OsPIPK1, a rice phosphatidylinositol monophosphate kinase, regulates rice heading by modifying the expression of floral induction genes

Plant Molecular Biology

Volumn 54, Issue 2, 2004, Pages 295-310

  Ma, Hui ^a,b   Xu, Shu Ping ^a,b   Luo, Da ^a,b   Xu, Zhi Hong ^a,b   Xue, Hong Wei ^a,b  

^a INSTITUTE OF PLANT PHYSIOLOGY AND ECOLOGY   (China)

^b MAX PLANCK INSTITUTE OF MOLECULAR PLANT PHYSIOLOGY   (Germany)

Author keywords

Floral induction genes; Heading; Oryza sativa; Phosphatidylinositol monophosphate kinase (PIPK)

Indexed keywords

DNA SEQUENCES; ENZYMES; HORMONES; METABOLISM; MORPHOLOGY;

FLORAL INITIATION; TRANSGENIC PLANTS;

MOLECULAR BIOLOGY;

ANIMALIA; ARABIDOPSIS; ARABIDOPSIS THALIANA; ORYZA SATIVA;

1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE; CALCIUM; COMPLEMENTARY DNA; MESSENGER RNA; PHOSPHATIDYLINOSITOL 4 PHOSPHATE KINASE; PHOSPHOTRANSFERASE; PHYTOHORMONE; SALICYLIC ACID; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CHEMISTRY; COMPARATIVE STUDY; DNA SEQUENCE; DRUG EFFECT; ENZYMOLOGY; FLOWER; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; MUTATION; PROTEIN MOTIF; RICE; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY; TIME; YEAST;

AMINO ACID MOTIFS; AMINO ACID SEQUENCE; ANIMALS; CALCIUM; DNA, COMPLEMENTARY; FLOWERS; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENE EXPRESSION REGULATION, PLANT; MOLECULAR SEQUENCE DATA; MUTATION; ORYZA SATIVA; PHOSPHOTRANSFERASES (ALCOHOL GROUP ACCEPTOR); PLANT GROWTH REGULATORS; PLANT PROTEINS; RNA, MESSENGER; SALICYLIC ACID; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; TIME FACTORS; YEASTS;

EID: 3442898274     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/B:PLAN.0000028796.14336.24     Document Type: Article

References (61)

