Dissociation of halted T7 RNA polymerase elongation complexes proceeds via a forward-translocation mechanism

Proceedings of the National Academy of Sciences of the United States of America

Volumn 104, Issue 25, 2007, Pages 10352-10357

  Zhou, Yi ^a,b   Navaroli, Deanna M ^a,c   Enuameh, Metewo Selase ^a   Martin, Craig T ^a  

^a UNIVERSITY OF MASSACHUSETTS   (United States)

^b Altus Pharmaceuticals Inc   (United States)

^c UNIVERSITY OF MASSACHUSETTS MEDICAL SCHOOL   (United States)

Author keywords

Hybrid; Hypertranslocation; Stability; Topological lock

Indexed keywords

COMPLEMENTARY RNA; DNA; OLIGONUCLEOTIDE; RNA POLYMERASE;

ARTICLE; BACTERIOPHAGE T7; COMPLEX FORMATION; DISSOCIATION; ENZYME ACTIVE SITE; ENZYME STABILITY; NONHUMAN; PRIORITY JOURNAL; SIGNAL TRANSDUCTION; TRANSCRIPTION TERMINATION;

BASE SEQUENCE; BIOLOGICAL TRANSPORT; DNA, VIRAL; DNA-DIRECTED RNA POLYMERASES; ENZYME STABILITY; ESCHERICHIA COLI; KINETICS; MODELS, GENETIC; MUTATION; PROMOTER REGIONS (GENETICS); TEMPLATES, GENETIC; TRANSCRIPTION, GENETIC; VIRAL PROTEINS;

EID: 34547501055     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0606306104     Document Type: Article

References (29)

1. Herbert KM, La Porta A, Wong BJ, Mooney RA, Neuman KC, Landick R, Block SM (2006) Cell 125:1083-1094.
2. Neuman KC, Abbondanzieri EA, Landick R, Gelles J, Block SM (2003) Cell 115:437-447.
3. Davenport RJ, Wuite GJ, Landick R, Bustamante C (2000) Science 287:2497-2500.
4. Adelman K, La Porta A, Santangelo TJ, Lis JT, Roberts JW, Wang MD (2002) Proc Natl Acad Sci USA 99:13538-13543.
5. Winkler ME, Yanofsky C (1981) Biochemistry 20:3738-3744.
6. von Hippel PH, Yager TD (1992) Science 255:809-812.
7. Mooney RA, Artsimovitch I, Landick R (1998) J Bacteriol 180:3265-3275.
8. Uptain SM, Kane CM, Chamberlin MJ (1997) Annu Rev Biochem 66:117-172.
9. Santangelo TJ, Roberts JW (2004) Mol Cell 14:117-126.
10. Park JS, Roberts JW (2006) Proc Natl Acad Sci USA 103:4870-4875.
11. Yarnell WS, Roberts JW (1999) Science 284:611-615.
12. Huang J, Sousa R (2000) J Mol Biol 303:347-358.
13. Kuzmine I, Martin CT (2001) J Mol Biol 305:559-566.
14. Patel SS, Bandwar RP (2003) Methods Enzymol 370:668-686.
15. Zhou Y, Martin CT (2006) J Biol Chem 281:24441-24448.
16. Rong M, Durbin RK, McAllister WT (1998) J Biol Chem 273:10253-10260.
17. Ryder AM, Roberts JW (2003) J Mol Biol 334:205-213.
18. Artsimovitch I, Landick R (1998) Genes Dev 12:3110-3122.
19. Tahirov TH, Temiakov D, Anikin M, Patlan V, McAllister WT, Vassylyev DG, Yokoyama S (2002) Nature 420:43-50.
20. Yin YW, Steitz TA (2002) Science 298:1387-1395.
21. Liu C, Martin CT (2001) J Mol Biol 308:465-475.
22. Mentesana PE, Chin-Bow ST, Sousa R, McAllister WT (2000) J Mol Biol 302:1049-1062.
23. SantaLucia J, Jr (1998) Proc Natl Acad Sci USA 95:1460-1465.
24. SantaLucia J, Jr, Hicks D (2004) Annu Rev Biophys Biomol Struct 33:415-440.
25. Lee DN, Phung L, Stewart J, Landick R (1990) J Biol Chem 265:15145-15153.
26. Bommarito S, Peyret N, SantaLucia J, Jr (2000) Nucleic Acids Res 28:1929-1934.
27. Tadigotla VR, O Maoileidigh D, Sengupta AM, Epshtein V, Ebright RH, Nudler E, Ruckenstein AE (2006) Proc Natl Acad Sci USA 103:4439-4444.
28. Schick C, Martin CT (1993) Biochemistry 32:4275-4280.
29. Diaz GA, Rong M, McAllister WT, Durbin RK (1996) Biochemistry 35:10837-10843.