Genetic diversity among Botryosphaeria isolates and their correlation with cell wall-lytic enzyme production

Brazilian Journal of Microbiology

Volumn 38, Issue 2, 2007, Pages 259-264

  Saldanha, Roze L ^a   Garcia, José E ^a   Dekker, Robert F H ^a   Vilas Boas, Laurival A ^a,b   Barbosa, Aneli M ^a  

^a STATE UNIVERSITY OF LONDRINA   (Brazil)

^b FEDERAL UNIVERSITY OF BAHIA   (Brazil)

Author keywords

Botryosphaeria isolates; ITS and RAPD; Laccase; Pectinase; 1,3 Glucanase

Indexed keywords

BOTRYOSPHAERIA; BOTRYOSPHAERIA RHODINA; BOTRYOSPHAERIA RIBIS;

EID: 34447130905     PISSN: 15178382     EISSN: 16784405     Source Type: Journal    
DOI: 10.1590/S1517-83822007000200013     Document Type: Article

References (31)

1. Altschul, S.F.; Gish, W.; Miller, W.; Myers, E.W.; Lipman, D.J. (1990). Basic local alignment search tool. J. Mol. Biol., 215, 403-410.
2. Cunha, M.A.A.; Barbosa, A.M.; Giese, E.C.; Dekker, R.F.H. (2003). The effect of carbohydrate carbon sources on the production of constitutive and inducible laccases by Botryosphaeria sp. J. Basic. Microbiol., 43, 385-392.
3. Alves, A.; Phillips, A.J.L.; Henriques, I.; Correia, A. (2005). Evaluation of amplified ribosomal DNA restriction analysis as a method for the identification of Botryosphaeria species. FEMS Microbiol. Lett., 245, 221-229.
4. Barbosa, A.M.; Dekker, R.F.H.; Hardy, G.E.S.St. (1996). Veratryl alcohol as inducer of laccase by ascomycete, Botryosphaeria sp., when screened on polymeric dye Poly R-478. Lett. Appl. Microbiol., 23, 93-96.
5. Barbosa, A.M.; Steluti, R.M.; Dekker, R.F.H.; Cardoso, M.S.; Corradi da Silva, M.L. (2003). Structural characterization of botryosphaeran: a (1→3;1→6)-β-D-glucan produced by the ascomyceteous fungus. Botryosphaeria sp. Carbohydr. Res., 338, 1691-1698.
6. Bogo, M.R.; Queiroz, M.V; Giménez, D.M.; Azevedo, J.L.; Schrank, A. (1996). Double-stranded RNA and isomeric viral particles isolated from the entomopathogenic fungus Metarhizium anisopliae. Mycol. Res., 100, 1468-1472.
7. Crous, P.W.; Hong, L.; Wingfield, B.D.; Wingfield, M.J. (2001). ITS rDNA phylogeny of selected Mycosphaerella species and their anamorphs occurring on Myrtaceae. Mycol. Res., 105, 425-431.
8. Dekker, R.F.H.; Barbosa, A.M. (2001). The effects of aeration and veratryl alcohol on the production of two laccases by the ascomycete Botryosphaeria sp. Enzyme Microb. Technol., 28, 81-88.
9. Dekker, R.F.H.; Vasconcelos, A.F.D.; Barbosa, A.M.; Giese, E.C.; Paccola-Meirelles L. (2001). A new role for veratryl alcohol: regulation of synthesis of lignocellulose-degrading enzymes in the ligninolytic ascomyceteous fungus, Botryosphaeria sp.; influence of carbon source. Biotechnol. Lett., 23, 1987-1993.
10. Denman, S.; Crous, P.W.; Taylor, J.E.; Kang, J.C.; Pascoe, I.; Wingfield, M.J. (2000). An overview of the taxonomic history of Botryosophaeria, and a re-evaluation of its anamorphs based on morphology and ITS rDNA phylogeny. Stud. Mycol., 45, 129-140.
11. Giese, E.C.; Covizzi, L.G.; Borsato, D.; Dekker, R.F.H.; Corradi da Silva, M.L.; Barbosa, A.M. (2005). Botryosphaeran, a new substrate for the production of β-1,3-glucanases by Botryosphaeria rhodina and Trichoderma harzianum Rifai. Process Biochem., 40, 3783-3788.
12. Gordon, D.; Abajian, C.; Green, P. (1998). Consed: a graphical tool for sequence finishing. Genome Res., 8, 195-202.
13. Hall, T.A. (1999). BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser., 41, 95-98.