1. 2+ channels in isolated red beet root vacuole membrane by inositol 1,4,5-trisphosphate. Nature 343: 567-570.
2. Auger, K.R., Serunian, L.A., Soltoff, S.P., Libby, P. and Cantley, L.C. 1989. PDGF-dependent tyrosine phosphorylation stimulates production of novel polyphosphoinositides in intact cells. Cell 57: 167-175.
3. Berridge, M.J. 1993. Inositol trisphosphate and calcium signalling. Nature 361: 315-325.
4. Blazquez, M., Koornneef, M. and Putterill, J. 2001. Flowering on time: genes that regulate the floral transition. Workshop on the molecular basis of flowering time control. EMBO Rep. 2: 1078-1082.
5. Boronenkov, I.V., Loijens, J.C. and Anderson, R.A. 1998. Phosphoinositide signaling pathways in nuclei are associated with nuclear speckles containing pre-mRNA processing factors. Mol. Cell Biol. 9: 3547-3560.
6. Bunney, T.D., Watkins, P.A.C., Beven, A.F., Shaw, P.J., Hernandez, L.E., Lomonosso, G.P., Shanks, M., Peart, J. and Dr¢bak, B.K. 2000. Association of phosphatidylinositol 3-kinase with nuclear transcription sites in higher plants. Plant Cell 12: 1679-1688.
7. Cantley, L.C., Auger, K.R., Carpenter, C., Duckworth, B., Graziani, A., Kapeller, R. and Soltoff, S. 1991. Oncogenes and signal transduction. Cell 64: 281-302.
8. Chong, L.D., Traynor-Kaplan, A., Bokoch, G.M. and Schwartz, M.A. 1994. The small GTP-binding protein Rho regulates a phosphatidylinositol 4-phosphate 5-kinase in mammalian cells. Cell 79: 507-513.
9. Colley, W.C., Sung, T.C., Roll, R., Jenco, J., Hammond, S.M., Altshuller, Y., Bar-Sagi, D., Morris, A.J. and Frohman, M.A. 1997. Phospholipase D2, a distinct phospholipase D isoform with novel regulatory properties that provokes cytoskeletal reorganization. Curr. Biol. 7: 191-201.
10. Cooke, F.T., Dove, S.K., McEwen, R.K., Painter, G., Holmes, A.B., Hall, M.N., Michell, R.H. and Parker, P.J. 1998. The stress-activated phosphatidylinositol 3-phosphate 5-kinase Fab1p is essential for vacuole function in S. cerevisiae. Curr. Biol. 8: 1219-1222.
11. De Camilli, P., Emr, S.D., McPherson, P.S. and Novick, P. 1996. Phosphoinositides as regulators in membrane traffic. Science 271: 1533-1539.
12. Deak, M., Casamayor, A., Currie, R.A., Downes, C.P. and Alessi, D.R. 1999. Characterisation of a plant 3-phosphoinositide-dependent protein kinase-1 homologue which contains a pleckstrin homology domain. FEBS Lett. 451: 220-226.
13. DeWald, D.B., Torabinejad, J., Jones, C.A., Shope, J.C., Cangelosi, A.R., Thompson, J.E., Prestwich, G.D. and Hama, H. 2001. Rapid accumulation of phosphatidylinositol 4,5-bisphosphate and inositol 1,4,5-trisphosphate correlates with calcium mobilization in salt-stressed Arabidopsis. Plant Physiol. 126: 759-769.
14. Divecha, N., Banfic, H. and Irvine, R.F. 1993. Inositides and the nucleus and inositides in the nucleus. Cell 74: 405-407.
15. Dr¢bak, B.K., Watkins, P.A.C., Valenta, R., Dove, S.K., Lloyd, C.W. and Staiger, C.J. 1994. Inhibition of plant plasma membrane phosphoinositide phospholipase C by the actin-binding protein, profiling. Plant J. 6: 389-400.
16. Eisen, M.B., Spellman, P.T., Brown, P.O. and Botstein, D. 1998. Cluster analysis and display of genome-wide expression patterns. Proc. Natl Acad. Sci. USA 95: 14863-14868.
17. 3 in insect cells by 5-phosphorylation of precursors. Plant J. 26: 561-571.
18. Ferrandiz, C., Gu, Q., Martienssen, R. and Yanofsky, M.F. 2000. Redundant regulation of meristem identity and plant architecture by FRUITFULL, APETALA1 and CAULIFLOWER. Development 127: 725-734.
19. 2 and clathrin by AP180 in the nucleation of Clathrin lattices on membranes. Science 291: 1051-1055.
20. Gilroy, S., Read, N.D. and Trewavas, A.J. 1990. Elevation of cytoplasmic calcium by caged calcium or caged inositol trisphosphate initiates stomatal closure. Nature 346: 769-771.
21. Gross, S.D. and Anderson, R.A. 1998. Casein kinase I: spatial organization and positioning of a multifunctional protein kinase family. Cell Signal. 10: 699-711.
