메뉴 건너뛰기




Volumn 73, Issue 12, 2007, Pages 3975-3983

Diversity and function of Chloroflexus-like bacteria in a hypersaline microbial mat: Phylogenetic characterization and impact on aerobic respiration

Author keywords

[No Author keywords available]

Indexed keywords

BIODIVERSITY; ECOSYSTEMS; GENES; INFRARED ABSORPTION; METABOLISM; MICROSENSORS; PHOTOSYNTHESIS; RNA;

EID: 34250868973     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.02532-06     Document Type: Article
Times cited : (26)

References (35)
  • 1
    • 0035194375 scopus 로고    scopus 로고
    • Long-term compositional changes after transplant in a microbial mat cyanobacterial community revealed using a polyphasic approach
    • Abed, R. M. M., and F. Garcia-Pichel. 2001. Long-term compositional changes after transplant in a microbial mat cyanobacterial community revealed using a polyphasic approach. Environ. Microbiol. 3:53-62.
    • (2001) Environ. Microbiol , vol.3 , pp. 53-62
    • Abed, R.M.M.1    Garcia-Pichel, F.2
  • 2
    • 0000651747 scopus 로고
    • Photoexcretion and fate of glycolate in a hot-spring cyanobacterial mat
    • Bateson, M. M., and D. M. Ward. 1988. Photoexcretion and fate of glycolate in a hot-spring cyanobacterial mat. Appl. Environ. Microbiol. 54:1738-1743.
    • (1988) Appl. Environ. Microbiol , vol.54 , pp. 1738-1743
    • Bateson, M.M.1    Ward, D.M.2
  • 3
    • 0036667419 scopus 로고    scopus 로고
    • Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal
    • Bjornsson, L., P. Hugenholtz, G. W. Tyson, and L. L. Blackall. 2002. Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal. Microbiology 149: 2309-2318.
    • (2002) Microbiology , vol.149 , pp. 2309-2318
    • Bjornsson, L.1    Hugenholtz, P.2    Tyson, G.W.3    Blackall, L.L.4
  • 4
    • 0036135810 scopus 로고    scopus 로고
    • Molecular characterization of novel red green nonsulfur bacteria from five distinct hot spring communities in Yellowstone National Park
    • Boomer, S. M., D. P. Lodge, B. E. Dutton, and B. Pierson. 2002. Molecular characterization of novel red green nonsulfur bacteria from five distinct hot spring communities in Yellowstone National Park. Appl. Environ. Microbiol. 68:346-355.
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 346-355
    • Boomer, S.M.1    Lodge, D.P.2    Dutton, B.E.3    Pierson, B.4
  • 5
    • 0035814249 scopus 로고    scopus 로고
    • Artificial cold-adapted microbial mats cultured from Antarctic lake samples. 1. Formation and structure
    • Buffan-Dubau, E., O. Pringault, and R. DeWit. 2001. Artificial cold-adapted microbial mats cultured from Antarctic lake samples. 1. Formation and structure. Aquat. Microb. Ecol. 26:115-125.
    • (2001) Aquat. Microb. Ecol , vol.26 , pp. 115-125
    • Buffan-Dubau, E.1    Pringault, O.2    DeWit, R.3
  • 6
    • 0023222254 scopus 로고
    • Association of a new type of gliding, filamentous, purple phototrophic bacterium inside bundles of Microcoleus chthonoplastes in hypersaline microbial mats
    • D'Amelio, E. D., Y. Cohen, and D. J. DesMarais. 1987. Association of a new type of gliding, filamentous, purple phototrophic bacterium inside bundles of Microcoleus chthonoplastes in hypersaline microbial mats. Arch. Microbiol. 147:213-220.
