. Kilian A, Kudrna DA, Kleinhofs A, Yano M, Kurata N, Steffenson B, Sasaki T: Rice-barley synteny and its application to saturation mapping of the barley Rpg1 region. Nucl Acids Res 23: 2729-2733 (1995).
26. Koester RP, Sisco PH, Stuber CW: Identification of quantitative trait loci controlling days to flowering and plant height in two near isogenic lines of maize. Crop Sci 33: 1209-1216 (1993).
27. Kurata N, Moore G, Nagamura Y, Foote T, Yano M, Minobe Y, Gale MD: Conservation of genome structure between rice and wheat. Bio/technology 12: 276-278 (1994).
28. Kurata N, Nagamura Y, Yamamoto K, Harushima Y, Sue N, Wu J, Antonio BA, Shomura A, Shimizu T, Lin SY, Inoue T, Fukuda A, Shimano T, Kuboki Y, Toyama T, Miyamoto Y, Kirihara T, Hayasaka K, Miyao A, Monna L, Zhong HS, Tamura Y, Wang ZX, Momma T, Umehara Y, Yano M, Sasaki T, Minobe Y: A 300 kilobase interval genetic map of rice including 883 expressed sequences. Nature Genetics 8: 365-372 (1994).
29. Lagercrantz U, Putterill J, Coupland G, Lydiate D: Comparative mapping in Arabidopsis and Brassica, fine scale genome collinearity and congruence of genes controlling flowering time. Plant J 9: 13-20 (1996).
30. Laurie DA, Pratchett N, Bezant JH, Snape JW: Genetic analysis of a photoperiod response gene on the short arm of chromosome 2(2H) of barley (Hordeum vulgare L.). Heredity 72: 619-627 (1994).
31. Laurie DA, Pratchett N, Bezant JH, Snape JW: RFLP mapping of five major genes and eight quantitative trait loci controlling flowering time in a winter x spring barley (Hordeum vulgare L.) cross. Genome 38: 575-585 (1995).
32. Law CN, Dean C, Coupland G: Genes controlling flowering and strategies for their isolation and characterization. In: Jordan BR (ed) The Molecular Biology of Flowering, pp. 47-68. ed. CAB International, Oxford (1993).
33. Li Z, Pinson SRM, Stansel JW, Park WD: Identification of quantitative trait loci (QTLs) for heading date and plant height in cultivated rice (Oryza saliva L.). Theor Appl Genet 91: 374-381 (1995).
34. Lin YR, Schertz KF, Paterson AH: Comparative analysis of QTLs affecting plant height and maturity across the Poaceae, in reference to an interspecific sorghum population. Genetics 141: 391-411 (1995).
35. Martinez-Zapater JM, Coupland G, Dean C, Koorneef M: The transition to flowering in Arabidopsis. In: Meyerowitz EM, Somerville CR (eds) Arabidopsis, pp. 403-433. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1994).
36. Millar AJ, Straume M, Chory J, Chua NH, Kay SA: The regulation of circadian period by phototransduction pathways in Arabidopsis. Science 267: 1163-1166 (1995).
37. Moore G, Gale MD, Kurata N, Flavell RB: Molecular analysis of small grain cereal genomes: current status and prospects. Bio/technology 11: 584-589 (1993).
38. Moore G, Devos KM, Wang Z, Gale MD: Grasses, line up and form a circle. Curr Biol 5: 737-739 (1995).
39. Murray EE, Lotzer J, Eberle M: Codon usage in plant genes. Nucl Acids Res 17: 477-498 (1989).
40. Nelson JC, Sorrells ME, Van Deynze AE, Lu YH, Atkinson M, Bernard M, Leroy P, Paris JD, Anderson JA: Molecular mapping of wheat: major genes and rearrangements in homoeologous groups 4, 5 and 7. Genetics 141: 721-731 (1995).
41. Pan A, Hayes PM, Chen F, Chen THH, Blake T, Wright S, Karsai I, Bedö Z (1994) Genetic analysis of the components of winterhardiness in barley (Hordeum vulgare L.). Theor Appl Genet 89: 900-910.
42. Paterson AH, Lin YR, Li Z, Schertz KF, Doebley JF, Pinson SRM, Liu SC, Stansel JW, Irvine JE: Convergent domestication of cereal crops by independent mutations at corresponding genetic loci. Science 269: 1714-1718 (1995).