22. Hammond, S.M., Jenco, J.M., Nakashima, S., Cadwallader, K., Gu, Q., Cook, S., Nozawa, Y., Prestwich, G.D., Frohman, M.A. and Morris, A.J. 1997. Characterization of two alternately spliced forms of phospholipase D1. Activation of the purified enzymes by phosphatidylinositol 4,5-bisphosphate, ADP-ribosylation factor, and Rho family monomeric GTP-binding proteins and protein kinase C-alpha. J. Biol. Chem. 272: 3860-3868.
23. Hartwig, J.H., Bokoch, G.M., Carpenter, C.L., Janmey, P.A., Taylor, L.A., Toker, A. and Stossel, T.P. 1995. Thrombin receptor ligation and activated Rac uncap actin filament barbed ends through phosphoinositide synthesis in permeabilized human platelets. Cell 82: 643-653.
24. Hayama, R., Izawa, T. and Shimamoto, K. 2002. Isolation of rice genes possibly involved in the photoperiodic control of flowering by a fluorescent differential display method. Plant Cell Physiol. 43: 494-504.
25. Hayama, R., Yokoi, S., Tamaki, S., Yano, M. and Shimamoto, K. 2003. Adaptation of photoperiodic control pathways produces short-day flowering in rice. Nature 422: 719-722.
26. Hirayama, T., Ohto, C., Mizoguchi, T. and Shinozaki, K. 1995. A gene encoding a phosphatidylinositol-specific phospholipase C is induced by dehydration and salt stress in Arabidopsis thaliana. Proc. Natl Acad. Sci. USA 92: 3903-3907.
27. Honda, A., Nogami, M., Yokozeki, T., Yamazaki, M., Nakamura, H., Watanabe, H., Kawamoto, K., Nakayama, K., Morris, A.J., Frohman, M.A. and Kanaho, Y. 1999. Phosphatidylinositol 4-phosphate 5-kinase alpha is a downstream effector of the small G protein ARF6 in membrane ruffle formation. Cell 99: 521-532.
28. Itoh, J.I., Hasegawa, A., Kitano, H. and Nagato, Y. 1998. A recessive heterochronic mutation, plastochron1, shortens the plastochron and elongates the vegetative phase in rice. Plant Cell 10: 1511-1521.
29. Jefferson, R.A., Kavanagh, T.A. and Bevan, M.W. 1987. GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6: 3901-3907.
30. Jeon, J.S., Jang, S., Lee, S., Nam, J., Kim, C., Lee, S., Chung, Y., Kim, S., Lee, Y.H., Cho, Y. and An, G. 2000. Leafy hull sterile1 is a homeotic mutation in a rice MADS box gene affecting rice flower development. Plant Cell 12: 871-884.
31. Kojima, S., Monna, L., Fuse, T., Sasaki, T. and Yano, M. 2001. Abstract of Plant and Animal Genome IX (abstract No. P116) p. 90.
32. Kost, B., Lemichez, E., Spielhofer, P., Hong, Y., Tolias, K., Carpenter, C. and Chua, N.H. 1999. Rac homologues and compartmentalized phosphatidylinositol 4,5-bisphosphate act in a common pathway to regulate polar pollen tube growth. J. Cell Biol. 145: 317-330.
33. Kunst, L., Klenz, I.E., Martinez-Zapater, J. and Haughn, G.W. 1989. AP2 gene determines the identity of perianth organs in flowers of Arabidopsis thaliana. Plant Cell 1: 1195-1208.
34. McEwen, R.K., Dove, S.K., Cooke, F.T., Painter, G.F., Holmes, A.B., Shisheva, A., Ohya, Y., Parker, P.J. and Michell, R.H. 1999. Complementation analysis in PtdInsP kinase-deficient yeast mutants demonstrates that Schizosaccharomyces pombe and murine Fab1p homologues are phosphatidylinositol 3-phosphate 5-kinases. J. Biol. Chem. 274: 33905-33912.
35. Meijer, H.J.G., Divecha, N., van den Ende, H., Musgrave, A. and Munnik, T. 1999. Hyperosmotic stress induces rapid synthesis of phosphatidyl-D-inositol 3,5-bisphosphate in plant cells. Planta 208: 294-298.
36. Mikami, K., Katagiri, T., Iuchi, S., Yamaguchi-Shinozaki, K. and Shinozaki, K. 1998. A gene encoding phosphatidylinositol-4-phosphate 5-kinase is induced by water stress and abscisic acid in Arabidopsis thaliana. Plant J. 15: 563-568.
37. Mueller-Roeber, B. and Pical, C. 2002. Inositol phospholipid metabolism in Arabidopsis. Characterized and putative isoforms of inositol phospholipid kinase and phosphoinositide-specific phospholipase C. Plant Physiol. 130: 22-46.
38. Pelaz, S., Ditta, G.S., Baumann, E., Wisman, E. and Yanofsky, M.F. 2000. B and C floral organ identity functions require SEPALLATA MADS-box genes. Nature 405: 200-203.
39. Pical, C., Westergren, T., Dove, S.K., Larsson, C. and Sommarin, M. 1999. Salinity and hyperosmotic stress induce rapid increases in phosphatidylinositol 4,5-bisphosphate, diacylglycerol pyrophosphate, and phosphatidylcholine in Arabidopsis thaliana cells. J Biol. Chem. 274: 38232-38240.
