-
2
-
-
0024502968
-
Spontaneous and UV-induced mutations in Escherichia coli K-12 strains with altered or absent DNA polymerase I
-
Bates, H., S. K. Randall, C. Rayssiguier, B. A. Bridges, M. F. Goodman, and M. Radman. 1989. Spontaneous and UV-induced mutations in Escherichia coli K-12 strains with altered or absent DNA polymerase I. J. Bacteriol. 171:2480-2484.
-
(1989)
J. Bacteriol
, vol.171
, pp. 2480-2484
-
-
Bates, H.1
Randall, S.K.2
Rayssiguier, C.3
Bridges, B.A.4
Goodman, M.F.5
Radman, M.6
-
3
-
-
0025160871
-
The fidelity of DNA synthesis catalyzed by derivatives of Escherichia coli DNA polymerase I
-
Bebenek, K., C. M. Joyce, M. P. Fitzgerald, and T. A. Kunkel. 1990. The fidelity of DNA synthesis catalyzed by derivatives of Escherichia coli DNA polymerase I. J. Biol. Chem. 265:13878-13887.
-
(1990)
J. Biol. Chem
, vol.265
, pp. 13878-13887
-
-
Bebenek, K.1
Joyce, C.M.2
Fitzgerald, M.P.3
Kunkel, T.A.4
-
4
-
-
0037019606
-
Pivotal role of the beta-clamp in translesion DNA synthesis and mutagenesis in E. coli cells
-
Becherel, O. J., R. P. Fuchs, and J. Wagner. 2002. Pivotal role of the beta-clamp in translesion DNA synthesis and mutagenesis in E. coli cells. DNA Repair 1:703-708.
-
(2002)
DNA Repair
, vol.1
, pp. 703-708
-
-
Becherel, O.J.1
Fuchs, R.P.2
Wagner, J.3
-
5
-
-
33745071496
-
Dynamics of loading the Escherichia coli DNA polymerase processivity clamp
-
Bloom, L. B. 2006. Dynamics of loading the Escherichia coli DNA polymerase processivity clamp. Crit. Rev. Biochem. Mol. Biol. 41:179-208.
-
(2006)
Crit. Rev. Biochem. Mol. Biol
, vol.41
, pp. 179-208
-
-
Bloom, L.B.1
-
6
-
-
0026725774
-
-
Bonner, C. A., P. T. Stukenberg, M. Rajagopalan, R. F.ritja, M. O'Donnell, K. McEntee, H. Echols, and M. F. Goodman. 1992. Processive DNA synthesis by DNA polymerase II mediated by DNA polymerase III accessory proteins. J. Biol. Chem. 267:11431-11438.
-
Bonner, C. A., P. T. Stukenberg, M. Rajagopalan, R. F.ritja, M. O'Donnell, K. McEntee, H. Echols, and M. F. Goodman. 1992. Processive DNA synthesis by DNA polymerase II mediated by DNA polymerase III accessory proteins. J. Biol. Chem. 267:11431-11438.
-
-
-
-
7
-
-
77955094232
-
The dnaN gene codes for the beta subunit of DNA polymerase III holoenzyme of Escherichia coli
-
Burgers, P. M., A. Kornberg, and Y. Sakakibara. 1981. The dnaN gene codes for the beta subunit of DNA polymerase III holoenzyme of Escherichia coli. Proc. Natl. Acad. Sci. USA 78:5391-5395.
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 5391-5395
-
-
Burgers, P.M.1
Kornberg, A.2
Sakakibara, Y.3
-
8
-
-
0035949599
-
A universal protein-protein interaction motif in the cubacterial DNA replication and repair systems
-
Dalrymple, B. P., K. Kongsuwan, G. Wijffels, N. E. Dixon, and P. A. Jennings. 2001. A universal protein-protein interaction motif in the cubacterial DNA replication and repair systems. Proc. Natl. Acad. Sci. USA 98:11627-11632.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 11627-11632
-
-
Dalrymple, B.P.1
Kongsuwan, K.2
Wijffels, G.3
Dixon, N.E.4
Jennings, P.A.5
-
9
-
-
0842281648
-
Identification of specific amino acid residues in the E. coli beta processivity clamp involved in interactions with DNA polymerase III, UmuD and UmuD
-
Duzen, J. M., G. C. Walker, and M. D. Sutton. 2004. Identification of specific amino acid residues in the E. coli beta processivity clamp involved in interactions with DNA polymerase III, UmuD and UmuD'. DNA Repair 3:301-312.
