Transport-theory-based stochastic image reconstruction of bioluminescent sources

Journal of the Optical Society of America A: Optics and Image Science, and Vision

Volumn 24, Issue 6, 2007, Pages 1601-1608

  Klose, Alexander D ^a  

^a Och Spine at New York Presbyterian Hospitals   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLUMINESCENCE; INVERSE PROBLEMS; LEAST SQUARES APPROXIMATIONS; LIGHT SCATTERING; LIGHT SOURCES; PROBLEM SOLVING; RANDOM PROCESSES; SAMPLING;

BIOLUMINESCENT BOUNDARY FLUX; BIOLUMINESCENT SOURCES; LIGHT-SCATTERING MEDIA; STOCHASTIC IMAGE RECONSTRUCTION;

IMAGE RECONSTRUCTION;

ARTICLE; IMAGE PROCESSING; LIGHT; LUMINESCENCE; METHODOLOGY; RADIATION SCATTERING; REGRESSION ANALYSIS; STATISTICS; THEORETICAL MODEL;

IMAGE PROCESSING, COMPUTER-ASSISTED; LEAST-SQUARES ANALYSIS; LIGHT; LUMINESCENCE; MODELS, THEORETICAL; SCATTERING, RADIATION; STOCHASTIC PROCESSES;

EID: 34447273616     PISSN: 10847529     EISSN: None     Source Type: Journal    
DOI: 10.1364/JOSAA.24.001601     Document Type: Article

References (37)

1. D. K. Welsh and S. A. Kay, "Bioluminescence imaging in living organisms," Curr. Opin. Biotechnol. 16, 73-78 (2005).
2. B. W. Rice, M. D. Cable, and M. B. Nelson, "In vivo imaging of light-emitting probes," J. Biomed. Opt. 6, 432-440 (2001).
3. T. Troy, D. Jekic-McMullen, L. Sambucetti, and B. Rice, "Quantitative comparison of the sensitivity of detection of fluorescent and bioluminescent reporters in animal models," Mol. Imaging 3, 9-23 (2004).
4. H. Zhao, T. C. Doyle, O. Coquoz, F. Kalish, B. W. Rice, and C. H. Contag, "Emission spectra of bioluminescent reporters and interaction with mammalian tissue determine the sensitivity of detection in vivo," J. Biomed. Opt. 10, 041210-01 (2005).
5. V. V. Tuchin, Handbook of Optical Biomedical Diagnostics (SPIE, 2002).
6. A. J. Welch and M. J. C. van Gemert, Optical-Thermal Response of Laser-Irradiated Tissue (Plenum, 1995).
7. W. F. Cheong, S. A. Prahl, and A. J. Welch, "A review of the optical properties of biological tissue," IEEE J. Quantum Electron. 26, 2166-2185 (1990).
8. A. M. Hielscher, R. E. Alcouffe, and R. L. Barbour, "Comparison of finite-difference transport and diffusion calculations for photon migration in homogeneous and heterogeneous tissues," Phys. Med. Biol. 43, 1285-1302 (1998).
9. E. D. Aydin, C. R. E. de Oliveira, and A. J. H. Goddard, "A comparison between transport and diffusion calculations using a finite element-spherical harmonics radiation transport method," Med. Phys. 29, 2013-2023 (2002).
10. A. D. Klose and E. W. Larsen, "Light transport in biological tissue based on the simplified spherical harmonics equations," J. Comput. Phys. 220, 441-470 (2006).
11. G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, "Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study," Phys. Med. Biol. 50, 4225-4241 (2005).
12. A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).
13. H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, and K. D. Paulsen, "Spectrally resolved bioluminescence optical tomography," Opt. Lett. 31, 365-367 (2006).
14. W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).
15. G. Wang, Y. Li, and M. Jiang, "Uniqueness theorems in bioluminescence tomography," Med. Phys. 31, 2289-2299 (2004).
16. W. Han, W. Cong, and G. Wang, "Mathematical theory and numerical analysis of bioluminescence tomography," Inverse Probl. 22, 1659-1675 (2006).
17. E. W. Larsen, "The inverse source problem in radiative transfer, " J. Quant. Spectrosc. Radiat. Transf. 15, 1-5 (1975).
18. C. E. Siewert, "An inverse source problem in radiative transfer," J. Quant. Spectrosc. Radiat. Transf. 50, 603-609 (1993).
19. C. E. Siewert, "A radiative-transfer inverse-source problem for a sphere," J. Quant. Spectrosc. Radiat. Transf. 52, 157-160 (1994).
20. B. J. Hoenders, "Existence of invisible nonscattering objects and nonradiating sources," J. Opt. Soc. Am. A 14, 262-266 (1997).
21. G. Bal and A. Tamasan, "Inverse source problem in transport equations" (manuscript in preparation).
22. S. G. Nash, Linear and Nonlinear Programming (McGraw-Hill, 1996).
23. J. Nocedal and S. J. Wright, Numerical Optimization (Springer, 1999).
24. H.-G. Beyer and H.-P. Schwefel, "Evolution strategies," Nat. Comput. 1, 3-52 (2002).
25. N. Metropolis, A. Rosenbluth, M. Rosenbluth, A. Teller, and E. Teller, "Equation of state calculations by fast computing machines," J. Chem. Phys. 21, 1087-1092 (1953).
26. S. Kirkpatrick, C. D. Gelatt, Jr., and M. P. Vecchi, "Optimization by simulated annealing," Science 220, 671-680 (1983).
27. A. D. Klose, V. Ntziachristos, and A.H. Hielscher, "The inverse source problem based on the radiative transfer equation in optical molecular imaging," J. Comput. Phys. 202, 323-345 (2005).
28. H.-P, Schwefel, Evolution and Optimum Seeking (Wiley, 1995).
29. A. H. Hielscher, A. D. Klose, and J. Beuthan, "Evolution strategies for optical tomographic characterization of homogeneous media," Opt. Express 7, 507-518 (2000).
30. F. P. Bolin, L. E. Preuss, R. C. Taylor, and R. J. Ference, "Refractive index of some mammalian tissues using a fiber optic cladding method," Appl. Opt. 28, 2297-2303 (1989).
31. G. J. Tearney, M. E. Brezinski, J. F. Southern, B. E. Bouma, M. R. Hee, and J. G. Fujimotot, "Determination of the refractive-index of highly scattering human tissue by optical coherence tomography," Opt. Lett. 20, 2258-2260 (1995).
32. H. Li and S. Xie, "Measurement method of the refractive index of biotissue by internal reflection," Appl. Opt. 35, 1793-1795 (1996).
33. J. J. J. Dirckx, L. C. Kuypers, and W. F. Decraemer, "Refractive index of tissue measured," J. Biomed. Opt. 10, 044014 (2005).
34. A. D. Kim and A. Ishimaru, "Optical diffusion of continuous-wave, pulsed, and density waves in scattering media and comparisons with radiative transfer," Appl. Opt. 37, 5313-5319 (1998).
35. B. Chen, K. Stamnes, and J. J. Stamnes, "Validity of the diffusion approximation in bio-optical imaging," Appl. Opt. 40, 6356-6366 (2001).
36. R. Elaloufi, R. Carminati, and J.-J. Greffet, "Time-dependent transport through scattering media: from radiative transfer to diffusion," J. Opt. Soc. Am. A 4, S103-S108 (2002).
37. A. D. Klose, V. Ntziachristos, and A. H. Hielscher, "In vivo fluorescence molecular imaging with a radiative transfer model," Mol. Imaging 3, 230 (2004).