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Volumn 48, Issue 7, 2007, Pages 3239-3245

High-resolution genome profiling differentiated Staphylococcus epidermidis isolated from patients with ocular infections and normal individuals

Author keywords

[No Author keywords available]

Indexed keywords

ADOLESCENT; ADULT; AGED; AMPLIFIED FRAGMENT LENGTH POLYMORPHISM; ARTICLE; BACTERIAL STRAIN; BACTERIAL VIRULENCE; BACTERIUM ISOLATION; BIOFILM; CHILD; CLINICAL ARTICLE; CLUSTER ANALYSIS; EBH GENE; ENDOPHTHALMITIS; EYE INFECTION; FEMALE; GENE; GENETIC VARIABILITY; GENOME ANALYSIS; GENOTYPE; HUMAN; ICAAB GENE; KERATITIS; MALE; MICROTITER PLATE ASSAY; PHENOTYPE; POLYMERASE CHAIN REACTION; POPULATION DYNAMICS; PRIORITY JOURNAL; PTSI GENE; SEPA GENE; STAPHYLOCOCCUS EPIDERMIDIS; TAGD GENE; BACTERIAL EYE INFECTION; BACTERIAL GENOME; BACTERIUM IDENTIFICATION; FLUORESCENCE; GENE EXPRESSION PROFILING; GENETICS; GROWTH, DEVELOPMENT AND AGING; INFANT; ISOLATION AND PURIFICATION; MICROBIOLOGY; MIDDLE AGED; PRESCHOOL CHILD; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; STAPHYLOCOCCUS INFECTION;

EID: 34548097602     PISSN: 01460404     EISSN: None     Source Type: Journal    
DOI: 10.1167/iovs.06-1365     Document Type: Article
Times cited : (27)

References (35)
  • 1
    • 0023758448 scopus 로고
    • Laboratory, clinical, and epidemiological aspects of coagulase-negative staphylococci
    • Pfaller MA, Herwaldt LA. Laboratory, clinical, and epidemiological aspects of coagulase-negative staphylococci. Clin Microbiol Rev. 1988;1:281-299.
    • (1988) Clin Microbiol Rev , vol.1 , pp. 281-299
    • Pfaller, M.A.1    Herwaldt, L.A.2
  • 2
    • 0346729852 scopus 로고    scopus 로고
    • Endophthalmitis isolates and antibiotic sensitivities: A 6 year review of culture proven cases
    • Matthew SB, Ingrid U, Harry W, Nichard U, Darlene M. Endophthalmitis isolates and antibiotic sensitivities: a 6 year review of culture proven cases. Am J Ophthalmology. 2004;137:38-48.
    • (2004) Am J Ophthalmology , vol.137 , pp. 38-48
    • Matthew, S.B.1    Ingrid, U.2    Harry, W.3    Nichard, U.4    Darlene, M.5
  • 4
    • 0033944712 scopus 로고    scopus 로고
    • Performance of phenotypic and genotypic methods to determine the clinical relevance of serial blood isolates of Staphylococcus epidermidis in patients with septicemia
    • Sloos JH, Dijkshoorn L, Vogel L, van Boven CP. Performance of phenotypic and genotypic methods to determine the clinical relevance of serial blood isolates of Staphylococcus epidermidis in patients with septicemia. J Clin Microbiol. 2000;38:2488-2493.
    • (2000) J Clin Microbiol , vol.38 , pp. 2488-2493
    • Sloos, J.H.1    Dijkshoorn, L.2    Vogel, L.3    van Boven, C.P.4
  • 5
    • 0030967979 scopus 로고    scopus 로고
    • The source of coagulase-negative staphylococci in the Endophthalmitis Vitrectomy Study: A comparison of eyelid and intraocular isolates using pulsed-field gel electrophoresis
    • BannermanTL, Rhoden DL, McAllister SK, Miller JM, Wilson LA. The source of coagulase-negative staphylococci in the Endophthalmitis Vitrectomy Study: a comparison of eyelid and intraocular isolates using pulsed-field gel electrophoresis. Arch Ophthalmol. 1997;115:357-361.
