SCOPUS 정보 검색 플랫폼

Volumn 8, Issue 5, 2007, Pages 567-573

Phosphorylation-induced conformational changes in short peptides probed by fluorescence resonance energy transfer in the 10 Å domain

(2) Sahoo, Harekrushna a Nau, Werner M a

a JACOBS UNIVERSITY BREMEN (Germany)

Author keywords

FRET; Kinases; Peptides; Phosphorylation; Time resolved spectroscopy

Indexed keywords

2,3 DIAZABICYCLO[2.2.2]OCT 2 ENE; ALKENE DERIVATIVE; ASPARAGINE; PEPTIDE DERIVATIVE; POLYPEPTIDE; TRYPTOPHAN; TRYPTOPHYLLYSYLARGINYLTHREONINELEUCYLARGINYLARGINYL ASPARAGINE; TRYPTOPHYLLYSYLARGINYLTHREONYLLEUCYLARGINYLARGINYL ASPARAGINE; UNCLASSIFIED DRUG; ARGININE; PEPTIDE; PHOSPHATE; SERINE; THREONINE; WATER;

ARTICLE; FLUORESCENCE RESONANCE ENERGY TRANSFER; HYDROGEN BOND; MOLECULAR PROBE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN CONFORMATION; PROTEIN DOMAIN; PROTEIN PHOSPHORYLATION; PROTEIN STRUCTURE; PROTEOMICS; STRUCTURE ANALYSIS; CHEMICAL MODEL; CHEMISTRY; METHODOLOGY; NORMAL DISTRIBUTION; PHOSPHORYLATION; PROTEIN TERTIARY STRUCTURE; SPECTROFLUOROMETRY; STATISTICAL MODEL; STEREOISOMERISM;

ARGININE; FLUORESCENCE RESONANCE ENERGY TRANSFER; MODELS, CHEMICAL; MODELS, STATISTICAL; NORMAL DISTRIBUTION; PEPTIDES; PHOSPHATES; PHOSPHORYLATION; PROTEIN CONFORMATION; PROTEIN STRUCTURE, TERTIARY; SERINE; SPECTROMETRY, FLUORESCENCE; STEREOISOMERISM; THREONINE; WATER;

EID: 34447629057 PISSN: 14394227 EISSN: 14397633 Source Type: Journal
DOI: 10.1002/cbic.200600466 Document Type: Article

Times cited : (25)

References (44)

1
- 0034614490
- T. Hunter, Cell 2000, 100, 113-127.
- (2000) Cell , vol.100 , pp. 113-127
- Hunter, T.¹

2
- 0027310848
- L. N. Johnson, D. Barford, Annu. Rev. Biophys. Biomol. Struct. 1993, 22, 199-232.
- (1993) Annu. Rev. Biophys. Biomol. Struct , vol.22 , pp. 199-232
- Johnson, L.N.¹ Barford, D.²

3
- 0034797512
- P. Cohen, Eur. J. Biochem. 2001, 268, 5001-5010.
- (2001) Eur. J. Biochem , vol.268 , pp. 5001-5010
- Cohen, P.¹

4
- 0032749078
- P. E. Wright, H. J. Dyson, J. Mol. Biol. 1999, 293, 321-331.
- (1999) J. Mol. Biol , vol.293 , pp. 321-331
- Wright, P.E.¹ Dyson, H.J.²

5
- 0035413607
- L. N. Johnson, R. J. Lewis, Chem. Rev. 2001, 101, 2209-2242.
- (2001) Chem. Rev , vol.101 , pp. 2209-2242
- Johnson, L.N.¹ Lewis, R.J.²

6
- 0037033036
- C. M. Stultz, A. D. Levin, E. R. Edelman, J. Biol. Chem. 2002, 277, 47 653-47 661.
- (2002) J. Biol. Chem , vol.277
- Stultz, C.M.¹ Levin, A.D.² Edelman, E.R.³

7
- 0034833014
- S. W. Vetter, E. Leclerc, Eur. J. Biochem. 2001, 268, 4292-4299.
- (2001) Eur. J. Biochem , vol.268 , pp. 4292-4299
- Vetter, S.W.¹ Leclerc, E.²

