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Volumn 189, Issue 13, 2007, Pages 4688-4695

Role of Escherichia coli DNA polymerase I in conferring viability upon the dnaN159 mutant strain

Author keywords

[No Author keywords available]

Indexed keywords

DNA DIRECTED DNA POLYMERASE BETA; SINGLE STRANDED DNA;

EID: 34347382975     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.00476-07     Document Type: Article
Times cited : (14)

References (44)
  • 2
    • 0024502968 scopus 로고
    • Spontaneous and UV-induced mutations in Escherichia coli K-12 strains with altered or absent DNA polymerase I
    • Bates, H., S. K. Randall, C. Rayssiguier, B. A. Bridges, M. F. Goodman, and M. Radman. 1989. Spontaneous and UV-induced mutations in Escherichia coli K-12 strains with altered or absent DNA polymerase I. J. Bacteriol. 171:2480-2484.
    • (1989) J. Bacteriol , vol.171 , pp. 2480-2484
    • Bates, H.1    Randall, S.K.2    Rayssiguier, C.3    Bridges, B.A.4    Goodman, M.F.5    Radman, M.6
  • 3
    • 0025160871 scopus 로고
    • The fidelity of DNA synthesis catalyzed by derivatives of Escherichia coli DNA polymerase I
    • Bebenek, K., C. M. Joyce, M. P. Fitzgerald, and T. A. Kunkel. 1990. The fidelity of DNA synthesis catalyzed by derivatives of Escherichia coli DNA polymerase I. J. Biol. Chem. 265:13878-13887.
    • (1990) J. Biol. Chem , vol.265 , pp. 13878-13887
    • Bebenek, K.1    Joyce, C.M.2    Fitzgerald, M.P.3    Kunkel, T.A.4
  • 4
    • 0037019606 scopus 로고    scopus 로고
    • Pivotal role of the beta-clamp in translesion DNA synthesis and mutagenesis in E. coli cells
    • Becherel, O. J., R. P. Fuchs, and J. Wagner. 2002. Pivotal role of the beta-clamp in translesion DNA synthesis and mutagenesis in E. coli cells. DNA Repair 1:703-708.
    • (2002) DNA Repair , vol.1 , pp. 703-708
    • Becherel, O.J.1    Fuchs, R.P.2    Wagner, J.3
  • 5
    • 33745071496 scopus 로고    scopus 로고
    • Dynamics of loading the Escherichia coli DNA polymerase processivity clamp
    • Bloom, L. B. 2006. Dynamics of loading the Escherichia coli DNA polymerase processivity clamp. Crit. Rev. Biochem. Mol. Biol. 41:179-208.
    • (2006) Crit. Rev. Biochem. Mol. Biol , vol.41 , pp. 179-208
    • Bloom, L.B.1
  • 6
    • 0026725774 scopus 로고    scopus 로고
    • Bonner, C. A., P. T. Stukenberg, M. Rajagopalan, R. F.ritja, M. O'Donnell, K. McEntee, H. Echols, and M. F. Goodman. 1992. Processive DNA synthesis by DNA polymerase II mediated by DNA polymerase III accessory proteins. J. Biol. Chem. 267:11431-11438.
    • Bonner, C. A., P. T. Stukenberg, M. Rajagopalan, R. F.ritja, M. O'Donnell, K. McEntee, H. Echols, and M. F. Goodman. 1992. Processive DNA synthesis by DNA polymerase II mediated by DNA polymerase III accessory proteins. J. Biol. Chem. 267:11431-11438.
  • 7
    • 77955094232 scopus 로고
    • The dnaN gene codes for the beta subunit of DNA polymerase III holoenzyme of Escherichia coli
    • Burgers, P. M., A. Kornberg, and Y. Sakakibara. 1981. The dnaN gene codes for the beta subunit of DNA polymerase III holoenzyme of Escherichia coli. Proc. Natl. Acad. Sci. USA 78:5391-5395.