    • (1997) Arch Ophthalmol , vol.115 , pp. 357-361
    • Bannerman, T.L.1    Rhoden, D.L.2    McAllister, S.K.3    Miller, J.M.4    Wilson, L.A.5
  • 6
    • 0025875354 scopus 로고
    • Role of external bacterial flora in the pathogenesis of acute postoperative endophthalmitis
    • Speaker MG, Milch FA, Shah MK, Eisner W, Kreiswirth BN. Role of external bacterial flora in the pathogenesis of acute postoperative endophthalmitis. Ophthalmology. 1991;98:639-649.
    • (1991) Ophthalmology , vol.98 , pp. 639-649
    • Speaker, M.G.1    Milch, F.A.2    Shah, M.K.3    Eisner, W.4    Kreiswirth, B.N.5
  • 7
    • 0033964624 scopus 로고    scopus 로고
    • PCR-based assay for discrimination between invasive and contaminating Staphylococcus epidermidis strains
    • Frebourg NB, Lefebvre S, Baert S, Lameland JM. PCR-based assay for discrimination between invasive and contaminating Staphylococcus epidermidis strains. J Clin Microbiol. 2000;38:877-880.
    • (2000) J Clin Microbiol , vol.38 , pp. 877-880
    • Frebourg, N.B.1    Lefebvre, S.2    Baert, S.3    Lameland, J.M.4
  • 8
    • 32044465755 scopus 로고    scopus 로고
    • Kenchappa P, Duggirala A, Ahmed N, Pathangey A, Hasnain SE, Sharma S. Fluorescent amplified fragment length polymorphism genotyping demonstrates the role of biofilm-producing methicillin-resistant periocular Staphylococcus epidermidis strains in postoperative endophthalmitis. BMC Ophthalmol. 2006. [serial online DOI:10.1186/1471-2415-6-1].
    • Kenchappa P, Duggirala A, Ahmed N, Pathangey A, Hasnain SE, Sharma S. Fluorescent amplified fragment length polymorphism genotyping demonstrates the role of biofilm-producing methicillin-resistant periocular Staphylococcus epidermidis strains in postoperative endophthalmitis. BMC Ophthalmol. 2006. [serial online DOI:10.1186/1471-2415-6-1].
  • 9
    • 0032015908 scopus 로고    scopus 로고
    • AFLP™ typing of Staphylococcus epidermidis in multiple sequential blood cultures
    • Sloos JH, Janssen P, van Boven CP, Dijkshoorn L. AFLP™ typing of Staphylococcus epidermidis in multiple sequential blood cultures. Res Microbiol. 1998;149:221-228.
    • (1998) Res Microbiol , vol.149 , pp. 221-228
    • Sloos, J.H.1    Janssen, P.2    van Boven, C.P.3    Dijkshoorn, L.4
  • 10
    • 15244349729 scopus 로고    scopus 로고
    • Natural population dynamics and expansion of pathogenic clones of Staphylococcus aureus
    • Melles DC, Gorkink RFJ, Boelens HAM, et al. Natural population dynamics and expansion of pathogenic clones of Staphylococcus aureus. J Clin Invest. 2004;114:1732-1740.
    • (2004) J Clin Invest , vol.114 , pp. 1732-1740
    • Melles, D.C.1    Gorkink, R.F.J.2    Boelens, H.A.M.3
  • 11
    • 0032878117 scopus 로고    scopus 로고
    • Amplified-fragment length polymorphism analysis: The state of an art
    • Savelkoul PH, Aarts HJ, Haas J, et al. Amplified-fragment length polymorphism analysis: the state of an art. J Clin Microbiol. 1999; 37:3083-3091.
    • (1999) J Clin Microbiol , vol.37 , pp. 3083-3091
    • Savelkoul, P.H.1    Aarts, H.J.2    Haas, J.3
  • 12
    • 0142061186 scopus 로고    scopus 로고
    • Risk factors for antibiotic-resistant conjunctival bacterial flora in patients undergoing intraocular surgery
    • Mino de Kaspar H, Shriver EM, Nguyen EV, et al. Risk factors for antibiotic-resistant conjunctival bacterial flora in patients undergoing intraocular surgery. Graefes Arch Clin Exp Ophthalmol. 2003; 41:730-733.
