-
1
-
-
0028068402
-
Nomenclature of the human interferon proteins
-
Allen G., and Diaz M.O. Nomenclature of the human interferon proteins. J. Interf. Res. 14 (1994) 223-226
-
(1994)
J. Interf. Res.
, vol.14
, pp. 223-226
-
-
Allen, G.1
Diaz, M.O.2
-
2
-
-
0035404420
-
Tamarin alpha-interferon is active in mouse liver upon intramuscular gene delivery
-
Aurisicchio L., Ceccacci A., La Monica N., Palombo F., and Traboni C. Tamarin alpha-interferon is active in mouse liver upon intramuscular gene delivery. J. Gene Med. 3 (2001) 394-402
-
(2001)
J. Gene Med.
, vol.3
, pp. 394-402
-
-
Aurisicchio, L.1
Ceccacci, A.2
La Monica, N.3
Palombo, F.4
Traboni, C.5
-
3
-
-
0142059650
-
An Alu transposition model for the origin and expansion of human segmental duplications
-
Bailey J.A., Liu G., and Eichler E.E. An Alu transposition model for the origin and expansion of human segmental duplications. Am. J. Hum. Genet. 73 (2003) 823-834
-
(2003)
Am. J. Hum. Genet.
, vol.73
, pp. 823-834
-
-
Bailey, J.A.1
Liu, G.2
Eichler, E.E.3
-
4
-
-
0019830478
-
Gene conversion: some implications for immunoglobulin genes
-
Baltimore D. Gene conversion: some implications for immunoglobulin genes. Cell 24 (1981) 592-594
-
(1981)
Cell
, vol.24
, pp. 592-594
-
-
Baltimore, D.1
-
5
-
-
0029071403
-
Isolation, properties and chromosomal localization of four closely linked hamster interferon-alpha-encoding genes
-
Bluyssen H.A., Nakamura N., Vlietstra R.J., Smit E.M., Hagemeijer A., and Trapman J. Isolation, properties and chromosomal localization of four closely linked hamster interferon-alpha-encoding genes. Gene 158 (1995) 295-300
-
(1995)
Gene
, vol.158
, pp. 295-300
-
-
Bluyssen, H.A.1
Nakamura, N.2
Vlietstra, R.J.3
Smit, E.M.4
Hagemeijer, A.5
Trapman, J.6
-
6
-
-
33746190700
-
Alpha interferon potently enhances the anti-human immunodeficiency virus type 1 activity of APOBEC3G in resting primary CD4 T cells
-
Chen K., et al. Alpha interferon potently enhances the anti-human immunodeficiency virus type 1 activity of APOBEC3G in resting primary CD4 T cells. J. Virol. 80 (2006) 7645-7657
-
(2006)
J. Virol.
, vol.80
, pp. 7645-7657
-
-
Chen, K.1
-
7
-
-
0042121237
-
Multiple sequence alignment with the Clustal series of programs
-
Chenna R., et al. Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res. 31 (2003) 3497-3500
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3497-3500
-
-
Chenna, R.1
-
8
-
-
0032417696
-
Identification of genes differentially regulated by interferon alpha, beta, or gamma using oligonucleotide arrays
-
Der S.D., Zhou A., Williams B.R., and Silverman R.H. Identification of genes differentially regulated by interferon alpha, beta, or gamma using oligonucleotide arrays. Proc. Natl. Acad. Sci. U. S. A. 95 (1998) 15623-15628
-
(1998)
Proc. Natl. Acad. Sci. U. S. A.
