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Volumn 371, Issue 1, 2007, Pages 66-78

A Dual-nuclease Mechanism for DNA Break Processing by AddAB-type Helicase-nucleases

Author keywords

AddAB; DNA helicase; DNA recombination; DNA repair; RecBCD

Indexed keywords

ADDAB TYPE ENZYME; BACTERIAL ENZYME; DNA; DNA FRAGMENT; HELICASE; MUTANT PROTEIN; NUCLEASE; SINGLE STRANDED DNA; UNCLASSIFIED DRUG;

EID: 34447095032     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2007.05.053     Document Type: Article
Times cited : (52)

References (26)
  • 1
    • 0034696750 scopus 로고    scopus 로고
    • The Bacillus subtilis AddAB helicase/nuclease is regulated by its cognate Chi sequence in vitro
    • Chedin F., Ehrlich S.D., and Kowalczykowski S.C. The Bacillus subtilis AddAB helicase/nuclease is regulated by its cognate Chi sequence in vitro. J. Mol. Biol. 298 (2000) 7-20
    • (2000) J. Mol. Biol. , vol.298 , pp. 7-20
    • Chedin, F.1    Ehrlich, S.D.2    Kowalczykowski, S.C.3
  • 2
    • 0037031655 scopus 로고    scopus 로고
    • Identification of a DNA nonhomologous end-joining complex in bacteria
    • Weller G.R., Kysela B., Roy R., Tonkin L.M., Scanlan E., Della M., et al. Identification of a DNA nonhomologous end-joining complex in bacteria. Science 297 (2002) 1686-1689
    • (2002) Science , vol.297 , pp. 1686-1689
    • Weller, G.R.1    Kysela, B.2    Roy, R.3    Tonkin, L.M.4    Scanlan, E.5    Della, M.6
  • 3
    • 0036228220 scopus 로고    scopus 로고
    • A novel family of regulated helicases/nucleases from Gram-positive bacteria: insights into the initiation of DNA recombination
    • Chedin F., and Kowalczykowski S.C. A novel family of regulated helicases/nucleases from Gram-positive bacteria: insights into the initiation of DNA recombination. Mol. Microbiol. 43 (2002) 823-834
    • (2002) Mol. Microbiol. , vol.43 , pp. 823-834
    • Chedin, F.1    Kowalczykowski, S.C.2
  • 4
    • 0035103540 scopus 로고    scopus 로고
    • Distinctive features of homologous recombination in an 'old' microorganism, Lactococcus lactis
    • Quiberoni A., Rezaiki L., El Karoui M., Biswas I., Tailliez P., and Gruss A. Distinctive features of homologous recombination in an 'old' microorganism, Lactococcus lactis. Res. Microbiol. 152 (2001) 131-139
    • (2001) Res. Microbiol. , vol.152 , pp. 131-139
    • Quiberoni, A.1    Rezaiki, L.2    El Karoui, M.3    Biswas, I.4    Tailliez, P.5    Gruss, A.6
  • 5
    • 9244236007 scopus 로고    scopus 로고
    • The recombination genes addAB are not restricted to Gram-positive bacteria: genetic analysis of the recombination initiation enzymes RecF and AddAB in Rhizobium etli
    • Zuniga-Castillo J., Romero D., and Martinez-Salazar J.M. The recombination genes addAB are not restricted to Gram-positive bacteria: genetic analysis of the recombination initiation enzymes RecF and AddAB in Rhizobium etli. J. Bacteriol. 186 (2004) 7905-7913
    • (2004) J. Bacteriol. , vol.186 , pp. 7905-7913
    • Zuniga-Castillo, J.1    Romero, D.2    Martinez-Salazar, J.M.3
  • 7
    • 0016379860 scopus 로고
    • Analysis of the growth of recombination-deficient strains of Escherichia coli K-12
    • Capaldo F.N., Ramsey G., and Barbour S.D. Analysis of the growth of recombination-deficient strains of Escherichia coli K-12. J. Bacteriol. 118 (1974) 242-249
    • (1974) J. Bacteriol. , vol.118 , pp. 242-249
    • Capaldo, F.N.1    Ramsey, G.2    Barbour, S.D.3
  • 8
    • 0016607211 scopus 로고
    • The role of the rec genes in the viability of Escherichia coli K12
    • Capaldo F.N., and Barbour S.D. The role of the rec genes in the viability of Escherichia coli K12. Basic Life Sci. 5A (1975) 405-418
    • (1975) Basic Life Sci. , vol.5 A , pp. 405-418
    • Capaldo, F.N.1    Barbour, S.D.2
  • 9
    • 0024095421 scopus 로고
    • Cloning and characterization of a Bacillus subtilis transcription unit involved in ATP-dependent DNase synthesis