    • (2003) Graefes Arch Clin Exp Ophthalmol , vol.41 , pp. 730-733
    • Mino de Kaspar, H.1    Shriver, E.M.2    Nguyen, E.V.3
  • 13
    • 0026569460 scopus 로고
    • Correlation between regulation of mecA transcription and expression of methicillin resistance in staphylococci
    • Ryffel C, Kayser FH, Berger-Bachi B. Correlation between regulation of mecA transcription and expression of methicillin resistance in staphylococci. Antlmicrob Agents Chemother. 1992;36:25-31.
    • (1992) Antlmicrob Agents Chemother , vol.36 , pp. 25-31
    • Ryffel, C.1    Kayser, F.H.2    Berger-Bachi, B.3
  • 14
    • 0028260493 scopus 로고
    • Isolation and characterization of a novel 20-kDa sulfated polysaccharide from the extracellular slime layer of Staphylococcus epidermidis
    • Arvaniti A, Karamanos NK, Dimitracopoulos G, Anastassiou ED. Isolation and characterization of a novel 20-kDa sulfated polysaccharide from the extracellular slime layer of Staphylococcus epidermidis. Arch Biochem Biophys. 1994;308:432-438.
    • (1994) Arch Biochem Biophys , vol.308 , pp. 432-438
    • Arvaniti, A.1    Karamanos, N.K.2    Dimitracopoulos, G.3    Anastassiou, E.D.4
  • 15
    • 0023491905 scopus 로고
    • Phenotypic variation of Staphylococcus epidermidis slime production in vitro and in vivo
    • Christensen GD, Baddour LM, Simpson WA. Phenotypic variation of Staphylococcus epidermidis slime production in vitro and in vivo. Infect Immun. 1987;55:2870-2877.
    • (1987) Infect Immun , vol.55 , pp. 2870-2877
    • Christensen, G.D.1    Baddour, L.M.2    Simpson, W.A.3
  • 16
    • 0141454848 scopus 로고    scopus 로고
    • Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC12228)
    • Zhang YQ, Ren SX, Li YX, et al. Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC12228). Mol Microbiol. 2003;49:1577-1593.
    • (2003) Mol Microbiol , vol.49 , pp. 1577-1593
    • Zhang, Y.Q.1    Ren, S.X.2    Li, Y.X.3
  • 17
    • 79961161584 scopus 로고    scopus 로고
    • Performance Standards for Antimicrobial Disk Susceptibility Test
    • National Committee for Clinical Laboratory Standards, Vilianova, PA: NCCLS;
    • National Committee for Clinical Laboratory Standards. Performance Standards for Antimicrobial Disk Susceptibility Test. Approved standard M2-T4. Vilianova, PA: NCCLS; 1998.
    • (1998) Approved standard M2-T4
  • 18
    • 0036169739 scopus 로고    scopus 로고
    • Rapid identification of Streptococcus intermedius by PCR with the ily gene as a species marker gene
    • Goto T, Nagamune H, Miyazaki A, et al. Rapid identification of Streptococcus intermedius by PCR with the ily gene as a species marker gene. J Med Microbiol. 2002;51:178-186.
    • (2002) J Med Microbiol , vol.51 , pp. 178-186
    • Goto, T.1    Nagamune, H.2    Miyazaki, A.3
  • 19
    • 0033827782 scopus 로고    scopus 로고
    • Rapid extraction from and direct identification in clinical samples of methicillin-resistant staphylococci using the PCR
    • Jaffe RI, Lane JD, Albury SV, Niemeyer DM. Rapid extraction from and direct identification in clinical samples of methicillin-resistant staphylococci using the PCR. J Clin Microbiol. 2000;38:3407-3412.
    • (2000) J Clin Microbiol , vol.38 , pp. 3407-3412
    • Jaffe, R.I.1    Lane, J.D.2    Albury, S.V.3    Niemeyer, D.M.4
  • 20
    • 0024400571 scopus 로고
    • New method for detecting slime production by coagulase negative staphylococci
    • Freeman DJ, Falkiner FR, Keane CT. New method for detecting slime production by coagulase negative staphylococci. J Clin Pathol. 1989;42:872-874.