    • (1987) Arch. Microbiol , vol.147 , pp. 213-220
    • D'Amelio, E.D.1    Cohen, Y.2    DesMarais, D.J.3
  • 7
    • 0001059433 scopus 로고
    • Chemolithotrophic growth of the phototrophic sulfur bacterium Thiocapsa roseopersicina
    • DeWit, R., and H. VanGemerden. 1987. Chemolithotrophic growth of the phototrophic sulfur bacterium Thiocapsa roseopersicina, FEMS Microbiol. Ecol. 45:117-126.
    • (1987) FEMS Microbiol. Ecol , vol.45 , pp. 117-126
    • DeWit, R.1    VanGemerden, H.2
  • 8
    • 0025166191 scopus 로고
    • Growth and metabolism of the purple sulfur bacterium Thiocapsa roseopersicina under combined light dark and oxic anoxic regimens
    • DeWit, R., and H. VanGemerden. 1990. Growth and metabolism of the purple sulfur bacterium Thiocapsa roseopersicina under combined light dark and oxic anoxic regimens. Arch. Microbiol. 154:459-464.
    • (1990) Arch. Microbiol , vol.154 , pp. 459-464
    • DeWit, R.1    VanGemerden, H.2
  • 9
    • 17644373134 scopus 로고    scopus 로고
    • Heterotrophic dinitrogen fixation (acetylene reduction) in phosphate-fertilised Microcoleus chthonoplastes microbial mat from the hypersaline inland lake "la Salada de Chiprana" (NE Spain)
    • DeWit, R., L. Falcón, and C. Charpy-Roubaud. 2005. Heterotrophic dinitrogen fixation (acetylene reduction) in phosphate-fertilised Microcoleus chthonoplastes microbial mat from the hypersaline inland lake "la Salada de Chiprana" (NE Spain). Hydrobiology 534:245-253.
    • (2005) Hydrobiology , vol.534 , pp. 245-253
    • DeWit, R.1    Falcón, L.2    Charpy-Roubaud, C.3
  • 10
    • 0032888741 scopus 로고    scopus 로고
    • Physiology, phylogenetic relationships, and ecology of filamentous sulfate-reducing bacteria (genus Desulfonema)
    • Fukui, M., A. Teske, B. Assmus, G. Muyzer, and F. Widdel. 1999. Physiology, phylogenetic relationships, and ecology of filamentous sulfate-reducing bacteria (genus Desulfonema). Arch. Microbiol. 172:193-203.
    • (1999) Arch. Microbiol , vol.172 , pp. 193-203
    • Fukui, M.1    Teske, A.2    Assmus, B.3    Muyzer, G.4    Widdel, F.5
  • 11
    • 0036135188 scopus 로고    scopus 로고
    • Previously unknown and phylogenetically diverse members of the green nonsulfur bacteria are indigenous to freshwater lakes
    • Gich, F., J. Garcia-Gil, and J. Overmann. 2001. Previously unknown and phylogenetically diverse members of the green nonsulfur bacteria are indigenous to freshwater lakes. Arch. Microbiol. 177:1-10.
    • (2001) Arch. Microbiol , vol.177 , pp. 1-10
    • Gich, F.1    Garcia-Gil, J.2    Overmann, J.3
  • 12
    • 0346364902 scopus 로고    scopus 로고
    • Characterization of the chlorosome antenna of the filamentous anoxygenic phototrophic bacterium Chloronema sp. strain UdG9001
    • Gich, F., R. L. Airs, M. Danielsen, B. J. Keely, C. A. Abella, J. Garcia-Gil, M. Miller, and C. M. Borrego. 2003. Characterization of the chlorosome antenna of the filamentous anoxygenic phototrophic bacterium Chloronema sp. strain UdG9001. Arch. Microbiol. 180:417-426.