    • Kooistra J., Vosman B., and Venema G. Cloning and characterization of a Bacillus subtilis transcription unit involved in ATP-dependent DNase synthesis. J. Bacteriol. 170 (1988) 4791-4797
    • (1988) J. Bacteriol. , vol.170 , pp. 4791-4797
    • Kooistra, J.1    Vosman, B.2    Venema, G.3
  • 10
    • 0031713244 scopus 로고    scopus 로고
    • A five-nucleotide sequence protects DNA from exonucleolytic degradation by AddAB, the RecBCD analogue of Bacillus subtilis
    • Chedin F., Noirot P., Biaudet V., and Ehrlich S.D. A five-nucleotide sequence protects DNA from exonucleolytic degradation by AddAB, the RecBCD analogue of Bacillus subtilis. Mol. Microbiol. 29 (1998) 1369-1377
    • (1998) Mol. Microbiol. , vol.29 , pp. 1369-1377
    • Chedin, F.1    Noirot, P.2    Biaudet, V.3    Ehrlich, S.D.4
  • 11
    • 0030969429 scopus 로고    scopus 로고
    • The recombination hot spot chi is a regulatory element that switches the polarity of DNA degradation by the RecBCD enzyme
    • Anderson D.G., and Kowalczykowski S.C. The recombination hot spot chi is a regulatory element that switches the polarity of DNA degradation by the RecBCD enzyme. Genes Dev. 11 (1997) 571-581
    • (1997) Genes Dev. , vol.11 , pp. 571-581
    • Anderson, D.G.1    Kowalczykowski, S.C.2
  • 12
    • 33745838577 scopus 로고    scopus 로고
    • The AddAB helicase/nuclease forms a stable complex with its cognate chi sequence during translocation
    • Chedin F., Handa N., Dillingham M.S., and Kowalczykowski S.C. The AddAB helicase/nuclease forms a stable complex with its cognate chi sequence during translocation. J. Biol. Chem. 281 (2006) 18610-18617
    • (2006) J. Biol. Chem. , vol.281 , pp. 18610-18617
    • Chedin, F.1    Handa, N.2    Dillingham, M.S.3    Kowalczykowski, S.C.4
  • 13
    • 0034614654 scopus 로고    scopus 로고
    • A single nuclease active site of the Escherichia coli RecBCD enzyme catalyzes single-stranded DNA degradation in both directions
    • Wang J., Chen R., and Julin D.A. A single nuclease active site of the Escherichia coli RecBCD enzyme catalyzes single-stranded DNA degradation in both directions. J. Biol. Chem. 275 (2000) 507-513
    • (2000) J. Biol. Chem. , vol.275 , pp. 507-513
    • Wang, J.1    Chen, R.2    Julin, D.A.3
  • 14
    • 0032477911 scopus 로고    scopus 로고
    • The 30-kDa C-terminal domain of the RecB protein is critical for the nuclease activity, but not the helicase activity, of the RecBCD enzyme from Escherichia coli
    • Yu M., Souaya J., and Julin D.A. The 30-kDa C-terminal domain of the RecB protein is critical for the nuclease activity, but not the helicase activity, of the RecBCD enzyme from Escherichia coli. Proc. Natl Acad. Sci. USA 95 (1998) 981-986
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 981-986
    • Yu, M.1    Souaya, J.2    Julin, D.A.3
  • 16
    • 0034971260 scopus 로고    scopus 로고
    • In vivo evidence for two active nuclease motifs in the double-strand break repair enzyme RexAB of Lactococcus lactis
    • Quiberoni A., Biswas I., El Karoui M., Rezaiki L., Tailliez P., and Gruss A. In vivo evidence for two active nuclease motifs in the double-strand break repair enzyme RexAB of Lactococcus lactis. J. Bacteriol. 183 (2001) 4071-4078
    • (2001) J. Bacteriol. , vol.183 , pp. 4071-4078
    • Quiberoni, A.1    Biswas, I.2    El Karoui, M.3    Rezaiki, L.4    Tailliez, P.5    Gruss, A.6
  • 17
    • 0029811915 scopus 로고    scopus 로고
    • The C terminus of the AddA subunit of the Bacillus subtilis ATP-dependent DNase is required for the ATP-dependent exonuclease activity but not for the helicase activity
    • Haijema B.J., Venema G., and Kooistra J. The C terminus of the AddA subunit of the Bacillus subtilis ATP-dependent DNase is required for the ATP-dependent exonuclease activity but not for the helicase activity. J. Bacteriol. 178 (1996) 5086-5091
    • (1996) J. Bacteriol. , vol.178 , pp. 5086-5091
    • Haijema, B.J.1    Venema, G.2    Kooistra, J.3
  • 18
    • 0034664813 scopus 로고    scopus 로고
