-
1
-
-
0042838381
-
Comparing the continuous representation of time series expression profiles to identify differentially expressed genes
-
Bar-Joseph,Z et al. (2003) Comparing the continuous representation of time series expression profiles to identify differentially expressed genes. PNAS, 100, 10146-10151.
-
(2003)
PNAS
, vol.100
, pp. 10146-10151
-
-
Bar-Joseph, Z.1
-
2
-
-
0000235653
-
Some theorems on quadratic-forms applied in the study of analysis of variance problems: Effect of inequality of variance in one-way classification
-
Box,G.E.P. (1954) Some theorems on quadratic-forms applied in the study of analysis of variance problems: Effect of inequality of variance in one-way classification. Ann. Math. Stat., 25, 290-302.
-
(1954)
Ann. Math. Stat
, vol.25
, pp. 290-302
-
-
Box, G.E.P.1
-
3
-
-
0032561246
-
The transcriptional program of sporulation in budding yeast
-
Chu,S. et al. (1998) The transcriptional program of sporulation in budding yeast. Science, 282, 699-705.
-
(1998)
Science
, vol.282
, pp. 699-705
-
-
Chu, S.1
-
4
-
-
24644503098
-
Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research
-
Conesa,A. et al. (2005) Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics, 21, 3674-3676.
-
(2005)
Bioinformatics
, vol.21
, pp. 3674-3676
-
-
Conesa, A.1
-
5
-
-
33646147811
-
maSigPro: A method to identify significantly differential expression profiles in time-course microarray experiments
-
Conesa,A. et al. (2006) maSigPro: A method to identify significantly differential expression profiles in time-course microarray experiments. Bioinformatics, 22, 1096-1102.
-
(2006)
Bioinformatics
, vol.22
, pp. 1096-1102
-
-
Conesa, A.1
-
6
-
-
33646383088
-
Dimension reduction for classification with gene expression microarray data
-
Article
-
Dai,J.J. et al. (2006) Dimension reduction for classification with gene expression microarray data. Stat. Appl. Genet. Mol. Biol., 5, Article 6.
-
(2006)
Stat. Appl. Genet. Mol. Biol
, vol.5
, pp. 6
-
-
Dai, J.J.1
-
7
-
-
0001138328
-
A k-means clustering algorithm
-
Hartigan,J.A. and Wong,M.A. (1979) A k-means clustering algorithm. Appl. Stat., 28, 100-108.
-
(1979)
Appl. Stat
, vol.28
, pp. 100-108
-
-
Hartigan, J.A.1
Wong, M.A.2
-
8
-
-
0037333902
-
Toxicogenomics of bromobenzene hepatotoxicity: A combined transcriptomics and proteomics approach
-
Heijne,W.H.M. et al. (2003) Toxicogenomics of bromobenzene hepatotoxicity: A combined transcriptomics and proteomics approach. Biochem. Pharmacol., 65, 857-875.
-
(2003)
Biochem. Pharmacol
, vol.65
, pp. 857-875
-
-
Heijne, W.H.M.1
-
9
-
-
0035108235
-
A hierarchical unsupervised growing neural network for clustering gene expression patterns
-
Herrero,J. et al. (2001). A hierarchical unsupervised growing neural network for clustering gene expression patterns. Bioinformatics, 17, 126-136.
-
(2001)
Bioinformatics
, vol.17
, pp. 126-136
-
-
Herrero, J.1
-
10
-
-
0033518877
-
Statistical analysis of array expresion data as applied to the problem of tamoxifen resistance
-
Hilsenbeck,S.G. et al. (1999) Statistical analysis of array expresion data as applied to the problem of tamoxifen resistance. J. Natl Cancer I., 91, 453-459.
-
(1999)
J. Natl Cancer I
, vol.91
, pp. 453-459
-
-
Hilsenbeck, S.G.1
-
11
-
-
32444450572
-
ASCA: Analysis of multivariate data obtained from an experimental design
-
Jansen,J.J. et al. (2005) ASCA: Analysis of multivariate data obtained from an experimental design. J. Chemometr., 19, 469-481.
-
(2005)
J. Chemometr
, vol.19
, pp. 469-481
-
-
Jansen, J.J.1
-
12
-
-
85060670248
-
Permutation-validated principal components analysis of microarray data
-
Landgrebe,J. et al. (2002) Permutation-validated principal components analysis of microarray data. Genome Biol., 3, 19.1-19.11.