    • (1981) Proc. Natl. Acad. Sci. USA , vol.78 , pp. 5391-5395
    • Burgers, P.M.1    Kornberg, A.2    Sakakibara, Y.3
  • 8
    • 0035949599 scopus 로고    scopus 로고
    • A universal protein-protein interaction motif in the cubacterial DNA replication and repair systems
    • Dalrymple, B. P., K. Kongsuwan, G. Wijffels, N. E. Dixon, and P. A. Jennings. 2001. A universal protein-protein interaction motif in the cubacterial DNA replication and repair systems. Proc. Natl. Acad. Sci. USA 98:11627-11632.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 11627-11632
    • Dalrymple, B.P.1    Kongsuwan, K.2    Wijffels, G.3    Dixon, N.E.4    Jennings, P.A.5
  • 9
    • 0842281648 scopus 로고    scopus 로고
    • Identification of specific amino acid residues in the E. coli beta processivity clamp involved in interactions with DNA polymerase III, UmuD and UmuD
    • Duzen, J. M., G. C. Walker, and M. D. Sutton. 2004. Identification of specific amino acid residues in the E. coli beta processivity clamp involved in interactions with DNA polymerase III, UmuD and UmuD'. DNA Repair 3:301-312.
    • (2004) DNA Repair , vol.3 , pp. 301-312
    • Duzen, J.M.1    Walker, G.C.2    Sutton, M.D.3
  • 10
    • 0032543992 scopus 로고    scopus 로고
    • Unequal fidelity of leading strand and lagging strand DNA replication on the Escherichia coli chromosome
    • Fijalkowska, I. J., P. Jonczyk, M. M. Tkaczyk, M. Bialoskorska, and R. M. Schaaper. 1998. Unequal fidelity of leading strand and lagging strand DNA replication on the Escherichia coli chromosome. Proc. Natl. Acad. Sci. USA 95:10020-10025.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 10020-10025
    • Fijalkowska, I.J.1    Jonczyk, P.2    Tkaczyk, M.M.3    Bialoskorska, M.4    Schaaper, R.M.5
  • 14
    • 0036015646 scopus 로고    scopus 로고
    • Replication fork reversal in DNA polymerase III mutants of Escherichia coli: A role for the beta clamp
    • Grompone, G., M. Seigneur, S. D. Ehrlich, and B. Michel. 2002. Replication fork reversal in DNA polymerase III mutants of Escherichia coli: a role for the beta clamp. Mol. Microbiol. 44:1331-1339.
    • (2002) Mol. Microbiol , vol.44 , pp. 1331-1339
    • Grompone, G.1    Seigneur, M.2    Ehrlich, S.D.3    Michel, B.4
  • 15
    • 0027194501 scopus 로고
    • A rapid method for cloning mutagenic DNA repair genes: Isolation of umu-complementing genes from multidrug resistance plasmids R391, R446b, and R471a
    • Ho, C., O. I. Kulaeva, A. S. Levine, and R. Woodgate. 1993. A rapid method for cloning mutagenic DNA repair genes: isolation of umu-complementing genes from multidrug resistance plasmids R391, R446b, and R471a. J. Bacteriol. 175:5411-5419.
    • (1993) J. Bacteriol , vol.175 , pp. 5411-5419
    • Ho, C.1    Kulaeva, O.I.2    Levine, A.S.3    Woodgate, R.4
  • 16
    • 0018150267 scopus 로고
    • Reduction of postreplication DNA repair in two Escherichia coli mutants with temperature-sensitive polymerase III activity: Implications for the postreplication repair pathway
    • Johnson, R. C. 1978. Reduction of postreplication DNA repair in two Escherichia coli mutants with temperature-sensitive polymerase III activity: implications for the postreplication repair pathway. J. Bacteriol. 136:125-130.