    • Survey and Summary: Holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories
    • Aravind L., Makarova K.S., and Koonin E.V. Survey and Summary: Holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories. Nucl. Acids Res. 28 (2000) 3417-3432
    • (2000) Nucl. Acids Res. , vol.28 , pp. 3417-3432
    • Aravind, L.1    Makarova, K.S.2    Koonin, E.V.3
  • 19
    • 0032491378 scopus 로고    scopus 로고
    • Identification of the nuclease active site in the multifunctional RecBCD enzyme by creation of a chimeric enzyme
    • Yu M., Souaya J., and Julin D.A. Identification of the nuclease active site in the multifunctional RecBCD enzyme by creation of a chimeric enzyme. J. Mol. Biol. 283 (1998) 797-808
    • (1998) J. Mol. Biol. , vol.283 , pp. 797-808
    • Yu, M.1    Souaya, J.2    Julin, D.A.3
  • 20
    • 1642317185 scopus 로고    scopus 로고
    • Some precautions in using chelators to buffer metals in biological solutions
    • Patton C., Thompson S., and Epel D. Some precautions in using chelators to buffer metals in biological solutions. Cell Calcium 35 (2004) 427-431
    • (2004) Cell Calcium , vol.35 , pp. 427-431
    • Patton, C.1    Thompson, S.2    Epel, D.3
  • 21
    • 0029817559 scopus 로고    scopus 로고
    • Replacement of the lysine residue in the consensus ATP-binding sequence of the AddA subunit of AddAB drastically affects chromosomal recombination in transformation and transduction of Bacillus subtilis
    • Haijema B.J., Noback M., Hesseling A., Kooistra J., Venema G., and Meima R. Replacement of the lysine residue in the consensus ATP-binding sequence of the AddA subunit of AddAB drastically affects chromosomal recombination in transformation and transduction of Bacillus subtilis. Mol. Microbiol. 21 (1996) 989-999
    • (1996) Mol. Microbiol. , vol.21 , pp. 989-999
    • Haijema, B.J.1    Noback, M.2    Hesseling, A.3    Kooistra, J.4    Venema, G.5    Meima, R.6
  • 22
    • 33846555471 scopus 로고    scopus 로고
    • Chi hotspot activity in Escherichia coli without RecBCD exonuclease activity: implications for the mechanism of recombination
    • Amundsen S.K., and Smith G.R. Chi hotspot activity in Escherichia coli without RecBCD exonuclease activity: implications for the mechanism of recombination. Genetics 175 (2007) 41-54
    • (2007) Genetics , vol.175 , pp. 41-54
    • Amundsen, S.K.1    Smith, G.R.2
  • 23
    • 23944518444 scopus 로고    scopus 로고
    • An inactivated nuclease-like domain in RecC with novel function: implications for evolution
    • Rigden D.J. An inactivated nuclease-like domain in RecC with novel function: implications for evolution. BMC Struct. Biol. 5 (2005) 9
    • (2005) BMC Struct. Biol. , vol.5 , pp. 9
    • Rigden, D.J.1
  • 24
    • 21344435463 scopus 로고    scopus 로고
    • Identification of novel restriction endonuclease-like fold families among hypothetical proteins
    • Kinch L.N., Ginalski K., Rychlewski L., and Grishin N.V. Identification of novel restriction endonuclease-like fold families among hypothetical proteins. Nucl. Acids Res. 33 (2005) 3598-3605
    • (2005) Nucl. Acids Res. , vol.33 , pp. 3598-3605
    • Kinch, L.N.1    Ginalski, K.2    Rychlewski, L.3    Grishin, N.V.4
  • 25
    • 0037459374 scopus 로고    scopus 로고
    • Interchangeable parts of the Escherichia coli recombination machinery
    • Amundsen S.K., and Smith G.R. Interchangeable parts of the Escherichia coli recombination machinery. Cell 112 (2003) 741-744
    • (2003) Cell , vol.112 , pp. 741-744
    • Amundsen, S.K.1    Smith, G.R.2
  • 26
    • 0036900120 scopus 로고    scopus 로고
    • Role of RAD52 epistasis group genes in homologous recombination and double-strand break repair
    • Symington L.S. Role of RAD52 epistasis group genes in homologous recombination and double-strand break repair. Microbiol. Mol. Biol. Rev. 66 (2002) 630-670
    • (2002) Microbiol. Mol. Biol. Rev. , vol.66 , pp. 630-670
    • Symington, L.S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.