8
- 0035900569
- W.-J. Dong, J. Xing, J. M. Robinson, H. C. Cheung, J. Mol. Biol. 2001, 314, 51-61.
- (2001) J. Mol. Biol , vol.314 , pp. 51-61
- Dong, W.-J.¹ Xing, J.² Robinson, J.M.³ Cheung, H.C.⁴

9
- 0035936550
- H. Watrob, W. Liu, Y. Chen, S. G. Bartlett, L. Jen-Jacobson, M. D. Barkley, Biochemistry 2001, 40, 683-692.
- (2001) Biochemistry , vol.40 , pp. 683-692
- Watrob, H.¹ Liu, W.² Chen, Y.³ Bartlett, S.G.⁴ Jen-Jacobson, L.⁵ Barkley, M.D.⁶

10
- 0034859534
- A. Neininger, H. Thielemann, M. Gaestel, EMBO J. 2001, 2, 703-708.
- (2001) EMBO J , vol.2 , pp. 703-708
- Neininger, A.¹ Thielemann, H.² Gaestel, M.³

11
- 0035902595
- M. A. Trakselis, S. C. Alley, E. Abel-Santos, S. J. Benkovic, Proc. Natl. Acad. Sci. USA 2001, 98, 8368-8375.
- (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 8368-8375
- Trakselis, M.A.¹ Alley, S.C.² Abel-Santos, E.³ Benkovic, S.J.⁴

12
- 0025202408
- P. J. Roach, FASEB J. 1990, 4, 2961-2968.
- (1990) FASEB J , vol.4 , pp. 2961-2968
- Roach, P.J.¹

13
- 0034601916
- G. F. Audette, R. Engelmann, W. Hengstenberg, J. Deutscher, K. Hayakawa, J. W. Quail, L. T. J. Delbaere, J. Mol. Biol. 2000, 303, 545-553.
- (2000) J. Mol. Biol , vol.303 , pp. 545-553
- Audette, G.F.¹ Engelmann, R.² Hengstenberg, W.³ Deutscher, J.⁴ Hayakawa, K.⁵ Quail, J.W.⁶ Delbaere, L.T.J.⁷

14
- 27744545622
- A. E. Johnson, Traffic 2005, 6, 1078-1092.
- (2005) Traffic , vol.6 , pp. 1078-1092
- Johnson, A.E.¹

15
- 0032906903
- A. Tholey, A. Lindemann, V. Kinzel, J. Reed, Biophys. J. 1999, 76, 76-87.
- (1999) Biophys. J , vol.76 , pp. 76-87
- Tholey, A.¹ Lindemann, A.² Kinzel, V.³ Reed, J.⁴

16
- 15744387842
- S. E. Wong, K. Bernacki, M. Jacobson, J. Phys. Chem. B 2005, 109, 5249-5258.
- (2005) J. Phys. Chem. B , vol.109 , pp. 5249-5258
- Wong, S.E.¹ Bernacki, K.² Jacobson, M.³

17
- 0035913754
- T. Y. Shen, C. F. Wong, J. A. McCammon, J. Am. Chem. Soc. 2001, 123, 9107-9111.
- (2001) J. Am. Chem. Soc , vol.123 , pp. 9107-9111
- Shen, T.Y.¹ Wong, C.F.² McCammon, J.A.³

18
- 0036669824
- T. Heyduk, Curr. Opin. Biotechnol. 2002, 13, 292-296.
- (2002) Curr. Opin. Biotechnol , vol.13 , pp. 292-296
- Heyduk, T.¹

19
- 33745667285
- H. Sahoo, D. Roccatano, M. Zacharias, W. M. Nau, J. Am. Chem. Soc. 2006, 128, 8118-8119.
- (2006) J. Am. Chem. Soc , vol.128 , pp. 8118-8119
- Sahoo, H.¹ Roccatano, D.² Zacharias, M.³ Nau, W.M.⁴