    • (2003) Arch. Microbiol , vol.180 , pp. 417-426
    • Gich, F.1    Airs, R.L.2    Danielsen, M.3    Keely, B.J.4    Abella, C.A.5    Garcia-Gil, J.6    Miller, M.7    Borrego, C.M.8
  • 13
    • 34250846867 scopus 로고    scopus 로고
    • Hanada, S, and B. K. Pierson. November 2002, posting date. The family Chloroflexaceae. In M. Dworkin et al, ed, The prokaryotes: an evolving electronic resource for the microbiological community, 3rd ed, release 3.11. Springer-Verlag, New York, NY, Accessed 28 August 2006
    • Hanada, S., and B. K. Pierson. November 2002, posting date. The family Chloroflexaceae. In M. Dworkin et al. (ed.), The prokaryotes: an evolving electronic resource for the microbiological community, 3rd ed., release 3.11. Springer-Verlag, New York, NY. http://link.springer-ny.com/link/service /books/10125. Accessed 28 August 2006.
  • 14
    • 0037447818 scopus 로고    scopus 로고
    • Structural and functional analysis of a microbial mat ecosystem from a unique permanent hypersaline inland lake: 'La Salada de Chiprana' (NE Spain)
    • Jonkers, H. M., R. Ludwig, R. DeWit, O. Pringault, G. Muyzer, H. Niemann, N. Finke, and D. DeBeer. 2003. Structural and functional analysis of a microbial mat ecosystem from a unique permanent hypersaline inland lake: 'La Salada de Chiprana' (NE Spain). FEMS Microbiol. Ecol. 44:175-189.
    • (2003) FEMS Microbiol. Ecol , vol.44 , pp. 175-189
    • Jonkers, H.M.1    Ludwig, R.2    DeWit, R.3    Pringault, O.4    Muyzer, G.5    Niemann, H.6    Finke, N.7    DeBeer, D.8
  • 15
    • 0000517688 scopus 로고
    • Bacterial zonation, photosynthesis, and spectral light-distribution in hot-spring microbial mats of Iceland
    • Jørgensen, B. B., and D. C. Nelson. 1988. Bacterial zonation, photosynthesis, and spectral light-distribution in hot-spring microbial mats of Iceland. Microb. Ecol. 16:133-147.
    • (1988) Microb. Ecol , vol.16 , pp. 133-147
    • Jørgensen, B.B.1    Nelson, D.C.2
  • 16
    • 0742304077 scopus 로고    scopus 로고
    • Phylogenetic and physiological characterization of a filamentous anoxygenic photoautotrophic bacterium 'Candidatus Chlorothrix halophila' gen. nov., sp. nov. recovered from hypersaline microbial mats
    • Klappenbach, J. A., and B. K. Pierson. 2004. Phylogenetic and physiological characterization of a filamentous anoxygenic photoautotrophic bacterium 'Candidatus Chlorothrix halophila' gen. nov., sp. nov. recovered from hypersaline microbial mats. Arch. Microbiol. 181:17-25.
    • (2004) Arch. Microbiol , vol.181 , pp. 17-25
    • Klappenbach, J.A.1    Pierson, B.K.2
  • 20
    • 33745035918 scopus 로고    scopus 로고
    • Limitation of oxygenic photosynthesis and oxygen consumption by phosphate and organic nitrogen in a hypersaline microbial mat: A microsensor study
    • Ludwig, R., O. Pringault, R. DeWit, D. DeBeer, and H. M. Jonkers. 2006. Limitation of oxygenic photosynthesis and oxygen consumption by phosphate and organic nitrogen in a hypersaline microbial mat: a microsensor study. FEMS Microbiol. Ecol. 57:9-17.
    • (2006) FEMS Microbiol. Ecol , vol.57 , pp. 9-17
    • Ludwig, R.1    Pringault, O.2    DeWit, R.3    DeBeer, D.4    Jonkers, H.M.5
  • 21
    • 2542523843 scopus 로고    scopus 로고
    • Ludwig, W., O. Strunk, R. Westram, L. Richter, H. Meier, Yadhukumar, A. Buchner, T. Lai, S. Steppi, G. Jobb, W. Forster, I. Brettske, S. Gerber, A. W. Ginhart, O. Gross, S. Grumann, S. Hermann, R. Jost, A. Konig, T. Liss, R. Lussmann, M. May, B. Nonhoff, B. Reichel, R. Strehlow, A. Stamatakis, N. Stuckmann, A. Vilbig, M. Lenke, T. Ludwig, A. Bode, and K. H. Schleifer. 2004. ARB: a software environment for sequence data. Nucleic Acids Res. 32:1363-1371.