-
(2004)
DNA Repair
, vol.3
, pp. 301-312
-
-
Duzen, J.M.1
Walker, G.C.2
Sutton, M.D.3
-
10
-
-
0032543992
-
Unequal fidelity of leading strand and lagging strand DNA replication on the Escherichia coli chromosome
-
Fijalkowska, I. J., P. Jonczyk, M. M. Tkaczyk, M. Bialoskorska, and R. M. Schaaper. 1998. Unequal fidelity of leading strand and lagging strand DNA replication on the Escherichia coli chromosome. Proc. Natl. Acad. Sci. USA 95:10020-10025.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 10020-10025
-
-
Fijalkowska, I.J.1
Jonczyk, P.2
Tkaczyk, M.M.3
Bialoskorska, M.4
Schaaper, R.M.5
-
11
-
-
0004228157
-
-
2nd ed. ASM Press, Washington, DC
-
Friedberg, E. C., G. C. Walker, W. Siede, R. D. Wood, R. A. Schultz, and T. Ellenberger. 2006. DNA repair and mutagenesis, 2nd ed. ASM Press, Washington, DC.
-
(2006)
DNA repair and mutagenesis
-
-
Friedberg, E.C.1
Walker, G.C.2
Siede, W.3
Wood, R.D.4
Schultz, R.A.5
Ellenberger, T.6
-
12
-
-
0037435421
-
Use of the rpoB gene to determine the specificity of base substitution mutations on the Escherichia coli chromosome
-
Garibyan, L., T. Huang, M. Kim, E. Wolff, A. Nguyen, T. Nguyen, A Diep, K. Hu, A. Iverson, H. Yang, and J. H. Miller. 2003. Use of the rpoB gene to determine the specificity of base substitution mutations on the Escherichia coli chromosome. DNA Repair 2:593-608.
-
(2003)
DNA Repair
, vol.2
, pp. 593-608
-
-
Garibyan, L.1
Huang, T.2
Kim, M.3
Wolff, E.4
Nguyen, A.5
Nguyen, T.6
Diep, A.7
Hu, K.8
Iverson, A.9
Yang, H.10
Miller, J.H.11
-
13
-
-
0036330785
-
Lack of strand bias in UV-induced mutagenesis in Escherichia coli
-
Gawel, D., M. Maliszewska-Tkaczyk, P. Jonczyk, R. M. Schaaper, and I. J. Fijalkowska. 2002. Lack of strand bias in UV-induced mutagenesis in Escherichia coli. J. Bacteriol. 184:4449-4454.
-
(2002)
J. Bacteriol
, vol.184
, pp. 4449-4454
-
-
Gawel, D.1
Maliszewska-Tkaczyk, M.2
Jonczyk, P.3
Schaaper, R.M.4
Fijalkowska, I.J.5
-
14
-
-
0036015646
-
Replication fork reversal in DNA polymerase III mutants of Escherichia coli: A role for the beta clamp
-
Grompone, G., M. Seigneur, S. D. Ehrlich, and B. Michel. 2002. Replication fork reversal in DNA polymerase III mutants of Escherichia coli: a role for the beta clamp. Mol. Microbiol. 44:1331-1339.
-
(2002)
Mol. Microbiol
, vol.44
, pp. 1331-1339
-
-
Grompone, G.1
Seigneur, M.2
Ehrlich, S.D.3
Michel, B.4
-
15
-
-
0027194501
-
A rapid method for cloning mutagenic DNA repair genes: Isolation of umu-complementing genes from multidrug resistance plasmids R391, R446b, and R471a
-
Ho, C., O. I. Kulaeva, A. S. Levine, and R. Woodgate. 1993. A rapid method for cloning mutagenic DNA repair genes: isolation of umu-complementing genes from multidrug resistance plasmids R391, R446b, and R471a. J. Bacteriol. 175:5411-5419.
-
(1993)
J. Bacteriol
, vol.175
, pp. 5411-5419
-
-
Ho, C.1
Kulaeva, O.I.2
Levine, A.S.3
Woodgate, R.4
-
16
-
-
0018150267
-
Reduction of postreplication DNA repair in two Escherichia coli mutants with temperature-sensitive polymerase III activity: Implications for the postreplication repair pathway
-
Johnson, R. C. 1978. Reduction of postreplication DNA repair in two Escherichia coli mutants with temperature-sensitive polymerase III activity: implications for the postreplication repair pathway. J. Bacteriol. 136:125-130.