43. Peeters AJM, Koorneef M: Genetic variation in flowering time in Arabidopsis thaliana. Semin Cell Devel Biol 7: 381-389 (1996).
44. Plaschke J, Börner A, Xie DX, Koebner RMD, Schlegel R, Gale MD: RFLP mapping of genes affecting plant height and growth habit in rye. Theor Appl Genet 85: 1049-1054 (1993).
45. Poonyarit M, Mackill DJ, Vergara BS: Genetics of photoperiod sensitivity and critical daylength in rice. Crop Sci 29: 647-652 (1989).
46. Putterill J, Robson F, Lee K, Simon R, Coupland G: The CONSTANS gene of Arabidopsis promotes flowering and encodes a protein showing similarities to zinc finger transcription factors. Cell 80: 847-858 (1995).
47. Qi X, Stam P, Lindhout P: Comparison and integration of four barley genetic maps. Genome 39: 379-394 (1996).
48. Roberts EH, Summerfield RJ, Cooper JP, Ellis RH: Environmental control of flowering in barley (Hordeum vulgare L.). I. Photoperiod limits to long-day responses, photoperiod-insensitive phases and effects of low-temperature and short-day vernalization. Ann Bot 62: 127-144 (1988).
49. Robertson DS: A possible technique for isolating genic DNA for quantitative traits in plants. J Theor Biol 117: 1-10 (1985).
50. Saghai Maroof MA, Yang GP, Biyashev RM, Maughan PJ, Zhang Q: Analysis of the barley and rice genomes by comparative RFLP linkage mapping. Theor Appl Genet 92: 541-551 (1996).
51. Sasaki T, Yano M, Kurata N, Yamamoto K: The Japanese Rice Genome research program. Genome Res 6: 661-666 (1996).
52. Schmidt RJ, Veit B, Mandel MA, Mena M, Hake S, Yanofsky MF: Identification and molecular characterization of ZAG1, the maize homologue of the Arabidopsis floral homeotic gene AGAMOUS. Plant Cell 5: 729-737 (1993).
53. Simon R, Coupland G: Arabidopsis genes that regulate flowering time in response to day-length. Semin Cell Devel Biol 7: 419-425 (1996).
54. Snape JW, Quarrie SA, Laurie DA: Comparative mapping and its use for the genetic analysis of agronomic characters in wheat. Euphytica 89: 27-31 (1996).
55. Takahashi R, Yasuda S: Genetics of earliness and growth habit in barley. In: Nilan RA (ed) Proceedings Proc 2nd International Barley Genetics Symposium, pp. 388-408. Washington State University Press (1971).
56. Tanksley SD, Ganal MW, Martin GB: Chromosome landing: a paradigm for map-based cloning in plants with large genomes. Trends Genet 11: 63-68 (1995).
57. Theissen G, Saedler H: MADS-box genes in plant ontogeny and phylogeny: Haeckel's 'biogenetic law' revisited. Curr Opin Genet Devel 5: 628-639 (1995).
58. Theissen G, Strater T, Fischer A, Saedler H: Structural characterization, chromosomal localization and phylogenetic evaluation of two pairs of AGAMOUS-like MADS-box genes from maize. Gene 156: 155-166 (1995).
59. Van Deynze AE, Nelson JC, Yglesias ES, Harrington SE, Braga DP, McCouch SR, Sorrells ME: Comparative mapping in grasses. Wheat relationships. Mol Gen Genet 248: 744-754 (1995).
60. Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Homes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M: AFLP: a new technique for DNA fingerprinting. Nucl Acids Res 23: 4407-4414 (1995).
61. Wilson A, Dean C: Analysis of the molecular basis of vernalization in Arabidopsis thaliana. Semin Cell Devel Biol 7: 435-440 (1996).
62. Worland AJ: The influence of flowering time genes on environmental adaptibility in European wheats. Euphytica 89: 49-57 (1996).
63. Worland AJ, Börner A, Korzun V, Li MW, Petrovic̀ S, Sayers EJ: The influence of photoperiod genes to the adaptibility of European winter wheats. Proceedings 5th International Wheat Conference, Ankara, Turkey, 1996 (in press).
64. Yano M, Harushima Y, Nagamura Y, Kurata N, Sasaki T, Minobe Y: QTL analysis as an aid to tagging genes conferring heading date in rice. Proceedings 3rd International Rice Genetics Symposium, International Rice Research Institute, Manila (in press).