The effect of family structure on the likelihood for kin-biased distribution: An empirical study of brown trout populations

Journal of Fish Biology

Volumn 71, Issue SUPPL. A, 2007, Pages 98-110

  Carlsson, J ^a  

^a VIRGINIA INSTITUTE OF MARINE SCIENCE   (United States)

Author keywords

Family structure; Kin biased behaviours; Microsatellites; Ne; Relatedness; Salmo trutta

Indexed keywords

SALMO TRUTTA; SALMONIDAE;

EID: 34547109352     PISSN: 00221112     EISSN: 10958649     Source Type: Journal    
DOI: 10.1111/j.1095-8649.2007.01546.x     Document Type: Article

References (41)

1. Allendorf, F. W. Phelps, S. R 1981). Use of allelic frequencies to describe population structure. Canadian Journal of Fisheries and Aquatic Sciences 38, 1507 1514.
2. Beerli, P. Felsenstein, J 2001). Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proceedings of the National Academy of Sciences of the United States of America 98, 4563 4568.
3. Blouin, M. S 2003). DNA-based methods for pedigree reconstruction and kinship analysis in natural populations. Trends in Ecology & Evolution 18, 503 511.
4. Brown, G. E. Brown, J. A 1996). Kin discrimination in salmonids. Reviews in Fish Biology and Fisheries 6, 201 219.
5. Cairney, M., Taggart, J. B. Høyheim, B 2000). Characterization of microsatellite and minisatellite locus in Atlantic salmon (Salmo salar L.) and cross-species amplification in other salmonids. Molecular Ecology 9, 2175 2187.
6. Carlsson, J. Carlsson, J. E. L 2002). Micro-scale distribution of brown trout: an opportunity for kin-selection? Ecology of Freshwater Fish 11, 234 239.
7. Carlsson, J. Nilsson, J 2001). Effects of geomorphological structures on genetic differentiation among brown trout populations in a northern Boreal river drainage. Transactions of the American Fisheries Society 130, 36 45.
8. Carlsson, J., Olsén, H. K., Nilsson, J., Øverli Ø Stabell, O. B 1999). Microsatellites reveal fine-scale genetic structure in stream-living brown trout. Journal of Fish Biology 55, 1290 1303.
9. Carlsson, J., Carlsson, J. E. L., Olsén, K. H., Hansen, M. M., Eriksson, T. Nilsson, J 2004). Kin-biased distribution in brown trout: an effect of redd location or kin recognition? Heredity 94, 53 61.
10. Elliott, J. M 1994). Quantitative Ecology and The Brown Trout. Oxford : Oxford University Press.
11. Estoup, A., Presa, P., Krieg, F., Vaiman, D. Guyomard, R 1993). (CT)n and (GT)n microsatellites: a new class of genetic markers for Salmo trutta L. (brown trout). Heredity 71, 488 496.
12. Estoup, A., Rousset, F., Michalakis, Y., Cornuet, J.-M., Adriamanga, M. Guyomard, R 1998). Comparative analysis of microsatellite and allozyme markers: a case study investigating microgeographic differentiation in brown trout (Salmo trutta). Molecular Ecology 7, 339 353.
13. Fontaine, P.-M. Dodson, J. J 1999). An analysis of the distribution of juvenile Atlantic salmon (Salmo salar) in nature as a function of relatedness using microsatellites. Molecular Ecology 8, 189 198.
14. Fraser, D. J., Duchesne, P. Bernatchez, L 2005). Migratory charr schools exhibit population and kin associations beyond juvenile stages. Molecular Ecology 14, 3133 3146.
15. Griffiths, S. W 2003). Learned recognition of conspecifics by fishes. Fish and Fisheries 4, 256 268.
16. Grosberg, R. K. Quinn, J. F 1986). The genetic control and consequences of kin recognition by the larvae of a colonial invertebrate. Nature 322, 456 459.
17. Guo, S. W. Thompson, E. A 1992). Performing the exact test for Hardy-Weinberg proportion for multiple alleles. Biometrics 48, 361 372.