20
- 0026355413
- R. B. Pearson, B. E. Kemp, Methods Enzymol. 1991, 200, 62-81.
- (1991) Methods Enzymol , vol.200 , pp. 62-81
- Pearson, R.B.¹ Kemp, B.E.²

21
- 0035413606
- J. A. Adams, Chem. Rev. 2001, 101, 2271-2290.
- (2001) Chem. Rev , vol.101 , pp. 2271-2290
- Adams, J.A.¹

22
- 0037196288
- R. R. Hudgins, F. Huang, G. Gramlich, W. M. Nau, J. Am. Chem. Soc. 2002, 124, 556-564.
- (2002) J. Am. Chem. Soc , vol.124 , pp. 556-564
- Hudgins, R.R.¹ Huang, F.² Gramlich, G.³ Nau, W.M.⁴

23
- 33646798924
- F. Huang, W. M. Nau, Angew. Chem. 2003, 115, 2371-2374;
- (2003) Angew. Chem , vol.115 , pp. 2371-2374
- Huang, F.¹ Nau, W.M.²

24
- 0038319135
- Angew. Chem. Int. Ed. 2003, 42, 2269-2272.
- (2003) Chem. Int. Ed , vol.42 , pp. 2269-2272
- Angew¹

25
- 11444265452
- F. Huang, R. R. Hudgins, W. M. Nau, J. Am. Chem. Soc. 2004, 126, 16 665-16 675.
- (2004) J. Am. Chem. Soc , vol.126
- Huang, F.¹ Hudgins, R.R.² Nau, W.M.³

26
- 28044443678
- H. Bakirci, A. L. Koner, W. M. Nau, J. Org. Chem. 2005, 70, 9960-9966.
- (2005) J. Org. Chem , vol.70 , pp. 9960-9966
- Bakirci, H.¹ Koner, A.L.² Nau, W.M.³

27
- 0025830305
- R. F. Chen, J. R. Knutson, H. Ziffer, D. Porter, Biochemistry 1991, 30, 5184-5195.
- (1991) Biochemistry , vol.30 , pp. 5184-5195
- Chen, R.F.¹ Knutson, J.R.² Ziffer, H.³ Porter, D.⁴

28
- 0004040064
- Kluwer, New York
- J. R. Lakowicz, Principles of Fluorescence Spectroscopy, Kluwer, New York, 1999.
- (1999) Principles of Fluorescence Spectroscopy
- Lakowicz, J.R.¹

29
- 0014633510
- R. F. Steiner, E. P. Kirby, J. Phys. Chem. 1969, 73, 4130-4135.
- (1969) J. Phys. Chem , vol.73 , pp. 4130-4135
- Steiner, R.F.¹ Kirby, E.P.²

30
- 0037067120
- I.-C. Yeh, G. Hummer, J. Am. Chem. Soc. 2002, 124, 6563-6568.
- (2002) J. Am. Chem. Soc , vol.124 , pp. 6563-6568
- Yeh, I.-C.¹ Hummer, G.²

31
- 10444232877
- D. Roccatano, W. M. Nau, M. Zacharias, J. Phys. Chem. B 2004, 108, 18 734-18 742.
- (2004) J. Phys. Chem. B , vol.108
- Roccatano, D.¹ Nau, W.M.² Zacharias, M.³

32
- 0025694526
- J. R. Lakowicz, W. Wiczk, I. Gryczynski, M. L. Johnson, SPIE 1990, 1204, 192-205.
- (1990) SPIE , vol.1204 , pp. 192-205
- Lakowicz, J.R.¹ Wiczk, W.² Gryczynski, I.³ Johnson, M.L.⁴

33
- 2442519939
- D. Klostermeier, D. P. Millar, Biopolymers 2002, 61, 159-179.
- (2002) Biopolymers , vol.61 , pp. 159-179
- Klostermeier, D.¹ Millar, D.P.²