-
(1978)
J. Bacteriol
, vol.136
, pp. 125-130
-
-
Johnson, R.C.1
-
17
-
-
0001464258
-
Construction of a plasmid that overproduces the large proteolytic fragment (Klenow fragment) of DNA polymerase I of Escherichia coli
-
Joyce, C. M., and N. D. Grindley. 1983. Construction of a plasmid that overproduces the large proteolytic fragment (Klenow fragment) of DNA polymerase I of Escherichia coli. Proc. Natl. Acad. Sci. USA 80:1830-1834.
-
(1983)
Proc. Natl. Acad. Sci. USA
, vol.80
, pp. 1830-1834
-
-
Joyce, C.M.1
Grindley, N.D.2
-
18
-
-
0021368076
-
Method for determining whether a gene of Escherichia coli is essential: Application to the polA gene
-
Joyce, C. M., and N. D. Grindley. 1984. Method for determining whether a gene of Escherichia coli is essential: application to the polA gene. J. Bacteriol. 158:636-643.
-
(1984)
J. Bacteriol
, vol.158
, pp. 636-643
-
-
Joyce, C.M.1
Grindley, N.D.2
-
19
-
-
0000210315
-
Identification of the beta-binding domain of the alpha subunit of Escherichia coli polymerase III holoenzyme
-
Kim, D. R., and C. S. McHenry. 1996. Identification of the beta-binding domain of the alpha subunit of Escherichia coli polymerase III holoenzyme. J. Biol. Chem. 271:20699-20704.
-
(1996)
J. Biol. Chem
, vol.271
, pp. 20699-20704
-
-
Kim, D.R.1
McHenry, C.S.2
-
20
-
-
0021962878
-
Genetic recombination of bacterial plasmid DNA: Effect of RecF pathway mutations on plasmid recombination in Escherichia coli
-
Kolodner, R., R. A Fishel, and M. Howard. 1985. Genetic recombination of bacterial plasmid DNA: effect of RecF pathway mutations on plasmid recombination in Escherichia coli. J. Bacteriol. 163:1060-1066.
-
(1985)
J. Bacteriol
, vol.163
, pp. 1060-1066
-
-
Kolodner, R.1
Fishel, R.A.2
Howard, M.3
-
22
-
-
0032715175
-
Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda
-
Kuzminov, A. 1999. Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda. Microbiol. Mol. Biol. Rev. 63:751-813.
-
(1999)
Microbiol. Mol. Biol. Rev
, vol.63
, pp. 751-813
-
-
Kuzminov, A.1
-
23
-
-
33744932976
-
The beta sliding clamp binds to multiple sites within MutL and MutS
-
Lopez de Saro, F. J., M. G. Marinus, P. Modrich, and M. O'Donnell. 2006. The beta sliding clamp binds to multiple sites within MutL and MutS. J. Biol. Chem. 281:14340-14349.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 14340-14349
-
-
Lopez de Saro, F.J.1
Marinus, M.G.2
Modrich, P.3
O'Donnell, M.4
-
24
-
-
0035902496
-
Interaction of the beta sliding clamp with MutS, ligase, and DNA polymerase I
-
Lopez de Saro, F. J., and M. O'Donnell. 2001. Interaction of the beta sliding clamp with MutS, ligase, and DNA polymerase I. Proc. Natl. Acad. Sci. USA 98:8376-8380.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 8376-8380
-
-
Lopez de Saro, F.J.1
O'Donnell, M.2
-
25
-
-
0024655588
-
Identification of the recR locus of Escherichia coli K-12 and analysis of its role in recombination and DNA repair
-
Mahdi, A. A, and R. G. Lloyd. 1989. Identification of the recR locus of Escherichia coli K-12 and analysis of its role in recombination and DNA repair. Mol. Gen. Genet. 216:503-510.
-
(1989)
Mol. Gen. Genet
, vol.216
, pp. 503-510
-
-
Mahdi, A.A.1
Lloyd, R.G.2
-
26
-
-
0023952130
-
DNA polymerase III holoenzyme of Escherichia coli. III. Distinctive processive polymerases reconstituted from purified subunits
-
Maki, S., and A. Kornberg. 1988. DNA polymerase III holoenzyme of Escherichia coli. III. Distinctive processive polymerases reconstituted from purified subunits. J. Biol. Chem. 263:6561-6569.