14. Hseu, R.S.; Wang, H.H.; Wang, H.F.; Moncalvo, J.M. (1996). Differentiation and grouping of isolates of the Ganoderma lucidum complex by random amplified polymorphic DNA-PCR compared with grouping on the basis of internal transcribed spacer sequences. Appl. Environ. Microbiol., 62, 1354-1363.
15. Jacobs, K.A.; Rehner, S.A. (1998). Comparison of cultural and morphological characters and ITS sequences in anamorphs of Botryosphaeria and related taxa. Mycologia, 90, 601-610.
16. Mayer, A.M.; Staples, R.C. (2002). Laccase, new functions for an old enzyme. Phytochem., 60, 551-565.
17. McClendon, J.H.; Somers, G.F.; Heuberger, J.W. (1960). The occurrence of a variety of enzymes hydrolysing cell wall polysaccharides in apples rotted by Botryosphaeria ribis. Phytopathology., 50, 258-261.
18. Rohlf, F.J. (1987). NTSYS-pc: Microcomputer programs for numerical taxonomy and multivariate analysis. Am. Stat., 41, 330.
19. Sambrook, J.; Russel, D.W. (2001). Molecular cloning: A laboratory manual. Cold Spring Harbour Laboratory Press, New York.
20. Silva, E.G.; Borges, M.F.; Medina, C.; Piccoli, R.H.; Schwan, R.F. (2005). Pectinolytic enzymes secreted by yeasts from tropical fruits. FEMS Yeast Res., 5, 859-865.
21. Silveira, R.L.V.A.; Krugner, T.L.; Silveira, R.I.; Gonçalves, A.N. (1996). Efeito de boro na suscetibilidade de Eucalytptus citriodora a Botryosphaeria ribis e Lasiodiplodia theobraomae. Fitopatol. Bras., 2, 482-485.
22. Slippers, B.; Crous, P.W.; Denman, S.; Coutinho, T.A.; Wingfield, B.D.; Wingfield, M.J. (2004). Combined multiple gene genealogies and phenotypic characters differentiate several species previously identified as Botryosphaeria dothidea. Mycologia, 96, 83-101.
23. Sneath, P.H.A.; Sokal, R.R. (1973). Numerical taxonomy: The principles and practice of numerical classification. W.H. Freeman, San Francisco.
24. Somogyi, M. (1945). A new reagent for determination of sugars. J. Biol. Chem., 160, 61-68.
25. Stanosz, G.R.; Smith, D.R.; Guthmiller, M.A. (1996). Characterization of Sphaeropsis sapinea from the west central United States by means of random amplified polymorphic DNA marker analysis. Plant Disease, 80, 1175-1178.
26. Thompson, J.D.; Gibson, T.J.; Plewniak, F.; Jeanmougin, F.; Higgins, D.G. (1997). The Clustal X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res., 24, 4876-4882.
27. Vasconcelos, A.D.F.; Barbosa, A.M.; Dekker, R.F.H.; Scarminio, I.S.; Rezende, M.I. (2000). Optimization of laccase production by Botryosphaeria sp. in the presence of veratryl alcohol by the response-surface method. Process Biochem., 35, 1131-1138.
28. Vasconcelos, A.D.F.; Dekker, R.F.H.; Barbosa, A.M.; Paccola-Meirelles, L. (2001). Comparison of the laccases, molecular marker proteins, and induction of pycnidia by three species of botryosphaeriaceous fungi. Mycoscience, 42, 543-548.
29. Vogel, H.J. (1956). A convenient growth medium for Neurospora crassa. Genet. Bull., 13, 42-43.
30. White, T.J.; Bruns, T.; Lee, S.; Taylor, J. (1990). Amplification and direct sequencing of fungi ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J., White, T.J. (eds.). PCR protocols: A guide to methods and applications. Academic Press, San Diego, CA, p.315-322.
31. Zhou, S.; Stanosz, G.R. (2001). Primers for amplication of mt SSU rDNA, and a phylogenetic study of Botryosphaeria and associated anamorphic fungi. Mycol. Res., 105, 1033-1044.