    • (1978) J. Bacteriol , vol.136 , pp. 125-130
    • Johnson, R.C.1
  • 17
    • 0001464258 scopus 로고
    • Construction of a plasmid that overproduces the large proteolytic fragment (Klenow fragment) of DNA polymerase I of Escherichia coli
    • Joyce, C. M., and N. D. Grindley. 1983. Construction of a plasmid that overproduces the large proteolytic fragment (Klenow fragment) of DNA polymerase I of Escherichia coli. Proc. Natl. Acad. Sci. USA 80:1830-1834.
    • (1983) Proc. Natl. Acad. Sci. USA , vol.80 , pp. 1830-1834
    • Joyce, C.M.1    Grindley, N.D.2
  • 18
    • 0021368076 scopus 로고
    • Method for determining whether a gene of Escherichia coli is essential: Application to the polA gene
    • Joyce, C. M., and N. D. Grindley. 1984. Method for determining whether a gene of Escherichia coli is essential: application to the polA gene. J. Bacteriol. 158:636-643.
    • (1984) J. Bacteriol , vol.158 , pp. 636-643
    • Joyce, C.M.1    Grindley, N.D.2
  • 19
    • 0000210315 scopus 로고    scopus 로고
    • Identification of the beta-binding domain of the alpha subunit of Escherichia coli polymerase III holoenzyme
    • Kim, D. R., and C. S. McHenry. 1996. Identification of the beta-binding domain of the alpha subunit of Escherichia coli polymerase III holoenzyme. J. Biol. Chem. 271:20699-20704.
    • (1996) J. Biol. Chem , vol.271 , pp. 20699-20704
    • Kim, D.R.1    McHenry, C.S.2
  • 20
    • 0021962878 scopus 로고
    • Genetic recombination of bacterial plasmid DNA: Effect of RecF pathway mutations on plasmid recombination in Escherichia coli
    • Kolodner, R., R. A Fishel, and M. Howard. 1985. Genetic recombination of bacterial plasmid DNA: effect of RecF pathway mutations on plasmid recombination in Escherichia coli. J. Bacteriol. 163:1060-1066.
    • (1985) J. Bacteriol , vol.163 , pp. 1060-1066
    • Kolodner, R.1    Fishel, R.A.2    Howard, M.3
  • 22
    • 0032715175 scopus 로고    scopus 로고
    • Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda
    • Kuzminov, A. 1999. Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda. Microbiol. Mol. Biol. Rev. 63:751-813.
    • (1999) Microbiol. Mol. Biol. Rev , vol.63 , pp. 751-813
    • Kuzminov, A.1
  • 23
    • 33744932976 scopus 로고    scopus 로고
    • The beta sliding clamp binds to multiple sites within MutL and MutS
    • Lopez de Saro, F. J., M. G. Marinus, P. Modrich, and M. O'Donnell. 2006. The beta sliding clamp binds to multiple sites within MutL and MutS. J. Biol. Chem. 281:14340-14349.
    • (2006) J. Biol. Chem , vol.281 , pp. 14340-14349
    • Lopez de Saro, F.J.1    Marinus, M.G.2    Modrich, P.3    O'Donnell, M.4
  • 24
    • 0035902496 scopus 로고    scopus 로고
    • Interaction of the beta sliding clamp with MutS, ligase, and DNA polymerase I
    • Lopez de Saro, F. J., and M. O'Donnell. 2001. Interaction of the beta sliding clamp with MutS, ligase, and DNA polymerase I. Proc. Natl. Acad. Sci. USA 98:8376-8380.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 8376-8380
    • Lopez de Saro, F.J.1    O'Donnell, M.2
  • 25
    • 0024655588 scopus 로고
    • Identification of the recR locus of Escherichia coli K-12 and analysis of its role in recombination and DNA repair
    • Mahdi, A. A, and R. G. Lloyd. 1989. Identification of the recR locus of Escherichia coli K-12 and analysis of its role in recombination and DNA repair. Mol. Gen. Genet. 216:503-510.