, vol.95
, pp. 15623-15628
-
-
Der, S.D.1
Zhou, A.2
Williams, B.R.3
Silverman, R.H.4
-
9
-
-
0027980347
-
Structure of the human type-I interferon gene cluster determined from a YAC clone contig
-
Diaz M.O., et al. Structure of the human type-I interferon gene cluster determined from a YAC clone contig. Genomics 22 (1994) 540-552
-
(1994)
Genomics
, vol.22
, pp. 540-552
-
-
Diaz, M.O.1
-
10
-
-
0032826401
-
Detecting and characterizing gene conversions between multigene family members
-
Drouin G., Prat F., Ell M., and Clarke G.D. Detecting and characterizing gene conversions between multigene family members. Mol. Biol. Evol. 16 (1999) 1369-1390
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1369-1390
-
-
Drouin, G.1
Prat, F.2
Ell, M.3
Clarke, G.D.4
-
11
-
-
0001334115
-
The CHC adaptive search algorithm: how to do safe search when engaging in nontraditional genetic recombination
-
Rawlines G.J.E. (Ed), Morgan Kaufmann Publishers, San Mateo, CA
-
Eshelman L.J. The CHC adaptive search algorithm: how to do safe search when engaging in nontraditional genetic recombination. In: Rawlines G.J.E. (Ed). Foundations of Genetic Algorithms (1991), Morgan Kaufmann Publishers, San Mateo, CA 265-283
-
(1991)
Foundations of Genetic Algorithms
, pp. 265-283
-
-
Eshelman, L.J.1
-
12
-
-
0038521287
-
ISG20, a new interferon-induced RNase specific for single-stranded RNA, defines an alternative antiviral pathway against RNA genomic viruses
-
Espert L., et al. ISG20, a new interferon-induced RNase specific for single-stranded RNA, defines an alternative antiviral pathway against RNA genomic viruses. J. Biol. Chem. 278 (2003) 16151-16158
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 16151-16158
-
-
Espert, L.1
-
13
-
-
33646555810
-
Type 1 interferons and the virus-host relationship: a lesson in detente
-
Garcia-Sastre A., and Biron C.A. Type 1 interferons and the virus-host relationship: a lesson in detente. Science 312 (2006) 879-882
-
(2006)
Science
, vol.312
, pp. 879-882
-
-
Garcia-Sastre, A.1
Biron, C.A.2
-
14
-
-
0021079852
-
Concerted evolution of human interferon alpha genes
-
Gillespie D., and Carter W. Concerted evolution of human interferon alpha genes. J. Interf. Res. 3 (1983) 83-88
-
(1983)
J. Interf. Res.
, vol.3
, pp. 83-88
-
-
Gillespie, D.1
Carter, W.2
-
15
-
-
0342361063
-
Sequence-directed mutagenesis: evidence from a phylogenetic history of human alpha-interferon genes
-
Golding G.B., and Glickman B.W. Sequence-directed mutagenesis: evidence from a phylogenetic history of human alpha-interferon genes. Proc. Natl. Acad. Sci. U. S. A. 82 (1985) 8577-8581
-
(1985)
Proc. Natl. Acad. Sci. U. S. A.
, vol.82
, pp. 8577-8581
-
-
Golding, G.B.1
Glickman, B.W.2
-
16
-
-
0033795196
-
Interferons: cell signalling, immune modulation, antiviral response and virus countermeasures
-
Goodbourn S., Didcock L., and Randall R.E. Interferons: cell signalling, immune modulation, antiviral response and virus countermeasures. J. Gen. Virol. 81 (2000) 2341-2364
-
(2000)
J. Gen. Virol.
, vol.81
, pp. 2341-2364
-
-
Goodbourn, S.1
Didcock, L.2
Randall, R.E.3
-
17
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., and Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52 (2003) 696-704
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
18
-
-
0037423024
-
A survey of type I interferons from a marsupial and monotreme: implications for the evolution of the type I interferon gene family in mammals
-
Harrison G.A., Young L.J., Watson C.M., Miska K.B., Miller R.D., and Deane E.M. A survey of type I interferons from a marsupial and monotreme: implications for the evolution of the type I interferon gene family in mammals. Cytokine 21 (2003) 105-119
-
(2003)
Cytokine
, vol.21
, pp. 105-119
-
-
Harrison, G.A.1
Young, L.J.2
Watson, C.M.3
Miska, K.B.4
Miller, R.D.5
Deane, E.M.6
-
19
-
-
0022376704
-
Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
-
Hasegawa M., Kishino H., and Yano T. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22 (1985) 160-174
-
(1985)
J. Mol. Evol.
, vol.22
, pp. 160-174
-
-
Hasegawa, M.1
Kishino, H.2
Yano, T.3
-
20
-
-
0028828986
-
The evolution of the type I interferon gene family in mammals
-
Hughes A.L. The evolution of the type I interferon gene family in mammals. J. Mol. Evol. 41 (1995) 539-548
-
(1995)
J. Mol. Evol.
, vol.41
, pp. 539-548
-
-
Hughes, A.L.1
-
21
-
-
19344372749
-
Gene duplication: the genomic trade in spare parts
-
Hurles M. Gene duplication: the genomic trade in spare parts. PLoS Biol. 2 (2004) E206
-
(2004)
PLoS Biol.
