Structural basis for the selection of glycosylated substrates by SCF Fbs1 ubiquitin ligase

Proceedings of the National Academy of Sciences of the United States of America

Volumn 104, Issue 14, 2007, Pages 5777-5781

  Mizushima, Tsunehiro ^a,b   Yoshida, Yukiko ^c   Kumanomidou, Taichi ^a   Hasegawa, Yuko ^a   Suzuki, Atsuo ^a   Yamane, Takashi ^a   Tanaka, Keiji ^c  

^a NAGOYA UNIVERSITY   (Japan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^c TOKYO METROPOLITAN INSTITUTE OF MEDICAL SCIENCE   (Japan)

Author keywords

Glycoprotein; Tertiary structure; Ubiquitin system

Indexed keywords

CARBOHYDRATE DERIVATIVE; F BOX PROTEIN; GLYCOPROTEIN; LYSINE; MANNOSE; OLIGOSACCHARIDE; PROTEIN FBS1; PROTEIN FBX2; PROTEIN SKP1; UBIQUITIN LIGASE SCF; UBIQUITIN PROTEIN LIGASE; UNCLASSIFIED DRUG; RIBONUCLEASE;

ARTICLE; COMPLEX FORMATION; ENDOPLASMIC RETICULUM; ENZYME ACTIVITY; ENZYME GLYCOSYLATION; ENZYME SPECIFICITY; PRIORITY JOURNAL; PROTEIN DEGRADATION; PROTEIN DOMAIN; UBIQUITINATION; AMINO ACID SEQUENCE; ANIMAL; BINDING SITE; CARBOHYDRATE ANALYSIS; CHEMICAL MODEL; CHEMICAL STRUCTURE; CHEMISTRY; CONFORMATION; ELECTRICITY; ENZYMOLOGY; ESCHERICHIA COLI; GENETICS; GLYCOSYLATION; HUMAN; HYDROGEN BOND; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; PROTEIN BINDING; PROTEIN SECONDARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; X RAY CRYSTALLOGRAPHY;

AMINO ACID SEQUENCE; ANIMALS; BINDING SITES; CARBOHYDRATE CONFORMATION; CARBOHYDRATE SEQUENCE; CRYSTALLOGRAPHY, X-RAY; ELECTROSTATICS; ENDOPLASMIC RETICULUM; ESCHERICHIA COLI; GLYCOPROTEINS; GLYCOSYLATION; HUMANS; HYDROGEN BONDING; MANNOSE; MODELS, CHEMICAL; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; OLIGOSACCHARIDES; PROTEIN BINDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; RIBONUCLEASES; SKP CULLIN F-BOX PROTEIN LIGASES; SUBSTRATE SPECIFICITY;

EID: 34347244940     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0610312104     Document Type: Article

References (32)

1. Hershko A, Ciechanover A, Varshavsky A (2000) Nat Med 6:1073-1081.
2. Sherman MY, Goldberg AL (2001) Neuron 29:15-32.
3. Pickart CM (2001) Annu Rev Biochem 70:503-533.
4. Deshaies RJ (1999) Annu Rev Cell Dev Biol 15:435-467.
5. Jin J, Cardozo T, Lovering RC, Elledge SJ, Pagano M, Harper JW (2004) Genes Dev 18:2573-2580.
6. Yoshida Y (2003) J Biochem (Tokyo) 134:183-190.
7. Wu G, Xu G, Schulman BA, Jeffrey PD, Harper JW, Pavletich NP (2003) Mol Cell 11:1445-1456.
8. Orlicky S, Tang X, Willems A, Tyers M, Sicheri F (2003) Cell 112:243-256.
9. Schulman BA, Carrano AC, Jeffrey PD, Bowen Z, Kinnucan ER, Finnin MS, Elledge SJ, Harper JW, Pagano M, Pavletich NP (2000) Nature 408:381-386.
10. Zheng N, Schulman BA, Song L, Miller JJ, Jeffrey PD, Wang P, Chu C, Koepp DM, Elledge SJ, Pagano M, et al. (2002) Nature 416:703-709.
11. Hao B, Zheng N, Schulman BA, Wu G, Miller JJ, Pagano M, Pavletich NP (2005) Mol Cell 20:9-19.
12. Ellgaard L, Helenius A (2003) Nat Rev Mol Cell Biol 4:181-191.
13. Erhardt JA, Hynicka W, DiBenedetto A, Shen N, Stone N, Paulson H, Pittman RN (1998) J Biol Chem 273:35222-35227.
14. Yoshida Y, Chiba T, Tokunaga F, Kawasaki H, Iwai K, Suzuki T, Ito Y, Matsuoka K, Yoshida M, Tanaka K, et al. (2002) Nature 418:438-442.
15. Yoshida Y, Tokunaga F, Chiba T, Iwai K, Tanaka K, Tai T (2003) J Biol Chem 278:43877-43884.
16. Yoshida Y, Adachi E, Fukiya K, Iwai K, Tanaka K (2005) EMBO Rep 6:239-244.
17. Mizushima T, Hirao T, Yoshida Y, Lee SJ, Chiba T, Iwai K, Yamaguchi Y, Kato K, Tsukihara T, Tanaka K (2004) Nat Struct Mol Biol 11:365-370.
18. Aravind L, Koonin EV (1999) J Mol Biol 285:1353-1361.
19. Liang CJ, Yamashita K, Kobata A (1980) J Biochem (Tokyo) 88:51-58.
20. Williams RL, Greene SM, McPherson A (1987) J Biol Chem 262:16020-16031.
21. Ko TP, Williams R, McPherson A (1996) Acta Crystallogr D 52:160-164.
22. Hagihara S, Totani K, Matsuo I, Ito Y (2005) J Med Chem 48:3126-3129.
23. Zheng N, Wang P, Jeffrey PD, Pavletich NP (2000) Cell 102:533-539.
24. Otwinowski Z, Minor W (1997) Methods Enzymol 276:307-326.
25. Bricogne G, Vonrhein C, Flensburg C, Schiltz M, Paciorek W (2003) Acta Crystallogr D 59:2023-2030.
26. Collaborative Computational Project 4 (1994) Acta Crystallogr D 50:760-763.
27. Vagin AA, Teplyakov A (1997) J Appl Crystallogr 30:1022-1025.
28. Emsley P, Cowtan K (2004) Acta Crystallogr D 60:2126-2132.
29. Murshudov GN, Vagin AA, Dodson EJ (1997) Acta Crystallogr D 53:240-255.
30. Kraulis PJ (1991) J Appl Crystallogr 24:946-950.
31. Merritt EA, Murphy ME (1994) Acta Crystallogr D 50:869-873.
32. Potterton E, McNicholas S, Krissinel E, Cowtan K, Noble M (2002) Acta Crystallogr D 58:1955-1957.