    • Ludwig, W., O. Strunk, R. Westram, L. Richter, H. Meier, Yadhukumar, A. Buchner, T. Lai, S. Steppi, G. Jobb, W. Forster, I. Brettske, S. Gerber, A. W. Ginhart, O. Gross, S. Grumann, S. Hermann, R. Jost, A. Konig, T. Liss, R. Lussmann, M. May, B. Nonhoff, B. Reichel, R. Strehlow, A. Stamatakis, N. Stuckmann, A. Vilbig, M. Lenke, T. Ludwig, A. Bode, and K. H. Schleifer. 2004. ARB: a software environment for sequence data. Nucleic Acids Res. 32:1363-1371.
  • 23
    • 0035462963 scopus 로고    scopus 로고
    • Diversity and distribution in hypersaline microbial mats of bacteria related to Chloroflexus spp
    • Nübel, U., M. M. Bateson, M. T. Madigan, M. Kühl, and D. M. Ward. 2001. Diversity and distribution in hypersaline microbial mats of bacteria related to Chloroflexus spp. Appl. Environ. Microbiol. 67:4365-4371.
    • (2001) Appl. Environ. Microbiol , vol.67 , pp. 4365-4371
    • Nübel, U.1    Bateson, M.M.2    Madigan, M.T.3    Kühl, M.4    Ward, D.M.5
  • 24
    • 0036727104 scopus 로고    scopus 로고
    • Microscopic examination of distribution and phenotypic properties of phylogenetically diverse Chloroflexaceae-related bacteria in hot spring microbial mats
    • Nübel, U., M. M. Bateson, V. VanDieken, A. Wieland, M. Kühl, and D. M. Ward. 2002. Microscopic examination of distribution and phenotypic properties of phylogenetically diverse Chloroflexaceae-related bacteria in hot spring microbial mats. Appl. Environ. Microbiol. 68:4593-4603.
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 4593-4603
    • Nübel, U.1    Bateson, M.M.2    VanDieken, V.3    Wieland, A.4    Kühl, M.5    Ward, D.M.6
  • 25
    • 0026780477 scopus 로고
    • Light and oxygen regulation of the synthesis of bacteriochlorophylls a and c in Chloroflexus aurantiacus
    • Oelze, J. 1992. Light and oxygen regulation of the synthesis of bacteriochlorophylls a and c in Chloroflexus aurantiacus. J. Bacteriol. 174:5021-5026.
    • (1992) J. Bacteriol , vol.174 , pp. 5021-5026
    • Oelze, J.1
  • 26
    • 0026717650 scopus 로고
    • Continuous growth and respiration of Chromatiaceae species at low oxygen concentrations
    • Overmann, J., and N. Pfennig. 1992. Continuous growth and respiration of Chromatiaceae species at low oxygen concentrations. Arch. Microbiol. 158: 59-67.
    • (1992) Arch. Microbiol , vol.158 , pp. 59-67
    • Overmann, J.1    Pfennig, N.2
  • 27
    • 34250903419 scopus 로고
    • Detection of bacteriochlorophyll containing microorganisms by infrared fluorescence photomicrography
    • Pierson, B. K., and H. M. Howard. 1972. Detection of bacteriochlorophyll containing microorganisms by infrared fluorescence photomicrography. J. Gen. Microbiol. 73:359-363.
    • (1972) J. Gen. Microbiol , vol.73 , pp. 359-363
    • Pierson, B.K.1    Howard, H.M.2
  • 28
    • 0016338442 scopus 로고
    • Studies of pigments and growth in Chloroflexus aurantiacus, a phototrophic filamentous bacterium
    • Pierson, B. K., and R. W. Castenholz. 1974. Studies of pigments and growth in Chloroflexus aurantiacus, a phototrophic filamentous bacterium. Arch. Microbiol. 100:283-305.