, vol.2
-
-
Hurles, M.1
-
22
-
-
0025174082
-
Novel families of interspersed repetitive elements from the human genome
-
Jurka J. Novel families of interspersed repetitive elements from the human genome. Nucleic Acids Res. 18 (1990) 137-141
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 137-141
-
-
Jurka, J.1
-
23
-
-
0030441462
-
Identification of new medium reiteration frequency repeats in the genomes of Primates, Rodentia and Lagomorpha
-
Jurka J., Kapitonov V.V., Klonowski P., Walichiewicz J., and Smit A.F. Identification of new medium reiteration frequency repeats in the genomes of Primates, Rodentia and Lagomorpha. Genetica 98 (1996) 235-247
-
(1996)
Genetica
, vol.98
, pp. 235-247
-
-
Jurka, J.1
Kapitonov, V.V.2
Klonowski, P.3
Walichiewicz, J.4
Smit, A.F.5
-
24
-
-
0024307824
-
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea
-
Kishino H., and Hasegawa M. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea. J. Mol. Evol. 29 (1989) 170-179
-
(1989)
J. Mol. Evol.
, vol.29
, pp. 170-179
-
-
Kishino, H.1
Hasegawa, M.2
-
25
-
-
0024478347
-
Interferons and bacterial lipopolysaccharide protect macrophages from productive infection by human immunodeficiency virus in vitro
-
Kornbluth R.S., Oh P.S., Munis J.R., Cleveland P.H., and Richman D.D. Interferons and bacterial lipopolysaccharide protect macrophages from productive infection by human immunodeficiency virus in vitro. J. Exp. Med. 169 (1989) 1137-1151
-
(1989)
J. Exp. Med.
, vol.169
, pp. 1137-1151
-
-
Kornbluth, R.S.1
Oh, P.S.2
Munis, J.R.3
Cleveland, P.H.4
Richman, D.D.5
-
26
-
-
14544275616
-
A genetic algorithm approach to detecting lineage-specific variation in selection pressure
-
Kosakovsky Pond S.L., and Frost S.D. A genetic algorithm approach to detecting lineage-specific variation in selection pressure. Mol. Biol. Evol. 22 (2005) 478-485
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 478-485
-
-
Kosakovsky Pond, S.L.1
Frost, S.D.2
-
28
-
-
33748770095
-
Automated phylogenetic detection of recombination using a genetic algorithm
-
Kosakovsky Pond S.L., Posada D., Gravenor M.B., Woelk C.H., and Frost S.D. Automated phylogenetic detection of recombination using a genetic algorithm. Mol. Biol. Evol. 23 (2006) 1891-1901
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 1891-1901
-
-
Kosakovsky Pond, S.L.1
Posada, D.2
Gravenor, M.B.3
Woelk, C.H.4
Frost, S.D.5
-
29
-
-
33845361366
-
GARD: a genetic algorithm for recombination detection
-
Kosakovsky Pond S.L., Posada D., Gravenor M.B., Woelk C.H., and Frost S.D. GARD: a genetic algorithm for recombination detection. Bioinformatics 22 (2006) 3096-3098
-
(2006)
Bioinformatics
, vol.22
, pp. 3096-3098
-
-
Kosakovsky Pond, S.L.1
Posada, D.2
Gravenor, M.B.3
Woelk, C.H.4
Frost, S.D.5
-
30
-
-
0032580152
-
A molecular timescale for vertebrate evolution
-
Kumar S., and Hedges S.B. A molecular timescale for vertebrate evolution. Nature 392 (1998) 917-920
-
(1998)
Nature
, vol.392
, pp. 917-920
-
-
Kumar, S.1
Hedges, S.B.2
-
31
-
-
0029846008
-
Role of interferon-stimulated gene ISG-15 in the interferon-omega-mediated inhibition of human immunodeficiency virus replication
-
Kunzi M.S., and Pitha P.M. Role of interferon-stimulated gene ISG-15 in the interferon-omega-mediated inhibition of human immunodeficiency virus replication. J. Interferon Cytokine Res. 16 (1996) 919-927
-
(1996)
J. Interferon Cytokine Res.
, vol.16
, pp. 919-927
-
-
Kunzi, M.S.1
Pitha, P.M.2
-
32
-
-
0034948808
-
The virus battles: IFN induction of the antiviral state and mechanisms of viral evasion
-
Levy D.E., and Garcia-Sastre A. The virus battles: IFN induction of the antiviral state and mechanisms of viral evasion. Cytokine Growth Factor Rev. 12 (2001) 143-156
-
(2001)
Cytokine Growth Factor Rev.