    • (1989) J Clin Pathol , vol.42 , pp. 872-874
    • Freeman, D.J.1    Falkiner, F.R.2    Keane, C.T.3
  • 22
    • 0028834605 scopus 로고
    • AFLP. A new technique for DNA fingerprinting
    • Vos P, Hogers R, Bleeker M, et al. AFLP. A new technique for DNA fingerprinting. Nucleic Acids Res. 1995;23:4407-4414.
    • (1995) Nucleic Acids Res , vol.23 , pp. 4407-4414
    • Vos, P.1    Hogers, R.2    Bleeker, M.3
  • 23
    • 20144372744 scopus 로고    scopus 로고
    • Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methiciliin resistant Staphylococcus epidermidis strain
    • Gill SR, Derrick EF, Gordoun LA, et al. Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methiciliin resistant Staphylococcus epidermidis strain. J Bacteriol. 2005;187:2426-2438.
    • (2005) J Bacteriol , vol.187 , pp. 2426-2438
    • Gill, S.R.1    Derrick, E.F.2    Gordoun, L.A.3
  • 24
    • 1842455190 scopus 로고    scopus 로고
    • In silico analysis of complete bacterial genomes: PCR, AFLP-PCR, and endonuclease restriction
    • Bikandi J, Millán RS, Rementeri A, Garaizar J. In silico analysis of complete bacterial genomes: PCR, AFLP-PCR, and endonuclease restriction. Bioinformatics. 2004;20:798-799.
    • (2004) Bioinformatics , vol.20 , pp. 798-799
    • Bikandi, J.1    Millán, R.S.2    Rementeri, A.3    Garaizar, J.4
  • 25
    • 0032800317 scopus 로고    scopus 로고
    • Microbiology spectrum and susceptibilities of isolates: Part I. Postoperative endophthalmitis
    • Kunimoto DY, Das TP, Savitri S, et al. Microbiology spectrum and susceptibilities of isolates: Part I. Postoperative endophthalmitis. Am J Ophthalmol. 1999;128:240-242.
    • (1999) Am J Ophthalmol , vol.128 , pp. 240-242
    • Kunimoto, D.Y.1    Das, T.P.2    Savitri, S.3
  • 26
    • 0032800158 scopus 로고    scopus 로고
    • Molecular characterization and antibiotic susceptibilities of ocular isolates of Staphylococcus epidermidis
    • Sechi LA, Pinna A, Pusceddu C, Fadda G, Carta F. Molecular characterization and antibiotic susceptibilities of ocular isolates of Staphylococcus epidermidis. J Clin Microbiol. 1999;37:3031-3033.
    • (1999) J Clin Microbiol , vol.37 , pp. 3031-3033
    • Sechi, L.A.1    Pinna, A.2    Pusceddu, C.3    Fadda, G.4    Carta, F.5
  • 27
    • 0141848322 scopus 로고    scopus 로고
    • Antibiotic resistance patterns of ocular bacterial flora a prospective study of patients undergoing anterior segment surgery
    • Ta N, Chang RT, Singh K, et al. Antibiotic resistance patterns of ocular bacterial flora a prospective study of patients undergoing anterior segment surgery, Ophthalmology. 2003;110:1946-1951.
    • (2003) Ophthalmology , vol.110 , pp. 1946-1951
    • Ta, N.1    Chang, R.T.2    Singh, K.3
  • 28
    • 10844278890 scopus 로고    scopus 로고
    • Detection of virulence-associated genes not useful for discriminating between invasive and commensal Staphylococcus epidermidis strains from a bone marrow transplant unit
    • Rohde H, Kalitzky M, Kroger N, et al. Detection of virulence-associated genes not useful for discriminating between invasive and commensal Staphylococcus epidermidis strains from a bone marrow transplant unit. J Clin Microbiol. 2004;42:5614-5619.
    • (2004) J Clin Microbiol , vol.42 , pp. 5614-5619
    • Rohde, H.1    Kalitzky, M.2    Kroger, N.3
  • 29
    • 24744452190 scopus 로고    scopus 로고
    • Clonal analysis of Staphylococcus epidermidis isolates carrying or lacking biofilm-mediating genes by multilocus sequence typing
    • Kozitskaya S, Olson ME, Fey PD, Witte W, Ohlsen K. Clonal analysis of Staphylococcus epidermidis isolates carrying or lacking biofilm-mediating genes by multilocus sequence typing. J Clin Microbiol. 2005;43:4751-4757.