-
(2002)
Genome Biol
, vol.3
-
-
Landgrebe, J.1
-
13
-
-
0035014159
-
Analysis of temporal gene expression profiles: Clustering by simulated annealing and determining the optimal number of clusters
-
Lukashin,A.V. and Fuchs,R. (2001) Analysis of temporal gene expression profiles: Clustering by simulated annealing and determining the optimal number of clusters. Bioinformatics, 17, 405-414.
-
(2001)
Bioinformatics
, vol.17
, pp. 405-414
-
-
Lukashin, A.V.1
Fuchs, R.2
-
15
-
-
0036166439
-
Tumor classification by partial least squares using microarray gene expression data
-
Nguyen,D. and Rocke,D. (2002) Tumor classification by partial least squares using microarray gene expression data. Bioinformatics, 18, 39-50.
-
(2002)
Bioinformatics
, vol.18
, pp. 39-50
-
-
Nguyen, D.1
Rocke, D.2
-
16
-
-
0035375137
-
Computational analysis of microarray data
-
Quackenbush,J. (2001) Computational analysis of microarray data. Nat. Rev. Genet., 2, 418-427.
-
(2001)
Nat. Rev. Genet
, vol.2
, pp. 418-427
-
-
Quackenbush, J.1
-
17
-
-
0000437861
-
Principal components analysis to summarize microarray experiments: Application to sporulation time series
-
Raychaudhuri,S. et al. (2000) Principal components analysis to summarize microarray experiments: Application to sporulation time series. Pac. Symp. Biocomput., 5, 452-463.
-
(2000)
Pac. Symp. Biocomput
, vol.5
, pp. 452-463
-
-
Raychaudhuri, S.1
-
18
-
-
33745967088
-
Mining gene expression data by interpreting principal components
-
Roden,J.C. et al. (2006) Mining gene expression data by interpreting principal components. BMC Bioinformatics, 7, 194.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 194
-
-
Roden, J.C.1
-
19
-
-
21444443325
-
ANOVA-Simultaneous component-analysis (ASCA): A new tool for analyzing designed metabolomics data
-
Smilde,A.K. et al. (2005) ANOVA-Simultaneous component-analysis (ASCA): A new tool for analyzing designed metabolomics data. Bioinformatics, 21, 3043-3048.
-
(2005)
Bioinformatics
, vol.21
, pp. 3043-3048
-
-
Smilde, A.K.1
-
20
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
-
Spellman,P.T. et al. (1998) Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol. Biol. Cell, 9, 3273-3297.
-
(1998)
Mol. Biol. Cell
, vol.9
, pp. 3273-3297
-
-
Spellman, P.T.1
-
21
-
-
24644519314
-
Significance analysis of time course microarray experiments
-
Storey,J.D. et al. (2005) Significance analysis of time course microarray experiments. PNAS, 102, 12837-12842.
-
(2005)
PNAS
, vol.102
, pp. 12837-12842
-
-
Storey, J.D.1
-
22
-
-
19144366911
-
A multivariate empirical Bayes statistic for replicated microarray time course data
-
Technical report 667. Department of Statistics, University of California, Berkeley
-
Tai,Y.C. and Speed,T.P. (2004) A multivariate empirical Bayes statistic for replicated microarray time course data. Technical report 667. Department of Statistics, University of California, Berkeley.
-
(2004)
-
-
Tai, Y.C.1
Speed, T.P.2
-
23
-
-
33646076705
-
Effect of the difference in vehicles on gene expression in the rat liver-analysis of the control data in the Toxicogenomics Project Database
-
Takashima,K. et al. (2006) Effect of the difference in vehicles on gene expression in the rat liver-analysis of the control data in the Toxicogenomics Project Database. Life Sci., 78, 2787-2796.
-
(2006)
Life Sci
, vol.78
, pp. 2787-2796
-
-
Takashima, K.1
-
24
-
-
0037795677
-
Four simultaneous component models of multivariate time series from more than one subject to model intraindividual and interindividual differences
-
Timmerman,M.E. and Kiers,H.A.L. (2003) Four simultaneous component models of multivariate time series from more than one subject to model intraindividual and interindividual differences. Psychometrika, 86, 105-122.
-
(2003)
Psychometrika
, vol.86
, pp. 105-122
-
-
Timmerman, M.E.1
Kiers, H.A.L.2
-
25
-
-
0034800371
-
Principal component analysis for clustering gene expresión data
-
Yeung,K.Y. and Ruzzo,W.L. (2001) Principal component analysis for clustering gene expresión data. Bioinformatics, 17, 763-774.
-
(2001)
Bioinformatics
, vol.17
, pp. 763-774
-
-
Yeung, K.Y.1
Ruzzo, W.L.2
|