40. Putterill, J., Robson, F., Lee, K., Simon, R. and Coupland, G. 1995. The CONSTANS gene of Arabidopsis promotes flowering and encodes a protein showing similarities to zinc finger transcription factors. Cell 80: 847-857.
41. Randazzo, P.A. and Kahn, R.A. 1994. GTP hydrolysis by ADP-ribosylation factor is dependent on both an ADP-ribosylation factor GTPase-activating protein and acid phospholipids. J. Biol. Chem. 269: 10758-10763.
42. Riechmann, J.L. and Ratcliffe, O.J. 2000. A genomic perspective on plant transcription factors. Curr. Opin. Plant. Biol. 3: 423-434.
43. Samach, A. and Coupland, G. 2000. Time measurement and the control of flowering in plants. Bioessays 22: 38-47.
44. Sambrook, J. and Russell, D.W. 2001. Molecular Cloning: A Laboratory Mannual, 3rd edn. Cold Spring Harbor Laboratory Press.
45. Simpson, G.G., Gendall, A.R. and Dean, C. 1999. When to switch to flowering. Annu. Rev. Cell Dev. Biol. 15: 519-550.
46. Souer, E., Houwelingen, A., Kloos, D., Mol, J. and Koes, R. 1996. The No Apical Meristem gene of petuniais required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries. Cell 85: 159-170.
47. Stevenson, J.M., Perera, I.Y., Heilmann, I., Persson, S. and Boss, W.F. 2000. Inositol signalling and plant growth. Trends Plant Sci. 5: 252-258.
48. Takenawa, T. and Itoh, T. 2001. Phosphoinositides, key molecules for regulation of actin cytoskeletal organization and membrane traffic from the plasma membrane. Biochim. Biophys. Acta 1533: 190-206.
49. Takeshima, H., Komazaki, S., Nishi, M., Iino, M. and Kangawa, K. 2000. Junctophilins: a novel family of junctional membrane complex proteins. Mol. Cell 6: 11-22.
50. Toker, A. 1998. The synthesis and cellular roles of phosphatidylinositol 4,5-bisphosphate. Curr. Opin. Cell Biol. 10: 254-261.
51. Tolias, K.F., Rameh, L.E., Ishihara, H., Shibasaki, Y., Chen, J., Prestwich, G.D., Cantley, L.C. and Carpenter, C.L. 1998. Type I phosphatidylinositol-4-phosphate 5-kinases synthesize the novel lipids phosphatidylinositol 3,5-bisphosphate and phosphatidylinositol 5-phosphate. J. Biol. Chem. 273: 18040-18046.
52. Welters, P., Takegawa, K., Emr, S.D. and Chrispeels, M.J. 1994. AtVPS34, a phosphatidylinositol 3-kinase of Arabidopsis thaliana, is an essential protein with homology to a calcium-dependent lipid binding domain. Proc. Natl Acad. Sci. USA 91: 11398-11402.
53. 2 in vitro and is inhibited by phosphorylation. Biochem. J. 359: 583-589.
54. Wurmser, A.E., Gary, J.D. and Emr, S.D. 1999. Phosphoinositide 3-kinases and their FYVE domain-containing effectors as regulators of vacuolar/lysosomal membrane tracking pathways. J. Biol. Chem. 274: 9129-9132.
55. Wymann, M.P. and Pirola, L. 1998. Structure and function of phosphoinositide 3-kinases. Biochim. Biophys. Acta 1436: 127-150.
56. Xue, H.W., Hosaka, K., Plesch, G. and Mueller-Roeber, B. 2000. Cloning of Arabidopsis thaliana phosphatidylinositol synthase and functional expression in the yeast pis mutant. Plant Mol. Biol. 42: 757-764.
57. Xue, H.W., Pical, C., Brearley, C., Elge, S. and Mueller-Roeber, B. 1999. A plant 126-kDa phosphatidylinositol 4-kinase with a novel repeat structure. Cloning and functional expression in baculovirus-infected insect cells. J. Biol. Chem. 274: 5738-5745.
58. Yang, W., Burkhart, W., Cavallius, J., Merrick, W.C. and Boss, W.F. 1993. Purification and characterization of a phosphatidylinositol 4-kinase activator in carrot cells. J. Biol. Chem. 268: 392-398.
59. Yano, M., Katayose, Y., Ashikari, M., Yamanouchi, U., Monna, L., Fuse, T., Baba, T., Yamamoto, K., Umehara, Y., Nagamura, Y. and Sasaki, T. 2000. Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS. Plant Cell 12: 2473-2484.
60. Yano, M., Kojima, S., Takahashi, Y., Lin, H.X. and Sasaki, T. 2001. Genetic control of flowering time in rice, a short-day plant. Plant Physiol. 127: 1425-1429.
61. Zhang, X., Loijens, J.C., Boronenkov, I.V., Parker, G.J., Norris, F.A., Chen, J., Thum, O., Prestwich, G.D., Majerus, P.W. and Anderson, R.A. 1997. Phosphatidylinositol-4-phosphate 5-kinase isozymes catalyze the synthesis of 3-phosphate-containing phosphatidylinositol signaling molecules. J. Biol. Chem. 272: 17756-17761.