    • (2005) J Clin Microbiol , vol.43 , pp. 4751-4757
    • Kozitskaya, S.1    Olson, M.E.2    Fey, P.D.3    Witte, W.4    Ohlsen, K.5
  • 30
    • 0036893408 scopus 로고    scopus 로고
    • Analysis of Ebh, a 1.1-megadalton cell wall-associated fibronectin-binding protein of Staphylococcus aureus
    • Clarke SR, Harris LG, Richards RG, Foster SJ. Analysis of Ebh, a 1.1-megadalton cell wall-associated fibronectin-binding protein of Staphylococcus aureus. Infect Immun. 2002;70:6680-6687.
    • (2002) Infect Immun , vol.70 , pp. 6680-6687
    • Clarke, S.R.1    Harris, L.G.2    Richards, R.G.3    Foster, S.J.4
  • 31
    • 1242340486 scopus 로고    scopus 로고
    • CTP:glycerol 3-phosphate cytidylyltransferase (TarD) from Staphylococcus aureus catalyzes the cytidylyl transfer via an ordered Bi-Bi reaction mechanism with micromolar K(m) values
    • Badurina DS, Zolli-Juran M, Brown ED. CTP:glycerol 3-phosphate cytidylyltransferase (TarD) from Staphylococcus aureus catalyzes the cytidylyl transfer via an ordered Bi-Bi reaction mechanism with micromolar K(m) values. Biochim Biophys Acta. 2003;1646:196-206.
    • (2003) Biochim Biophys Acta , vol.1646 , pp. 196-206
    • Badurina, D.S.1    Zolli-Juran, M.2    Brown, E.D.3
  • 32
    • 0028841913 scopus 로고
    • Staphylococcus aureus penicillin-binding protein 4 and intrinsic beta-lactam resistance
    • Henze UU, Berger-Bachi B. Staphylococcus aureus penicillin-binding protein 4 and intrinsic beta-lactam resistance. Antimicrob Agents Chemother. 1995;39:2415-2422.
    • (1995) Antimicrob Agents Chemother , vol.39 , pp. 2415-2422
    • Henze, U.U.1    Berger-Bachi, B.2
  • 33
    • 0034749923 scopus 로고    scopus 로고
    • Precise deletion of tagD and controlled depletion of its product, glycerol 3-phosphate cytidylyltransferase, leads to irregular morphology and lysis of Bacillus subtilis grown at physiological temperature
    • Bhavsar AP, Beveridge TJ, Brown ED. Precise deletion of tagD and controlled depletion of its product, glycerol 3-phosphate cytidylyltransferase, leads to irregular morphology and lysis of Bacillus subtilis grown at physiological temperature. J Bacteriol. 2001;183: 6688-6693.
    • (2001) J Bacteriol , vol.183 , pp. 6688-6693
    • Bhavsar, A.P.1    Beveridge, T.J.2    Brown, E.D.3
  • 34
    • 0141703399 scopus 로고    scopus 로고
    • Effect of enzyme I of the bacterial phosphoenolpyruvate: Sugar phosphotransferase system (PTS) on virulence in a murine model
    • Kok M, Bron G, Erni B, Mukhija S. Effect of enzyme I of the bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) on virulence in a murine model. Microbiology. 2003;149: 2645-2652.
    • (2003) Microbiology , vol.149 , pp. 2645-2652
    • Kok, M.1    Bron, G.2    Erni, B.3    Mukhija, S.4
  • 35
    • 0026756582 scopus 로고
    • Purification and characterization of elastase from Staphylococcus epidermidis
    • Sloot N, Thomas M, Marre R, Gatermann S. Purification and characterization of elastase from Staphylococcus epidermidis. J Med Microbiol. 1992;37:201-205.
    • (1992) J Med Microbiol , vol.37 , pp. 201-205
    • Sloot, N.1    Thomas, M.2    Marre, R.3    Gatermann, S.4


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