    • (1989) Mol. Gen. Genet , vol.216 , pp. 503-510
    • Mahdi, A.A.1    Lloyd, R.G.2
  • 26
    • 0023952130 scopus 로고
    • DNA polymerase III holoenzyme of Escherichia coli. III. Distinctive processive polymerases reconstituted from purified subunits
    • Maki, S., and A. Kornberg. 1988. DNA polymerase III holoenzyme of Escherichia coli. III. Distinctive processive polymerases reconstituted from purified subunits. J. Biol. Chem. 263:6561-6569.
    • (1988) J. Biol. Chem , vol.263 , pp. 6561-6569
    • Maki, S.1    Kornberg, A.2
  • 28
    • 0037016026 scopus 로고    scopus 로고
    • Analysis of the stimulation of DNA polymerase V of Escherichia coli by processivity proteins
    • Maor-Shoshani, A., and Z. Livneh. 2002. Analysis of the stimulation of DNA polymerase V of Escherichia coli by processivity proteins. Biochemistry 41:14438-14446.
    • (2002) Biochemistry , vol.41 , pp. 14438-14446
    • Maor-Shoshani, A.1    Livneh, Z.2
  • 29
    • 27744446311 scopus 로고    scopus 로고
    • Roles of the Escherichia coli RecA protein and the global SOS response in effecting DNA polymerase selection in vivo
    • Maul, R. W., and M. D. Sutton. 2005. Roles of the Escherichia coli RecA protein and the global SOS response in effecting DNA polymerase selection in vivo. J. Bacteriol. 187:7607-7618.
    • (2005) J. Bacteriol , vol.187 , pp. 7607-7618
    • Maul, R.W.1    Sutton, M.D.2
  • 31
    • 0015184718 scopus 로고
    • Slow joining of newly replicated DNA chains in DNA polymerase I-deficient Escherichia coli mutants
    • Okazaki, R., M. Arisawa, and A. Sugino. 1971. Slow joining of newly replicated DNA chains in DNA polymerase I-deficient Escherichia coli mutants. Proc. Natl. Acad. Sci. USA 68:2954-2957.
    • (1971) Proc. Natl. Acad. Sci. USA , vol.68 , pp. 2954-2957
    • Okazaki, R.1    Arisawa, M.2    Sugino, A.3
  • 32
    • 0021034177 scopus 로고
    • Cloning and deletion mapping of the recF dnaN region of the Escherichia coli chromosome
    • Ream, L. W., and A. J. Clark. 1983. Cloning and deletion mapping of the recF dnaN region of the Escherichia coli chromosome. Plasmid 10:101-110.
    • (1983) Plasmid , vol.10 , pp. 101-110
    • Ream, L.W.1    Clark, A.J.2
  • 34
    • 33750343789 scopus 로고    scopus 로고
    • Richardson, C. C., R. B. Inman, and A. Kornberg. 1964. Enzymic synthesis of deoxyribonucleic acid. 18. The repair of partially single-stranded DNA templates by DNA polymerase. J. Mol. Biol. 116:46-69.
    • Richardson, C. C., R. B. Inman, and A. Kornberg. 1964. Enzymic synthesis of deoxyribonucleic acid. 18. The repair of partially single-stranded DNA templates by DNA polymerase. J. Mol. Biol. 116:46-69.
  • 35
    • 0018940686 scopus 로고
    • A temperature-sensitive Escherichia coli mutant defective in DNA replication: DnaN, a new gene adjacent to the dnaA gene
    • Sakakibara, Y., and T. Mizukami. 1980. A temperature-sensitive Escherichia coli mutant defective in DNA replication: dnaN, a new gene adjacent to the dnaA gene. Mol. Gen. Genet. 178:541-553.
    • (1980) Mol. Gen. Genet , vol.178 , pp. 541-553
    • Sakakibara, Y.1    Mizukami, T.2
  • 37
    • 0023430552 scopus 로고
    • Role of DNA polymerase I in postreplication repair: A reexamination with Escherichia coli ΔpolA
    • Sharma, R. C., and K. C. Smith. 1987. Role of DNA polymerase I in postreplication repair: a reexamination with Escherichia coli ΔpolA. J. Bacteriol. 169:4559-4564.