-
(1988)
J. Biol. Chem
, vol.263
, pp. 6561-6569
-
-
Maki, S.1
Kornberg, A.2
-
27
-
-
0033741783
-
SOS mutator activity: Unequal mutagenesis on leading and lagging strands
-
Maliszewska-Tkaczyk, M., P. Jonczyk, M. Bialoskorska, R. M. Schaaper, and I. J. Fijalkowska. 2000. SOS mutator activity: unequal mutagenesis on leading and lagging strands. Proc. Natl. Acad. Sci. USA 97:12678-12683.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 12678-12683
-
-
Maliszewska-Tkaczyk, M.1
Jonczyk, P.2
Bialoskorska, M.3
Schaaper, R.M.4
Fijalkowska, I.J.5
-
28
-
-
0037016026
-
Analysis of the stimulation of DNA polymerase V of Escherichia coli by processivity proteins
-
Maor-Shoshani, A., and Z. Livneh. 2002. Analysis of the stimulation of DNA polymerase V of Escherichia coli by processivity proteins. Biochemistry 41:14438-14446.
-
(2002)
Biochemistry
, vol.41
, pp. 14438-14446
-
-
Maor-Shoshani, A.1
Livneh, Z.2
-
29
-
-
27744446311
-
Roles of the Escherichia coli RecA protein and the global SOS response in effecting DNA polymerase selection in vivo
-
Maul, R. W., and M. D. Sutton. 2005. Roles of the Escherichia coli RecA protein and the global SOS response in effecting DNA polymerase selection in vivo. J. Bacteriol. 187:7607-7618.
-
(2005)
J. Bacteriol
, vol.187
, pp. 7607-7618
-
-
Maul, R.W.1
Sutton, M.D.2
-
31
-
-
0015184718
-
Slow joining of newly replicated DNA chains in DNA polymerase I-deficient Escherichia coli mutants
-
Okazaki, R., M. Arisawa, and A. Sugino. 1971. Slow joining of newly replicated DNA chains in DNA polymerase I-deficient Escherichia coli mutants. Proc. Natl. Acad. Sci. USA 68:2954-2957.
-
(1971)
Proc. Natl. Acad. Sci. USA
, vol.68
, pp. 2954-2957
-
-
Okazaki, R.1
Arisawa, M.2
Sugino, A.3
-
32
-
-
0021034177
-
Cloning and deletion mapping of the recF dnaN region of the Escherichia coli chromosome
-
Ream, L. W., and A. J. Clark. 1983. Cloning and deletion mapping of the recF dnaN region of the Escherichia coli chromosome. Plasmid 10:101-110.
-
(1983)
Plasmid
, vol.10
, pp. 101-110
-
-
Ream, L.W.1
Clark, A.J.2
-
33
-
-
0019129952
-
Genetic and physical mapping of recF in Escherichia coli K-12
-
Ream, L. W., L. Margossian, A. J. Clark, F. G. Hansen, and K. von Meyenburg. 1980. Genetic and physical mapping of recF in Escherichia coli K-12. Mol. Gen. Genet. 180:115-121.
-
(1980)
Mol. Gen. Genet
, vol.180
, pp. 115-121
-
-
Ream, L.W.1
Margossian, L.2
Clark, A.J.3
Hansen, F.G.4
von Meyenburg, K.5
-
34
-
-
33750343789
-
-
Richardson, C. C., R. B. Inman, and A. Kornberg. 1964. Enzymic synthesis of deoxyribonucleic acid. 18. The repair of partially single-stranded DNA templates by DNA polymerase. J. Mol. Biol. 116:46-69.
-
Richardson, C. C., R. B. Inman, and A. Kornberg. 1964. Enzymic synthesis of deoxyribonucleic acid. 18. The repair of partially single-stranded DNA templates by DNA polymerase. J. Mol. Biol. 116:46-69.
-
-
-
-
35
-
-
0018940686
-
A temperature-sensitive Escherichia coli mutant defective in DNA replication: DnaN, a new gene adjacent to the dnaA gene
-
Sakakibara, Y., and T. Mizukami. 1980. A temperature-sensitive Escherichia coli mutant defective in DNA replication: dnaN, a new gene adjacent to the dnaA gene. Mol. Gen. Genet. 178:541-553.