, vol.12
, pp. 143-156
-
-
Levy, D.E.1
Garcia-Sastre, A.2
-
33
-
-
0343907348
-
Analysis of an interaction between the soluble vaccinia virus-coded type I interferon (IFN)-receptor and human IFN-alpha1 and IFN-alpha2
-
Liptakova H., Kontsekova E., Alcami A., Smith G.L., and Kontsek P. Analysis of an interaction between the soluble vaccinia virus-coded type I interferon (IFN)-receptor and human IFN-alpha1 and IFN-alpha2. Virology 232 (1997) 86-90
-
(1997)
Virology
, vol.232
, pp. 86-90
-
-
Liptakova, H.1
Kontsekova, E.2
Alcami, A.3
Smith, G.L.4
Kontsek, P.5
-
34
-
-
0020053271
-
Recent divergence from a common ancestor of human IFN-alpha genes
-
Miyata T., and Hayashida H. Recent divergence from a common ancestor of human IFN-alpha genes. Nature 295 (1982) 165-168
-
(1982)
Nature
, vol.295
, pp. 165-168
-
-
Miyata, T.1
Hayashida, H.2
-
35
-
-
0021966053
-
Evolution of interferon genes
-
Miyata T., Hayashida H., Kikuno R., Toh H., and Kawade Y. Evolution of interferon genes. Interferon 6 (1985) 1-30
-
(1985)
Interferon
, vol.6
, pp. 1-30
-
-
Miyata, T.1
Hayashida, H.2
Kikuno, R.3
Toh, H.4
Kawade, Y.5
-
36
-
-
0032692405
-
The type I interferon receptor: structure, function, and evolution of a family business
-
Mogensen K.E., Lewerenz M., Reboul J., Lutfalla G., and Uze G. The type I interferon receptor: structure, function, and evolution of a family business. J. Interferon Cytokine Res. 19 (1999) 1069-1098
-
(1999)
J. Interferon Cytokine Res.
, vol.19
, pp. 1069-1098
-
-
Mogensen, K.E.1
Lewerenz, M.2
Reboul, J.3
Lutfalla, G.4
Uze, G.5
-
38
-
-
0036779446
-
Toll-like receptor signaling and regulation of cytokine gene expression in the immune system
-
72 passim
-
Ozato K., Tsujimura H., and Tamura T. Toll-like receptor signaling and regulation of cytokine gene expression in the immune system. Biotechniques Suppl. 66-68 (2002) 70 72 passim
-
(2002)
Biotechniques Suppl.
, vol.66-68
, pp. 70
-
-
Ozato, K.1
Tsujimura, H.2
Tamura, T.3
-
39
-
-
0020531790
-
The human interferons-from protein purification and sequence to cloning and expression in bacteria: before, between, and beyond
-
Pestka S. The human interferons-from protein purification and sequence to cloning and expression in bacteria: before, between, and beyond. Arch. Biochem. Biophys. 221 (1983) 1-37
-
(1983)
Arch. Biochem. Biophys.
, vol.221
, pp. 1-37
-
-
Pestka, S.1
-
40
-
-
9644262469
-
Interferons, interferon-like cytokines, and their receptors
-
Pestka S., Krause C.D., and Walter M.R. Interferons, interferon-like cytokines, and their receptors. Immunol. Rev. 202 (2004) 8-32
-
(2004)
Immunol. Rev.
, vol.202
, pp. 8-32
-
-
Pestka, S.1
Krause, C.D.2
Walter, M.R.3
-
41
-
-
0036097812
-
Evaluation of methods for detecting recombination from DNA sequences: empirical data
-
Posada D. Evaluation of methods for detecting recombination from DNA sequences: empirical data. Mol. Biol. Evol. 19 (2002) 708-717
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 708-717
-
-
Posada, D.1
-
42
-
-
0024356449
-
Statistical tests for detecting gene conversion
-
Sawyer S. Statistical tests for detecting gene conversion. Mol. Biol. Evol. 6 (1989) 526-538
-
(1989)
Mol. Biol. Evol.
, vol.6
, pp. 526-538
-
-
Sawyer, S.1
-
43
-
-
0034020416
-
PipMaker-a web server for aligning two genomic DNA sequences
-
Schwartz S., et al. PipMaker-a web server for aligning two genomic DNA sequences. Genome Res. 10 (2000) 577-586
-
(2000)
Genome Res.
, vol.10
, pp. 577-586
-
-
Schwartz, S.1
-
44
-
-
0034769960
-
Viruses and interferons
-
Sen G.C. Viruses and interferons. Annu. Rev. Microbiol. 55 (2001) 255-281
-
(2001)
Annu. Rev. Microbiol.