    • (1987) J. Bacteriol , vol.169 , pp. 4559-4564
    • Sharma, R.C.1    Smith, K.C.2
  • 38
    • 4944228029 scopus 로고    scopus 로고
    • The Escherichia coli dnaN159 mutant displays altered DNA polymerase usage and chronic SOS induction
    • Sutton, M. D. 2004. The Escherichia coli dnaN159 mutant displays altered DNA polymerase usage and chronic SOS induction. J. Bacteriol. 186:6738-6748.
    • (2004) J. Bacteriol , vol.186 , pp. 6738-6748
    • Sutton, M.D.1
  • 39
    • 32644456505 scopus 로고    scopus 로고
    • Specific amino acid residues in the beta sliding clamp establish a DNA polymerase usage hierarchy in Escherichia coli
    • Sutton, M. D., and J. M. Duzen. 2006. Specific amino acid residues in the beta sliding clamp establish a DNA polymerase usage hierarchy in Escherichia coli. DNA Repair 5:312-323.
    • (2006) DNA Repair , vol.5 , pp. 312-323
    • Sutton, M.D.1    Duzen, J.M.2
  • 40
    • 15944400711 scopus 로고    scopus 로고
    • Mutant forms of the Escherichia coli β sliding clamp that distinguish between its roles in replication and DNA polymerase V-dependent translesion DNA synthesis
    • Sutton, M. D., J. M. Duzen, and R. W. Maul. 2005. Mutant forms of the Escherichia coli β sliding clamp that distinguish between its roles in replication and DNA polymerase V-dependent translesion DNA synthesis. Mol. Microbiol. 55:1751-1766.
    • (2005) Mol. Microbiol , vol.55 , pp. 1751-1766
    • Sutton, M.D.1    Duzen, J.M.2    Maul, R.W.3
  • 41
    • 0035045440 scopus 로고    scopus 로고
    • Genetic interactions between the Escherichia coli umuDC gene products and the beta processivity clamp of the replicative DNA polymerase
    • Sutton, M. D., M. F. Farrow, B. M. Burton, and G. C. Walker. 2001. Genetic interactions between the Escherichia coli umuDC gene products and the beta processivity clamp of the replicative DNA polymerase. J. Bacteriol. 183:2897-2909.
    • (2001) J. Bacteriol , vol.183 , pp. 2897-2909
    • Sutton, M.D.1    Farrow, M.F.2    Burton, B.M.3    Walker, G.C.4
  • 42
    • 0034720286 scopus 로고    scopus 로고
    • Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis
    • Tang, M., P. Pham, X. Shen, J. S. Taylor, M. O'Donnell, R. Woodgate, and M. F. Goodman. 2000. Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis. Nature 404:1014-1018.
    • (2000) Nature , vol.404 , pp. 1014-1018
    • Tang, M.1    Pham, P.2    Shen, X.3    Taylor, J.S.4    O'Donnell, M.5    Woodgate, R.6    Goodman, M.F.7
  • 43
    • 0034574554 scopus 로고    scopus 로고
    • The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity
    • Wagner, J., S. Fujii, P. Gruz, T. Nohmi, and R. P. Fuchs. 2000. The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity. EMBO Rep. 1:484-488.
    • (2000) EMBO Rep , vol.1 , pp. 484-488
    • Wagner, J.1    Fujii, S.2    Gruz, P.3    Nohmi, T.4    Fuchs, R.P.5
  • 44
    • 0025782890 scopus 로고
    • Construction of versatile low-copy-number vectors for cloning, sequencing and gene expression in Escherichia coli
    • Wang, R. F., and S. R. Kushner. 1991. Construction of versatile low-copy-number vectors for cloning, sequencing and gene expression in Escherichia coli. Gene 100:195-199.
    • (1991) Gene , vol.100 , pp. 195-199
    • Wang, R.F.1    Kushner, S.R.2


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