18. Hamilton, W. D 1963). The evolution of altruistic behavior. American Naturalist 97, 354 356.
19. Hamilton, W. D 1964). The genetical evolution of social behaviour I & II. Journal of Theoretical Biology 7, 1 16.
20. Hansen, M. M. Jensen, L. F 2005). Sibship within samples of brown trout (Salmo trutta) and implications for supportive breeding. Conservation Genetics 6, 297 305.
21. Hansen, M. M., Nielsen, E. E. Mensberg, K.-L. D. (1997). The problem of sampling families rather than populations: relatedness among individuals in samples of juvenile brown trout (Salmo trutta L.). Molecular Ecology 6, 469 474.
22. Hepper, P 1991). Kin Recognition. Cambridge : Cambridge University Press.
23. Holmes, W. G. Sherman, P. W 1983). Kin recognition in animals. American Scientist 71, 46 55.
24. Kingman, J. F. C 1982a). On the genealogy of large populations. In Essays in Statistical Science (Gani, J. Hannan, E. J. pp. 27 43. London : Applied Probability Trust.
25. Kingman, J. F. C 1982b). The coalescent. Stochastic Processes and their Applications 13, 235 248.
26. McCracken, G. G 1984). Communal nursing in Mexican free-tailed bat maternity colonies. Science 233, 1090 1091.
27. Mjølnerød, I. B., Refseth, U. H. Hindar, K 1999). Spatial association of genetically similar Atlantic salmon juveniles and sex bias in spatial patterns in a river. Journal of Fish Biology 55, 1 8.
28. Olsén, K. H 1999). Present knowledge of kin discrimination in salmonids. Genetica 104, 295 299.
29. O'Reilly, P., Hamilton, T. L. C., McConnel, S. K. Wright, J. M 1996). Rapid analysis of genetic variation in Atlantic salmon (Salmo salar) by PCR multiplexing of dinucleotide and tetranucleotide microsatellites. Canadian Journal of Fisheries and Aquatic Sciences 53, 2292 2298.
30. Packer, C., Gilbert, D., Pusey, A. O'Brien, S 1991). A molecular genetic analysis of kinship and cooperation in African lions. Nature 351, 562 565.
31. Palm, S., Laikre, L., Jorde, P.-E. Ryman, N 2003). Effective population size and temporal genetic change in stream resident brown trout (Salmo trutta, L Conservation Genetics 4, 249 264.
32. Rice, W. R 1989). Analyzing tables of statistical tests. Evolution 43, 223 225.
33. Schneider, S., Kueffer, J.-M., Roessli, D. Excoffier, L 1997). Arlequin ver. 1.1: A Software for Population Genetic Data Analysis. Switzerland : Genetics and Biometry Laboratory, University of Geneva.
34. Sherman, P. W., Reeve, H. K. Pfenning D. W 1997). Recognition systems. In Behavioural Ecology: An Evolutionary Approach, 4th edn (Krebs, J. R. Davies, N. B., eds pp. 69 96. Oxford : Blackwell Scientific.
35. Slettan, A., Olsaker. I. Lie, Ø 1995). Atlantic salmon, Salmo salar, microsatellites at the SSOSL25, SSOSL85, SSOSL311, SSOSL417 locus. Animal Genetics 26, 281 282.
36. Slettan, A., Olsaker, I. Lie, Ø 1996). Polymorphic Atlantic salmon, Salmo salar L., microsatellites at the SSOSL438, SSOSL439 and SSOSL444 locus. Animal Genetics 27, 57 58.
37. Waldman, B 1987). Mechanisms of kin recognition. Journal of Theoretical Biology 128, 159 185.
38. Waldman, B 1988). The ecology of kin recognition. Annual Review of Ecology and Systematics 13, 543 571.
39. Wang, J. L 2004). Sibship reconstruction from genetic data with typing errors. Genetics 166, 1963 1979.
40. Weber, J. L. Wong, C 1993). Mutation of human short tandem repeats. Human Molecular Genetics 2, 1123 1128.
41. Beerli, P 2002). MIGRATE: documentation and program, part of LAMARC. Version 1.5. Available at http://evolution.genetics.washington.edu/lamarc.html