34
- 34547526799
- Fang Huang, University of Cambridge, has pointed out that a more accurate version of Equation (3) should take into account differences in R 0 values for the different Trp lifetime components, which have been related to different rotamers (cf. ref, 26, Assuming that the differences of the two lifetime components for the reference peptides ref-I and ref-II (factor of 2-3) affect the fluorescence quantum yields to the same extent, variations in the R0 values (square-root-of-6 dependence) of 12-20% could result, and the R0 values determined in Table 2 would lie in between. Such a refined analysis (which cannot be rigorously implemented due to lack of experimental data for the individual R0 values of the proposed Trp rotamers) could lead to slight estimated <10, variations in the recovered absolute distances, but would not affect the relative trends
- 0 values of the proposed Trp rotamers) could lead to slight (estimated <10%) variations in the recovered absolute distances, but would not affect the relative trends.

35
- 34547504329
- Fittings according to the worm-like chain model afforded the same relative trends in terms of variations in distances and chain flexibility persistence length
- Fittings according to the worm-like chain model afforded the same relative trends in terms of variations in distances and chain flexibility (persistence length).

36
- 34547501851
- unpublished results
- H. Sahoo, W. M. Nau, 2007, unpublished results.
- (2007)
- Sahoo, H.¹ Nau, W.M.²

37
- 34547508083
- CD measurements performed for peptides I, pI, II, and pII did not provide evidence for a stable secondary structure either (H. Sahoo, W. M. Nau, Indian J. Radiat. Res. 2006, 3, 104-112).
- CD measurements performed for peptides I, pI, II, and pII did not provide evidence for a stable secondary structure either (H. Sahoo, W. M. Nau, Indian J. Radiat. Res. 2006, 3, 104-112).

38
- 0018093765
- M. Levitt, Biochemistry 1978, 17, 4277-4285.
- (1978) Biochemistry , vol.17 , pp. 4277-4285
- Levitt, M.¹

39
- 0034113648
- D. Pal, P. Chakrabarti, Acta Crystallogr. Sect. D Biol. Crystallogr. 2000, 56, 589-594.
- (2000) Acta Crystallogr. Sect. D Biol. Crystallogr , vol.56 , pp. 589-594
- Pal, D.¹ Chakrabarti, P.²

40
- 0029783651
- K. Lin, V. L. Rath, S. C. Dai, R. J. Fletterick, P. K. Hwang, Science 1996, 273, 1539-1541.
- (1996) Science , vol.273 , pp. 1539-1541
- Lin, K.¹ Rath, V.L.² Dai, S.C.³ Fletterick, R.J.⁴ Hwang, P.K.⁵

41
- 0026698924
- G. Waksman, D. Kominos, S. C. Robertson, N. Pant, D. Baltimore, R. B. Birge, D. Cowburn, H. Hanafusa, B. J. Mayer, M. Overduin, M. D. Resh, C. B. Rios, L. Silverman, J. Kuriyan, Nature 1992, 358, 646-653.
- (1992) Nature , vol.358 , pp. 646-653
- Waksman, G.¹ Kominos, D.² Robertson, S.C.³ Pant, N.⁴ Baltimore, D.⁵ Birge, R.B.⁶ Cowburn, D.⁷ Hanafusa, H.⁸ Mayer, B.J.⁹ Overduin, M.¹⁰ Resh, M.D.¹¹ Rios, C.B.¹² Silverman, L.¹³ Kuriyan, J.¹⁴

42
- 0018881742
- J. R. Knowles, Annu. Rev. Biochem. 1980, 49, 877-919.
- (1980) Annu. Rev. Biochem , vol.49 , pp. 877-919
- Knowles, J.R.¹

43
- 0017365503
- J. F. Riordan, K. D. McElvaney, C. L. Borders, Science 1977, 195, 884-886.
- (1977) Science , vol.195 , pp. 884-886
- Riordan, J.F.¹ McElvaney, K.D.² Borders, C.L.³

44
- 0022147096
- K. D. Collins, M. W. Washabaugh, Q. Rev. Biophys. 1985, 18, 323-422.
- K. D. Collins, M. W. Washabaugh, Q. Rev. Biophys. 1985, 18, 323-422.

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