-
(1980)
Mol. Gen. Genet
, vol.178
, pp. 541-553
-
-
Sakakibara, Y.1
Mizukami, T.2
-
36
-
-
0004136246
-
-
2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
-
(1989)
Molecular cloning: A laboratory manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
37
-
-
0023430552
-
Role of DNA polymerase I in postreplication repair: A reexamination with Escherichia coli ΔpolA
-
Sharma, R. C., and K. C. Smith. 1987. Role of DNA polymerase I in postreplication repair: a reexamination with Escherichia coli ΔpolA. J. Bacteriol. 169:4559-4564.
-
(1987)
J. Bacteriol
, vol.169
, pp. 4559-4564
-
-
Sharma, R.C.1
Smith, K.C.2
-
38
-
-
4944228029
-
The Escherichia coli dnaN159 mutant displays altered DNA polymerase usage and chronic SOS induction
-
Sutton, M. D. 2004. The Escherichia coli dnaN159 mutant displays altered DNA polymerase usage and chronic SOS induction. J. Bacteriol. 186:6738-6748.
-
(2004)
J. Bacteriol
, vol.186
, pp. 6738-6748
-
-
Sutton, M.D.1
-
39
-
-
32644456505
-
Specific amino acid residues in the beta sliding clamp establish a DNA polymerase usage hierarchy in Escherichia coli
-
Sutton, M. D., and J. M. Duzen. 2006. Specific amino acid residues in the beta sliding clamp establish a DNA polymerase usage hierarchy in Escherichia coli. DNA Repair 5:312-323.
-
(2006)
DNA Repair
, vol.5
, pp. 312-323
-
-
Sutton, M.D.1
Duzen, J.M.2
-
40
-
-
15944400711
-
Mutant forms of the Escherichia coli β sliding clamp that distinguish between its roles in replication and DNA polymerase V-dependent translesion DNA synthesis
-
Sutton, M. D., J. M. Duzen, and R. W. Maul. 2005. Mutant forms of the Escherichia coli β sliding clamp that distinguish between its roles in replication and DNA polymerase V-dependent translesion DNA synthesis. Mol. Microbiol. 55:1751-1766.
-
(2005)
Mol. Microbiol
, vol.55
, pp. 1751-1766
-
-
Sutton, M.D.1
Duzen, J.M.2
Maul, R.W.3
-
41
-
-
0035045440
-
Genetic interactions between the Escherichia coli umuDC gene products and the beta processivity clamp of the replicative DNA polymerase
-
Sutton, M. D., M. F. Farrow, B. M. Burton, and G. C. Walker. 2001. Genetic interactions between the Escherichia coli umuDC gene products and the beta processivity clamp of the replicative DNA polymerase. J. Bacteriol. 183:2897-2909.
-
(2001)
J. Bacteriol
, vol.183
, pp. 2897-2909
-
-
Sutton, M.D.1
Farrow, M.F.2
Burton, B.M.3
Walker, G.C.4
-
42
-
-
0034720286
-
Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis
-
Tang, M., P. Pham, X. Shen, J. S. Taylor, M. O'Donnell, R. Woodgate, and M. F. Goodman. 2000. Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis. Nature 404:1014-1018.
-
(2000)
Nature
, vol.404
, pp. 1014-1018
-
-
Tang, M.1
Pham, P.2
Shen, X.3
Taylor, J.S.4
O'Donnell, M.5
Woodgate, R.6
Goodman, M.F.7
-
43
-
-
0034574554
-
The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity
-
Wagner, J., S. Fujii, P. Gruz, T. Nohmi, and R. P. Fuchs. 2000. The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity. EMBO Rep. 1:484-488.
-
(2000)
EMBO Rep
, vol.1
, pp. 484-488
-
-
Wagner, J.1
Fujii, S.2
Gruz, P.3
Nohmi, T.4
Fuchs, R.P.5
-
44
-
-
0025782890
-
Construction of versatile low-copy-number vectors for cloning, sequencing and gene expression in Escherichia coli
-
Wang, R. F., and S. R. Kushner. 1991. Construction of versatile low-copy-number vectors for cloning, sequencing and gene expression in Escherichia coli. Gene 100:195-199.
-
(1991)
Gene
, vol.100
, pp. 195-199
-
-
Wang, R.F.1
Kushner, S.R.2
|