    • (1974) Arch. Microbiol , vol.100 , pp. 283-305
    • Pierson, B.K.1    Castenholz, R.W.2
  • 29
    • 0001994776 scopus 로고
    • Chloroflexus-like organisms from marine and hypersaline environments - distribution and diversity
    • Pierson, B. K., D. Valdez, M. Larsen, E. Morgan, and E. E. Mack. 1994. Chloroflexus-like organisms from marine and hypersaline environments - distribution and diversity. Photosynth. Res. 41:35-52.
    • (1994) Photosynth. Res , vol.41 , pp. 35-52
    • Pierson, B.K.1    Valdez, D.2    Larsen, M.3    Morgan, E.4    Mack, E.E.5
  • 30
    • 84986743687 scopus 로고
    • Primary production of microalgae in sediments measured by oxygen microprofile, H-CO-14(3)-fixation, and oxygen-exchange methods
    • Revsbech, N. P., B. B. Jørgensen, and O. Brix. 1981. Primary production of microalgae in sediments measured by oxygen microprofile, H-CO-14(3)-fixation, and oxygen-exchange methods. Limnol. Oceanogr. 26:717-730.
    • (1981) Limnol. Oceanogr , vol.26 , pp. 717-730
    • Revsbech, N.P.1    Jørgensen, B.B.2    Brix, O.3
  • 31
    • 0028003122 scopus 로고
    • Simultaneous phototrophic and chemotropic growth in the purple sulfur bacterium Thiocapsa roseopersicina M1
    • Schaub, B. E. M., and H. VanGemerden. 1994. Simultaneous phototrophic and chemotropic growth in the purple sulfur bacterium Thiocapsa roseopersicina M1. FEMS Microbiol. Ecol. 13:185-195.
    • (1994) FEMS Microbiol. Ecol , vol.13 , pp. 185-195
    • Schaub, B.E.M.1    VanGemerden, H.2
  • 32
    • 32044445998 scopus 로고    scopus 로고
    • Community composition of a hypersaline endoevaporitic microbial mat
    • Sorensen, K. B., D. E. Canfield, A. P. Teske, and A. Oren. 2005. Community composition of a hypersaline endoevaporitic microbial mat. Appl. Environ. Microbiol. 71:7352-7365.
    • (2005) Appl. Environ. Microbiol , vol.71 , pp. 7352-7365
    • Sorensen, K.B.1    Canfield, D.E.2    Teske, A.P.3    Oren, A.4
  • 33
    • 0142104395 scopus 로고    scopus 로고
    • Compound-specific isotopic fractionation patterns suggest different carbon metabolisms among Chloroflexus-like bacteria in hot-spring microbial mats
    • van der Meer, M. T. J., S. Schouten, J. S. S. Damste, J. W. DeLeeuw, and D. M. Ward. 2003. Compound-specific isotopic fractionation patterns suggest different carbon metabolisms among Chloroflexus-like bacteria in hot-spring microbial mats. Appl. Environ. Microbiol. 69:6000-6006.
    • (2003) Appl. Environ. Microbiol , vol.69 , pp. 6000-6006
    • van der Meer, M.T.J.1    Schouten, S.2    Damste, J.S.S.3    DeLeeuw, J.W.4    Ward, D.M.5
  • 35
    • 0343729319 scopus 로고    scopus 로고
    • Short-term temperature effects on oxygen and sulfide cycling in a hypersaline cyanobacterial mat (Solar Lake, Egypt)
    • Wieland, A., and M. Kühl. 2000. Short-term temperature effects on oxygen and sulfide cycling in a hypersaline cyanobacterial mat (Solar Lake, Egypt). Mar. Ecol. Prog. Ser. 196:87-102.
    • (2000) Mar. Ecol. Prog. Ser , vol.196 , pp. 87-102
    • Wieland, A.1    Kühl, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.