, vol.55
, pp. 255-281
-
-
Sen, G.C.1
-
45
-
-
0021100597
-
Structure and expression of cloned murine IFN-alpha genes
-
Shaw G.D., Boll W., Taira H., Mantei N., Lengyel P., and Weissmann C. Structure and expression of cloned murine IFN-alpha genes. Nucleic Acids Res. 11 (1983) 555-573
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 555-573
-
-
Shaw, G.D.1
Boll, W.2
Taira, H.3
Mantei, N.4
Lengyel, P.5
Weissmann, C.6
-
46
-
-
28944453408
-
Side effects of interferon-alpha therapy
-
Sleijfer S., Bannink M., Van Gool A.R., Kruit W.H., and Stoter G. Side effects of interferon-alpha therapy. Pharm. World Sci. 27 (2005) 423-431
-
(2005)
Pharm. World Sci.
, vol.27
, pp. 423-431
-
-
Sleijfer, S.1
Bannink, M.2
Van Gool, A.R.3
Kruit, W.H.4
Stoter, G.5
-
47
-
-
0030479536
-
The origin of interspersed repeats in the human genome
-
Smit A.F. The origin of interspersed repeats in the human genome. Curr. Opin. Genet. Dev. 6 (1996) 743-748
-
(1996)
Curr. Opin. Genet. Dev.
, vol.6
, pp. 743-748
-
-
Smit, A.F.1
-
48
-
-
0026639970
-
Anti-HIV-1 activity of recombinant and hybrid species of interferon-alpha
-
Sperber S.J., Gocke D.J., Haberzettl C., Kuk R., Schwartz B., and Pestka S. Anti-HIV-1 activity of recombinant and hybrid species of interferon-alpha. J. Interf. Res. 12 (1992) 363-368
-
(1992)
J. Interf. Res.
, vol.12
, pp. 363-368
-
-
Sperber, S.J.1
Gocke, D.J.2
Haberzettl, C.3
Kuk, R.4
Schwartz, B.5
Pestka, S.6
-
49
-
-
0027374816
-
Anti-rhinoviral activity of recombinant and hybrid species of interferon alpha
-
Sperber S.J., Hunger S.B., Schwartz B., and Pestka S. Anti-rhinoviral activity of recombinant and hybrid species of interferon alpha. Antivir. Res. 22 (1993) 121-129
-
(1993)
Antivir. Res.
, vol.22
, pp. 121-129
-
-
Sperber, S.J.1
Hunger, S.B.2
Schwartz, B.3
Pestka, S.4
-
50
-
-
0031657551
-
How cells respond to interferons
-
Stark G.R., Kerr I.M., Williams B.R., Silverman R.H., and Schreiber R.D. How cells respond to interferons. Annu. Rev. Biochem. 67 (1998) 227-264
-
(1998)
Annu. Rev. Biochem.
, vol.67
, pp. 227-264
-
-
Stark, G.R.1
Kerr, I.M.2
Williams, B.R.3
Silverman, R.H.4
Schreiber, R.D.5
-
51
-
-
0021473990
-
Two non-allelic human interferon alpha genes with identical coding regions
-
Todokoro K., Kioussis D., and Weissmann C. Two non-allelic human interferon alpha genes with identical coding regions. EMBO J. 3 (1984) 1809-1812
-
(1984)
EMBO J.
, vol.3
, pp. 1809-1812
-
-
Todokoro, K.1
Kioussis, D.2
Weissmann, C.3
-
52
-
-
0021912007
-
Receptor dynamics of closely related ligands: "fast" and "slow" interferons
-
Uze G., Mogensen K.E., and Aguet M. Receptor dynamics of closely related ligands: "fast" and "slow" interferons. EMBO J. 4 (1985) 65-70
-
(1985)
EMBO J.
, vol.4
, pp. 65-70
-
-
Uze, G.1
Mogensen, K.E.2
Aguet, M.3
-
53
-
-
3242677843
-
Characterization of the murine alpha interferon gene family
-
Van Pesch V., Lanaya H., Renauld J.C., and Michiels T. Characterization of the murine alpha interferon gene family. J. Virol. 78 (2004) 8219-8228
-
(2004)
J. Virol.
, vol.78
, pp. 8219-8228
-
-
Van Pesch, V.1
Lanaya, H.2
Renauld, J.C.3
Michiels, T.4
-
55
-
-
0020960918
-
A comparison of vertebrate interferon gene families detected by hybridization with human interferon DNA
-
Wilson V., et al. A comparison of vertebrate interferon gene families detected by hybridization with human interferon DNA. J. Mol. Biol. 166 (1983) 457-475
-
(1983)
J. Mol. Biol.
, vol.166
, pp. 457-475
-
-
Wilson, V.1
-
56
-
-
9344250534
-
Interferon gene expression following HIV type 1 infection of monocyte-derived macrophages
-
Woelk C.H., et al. Interferon gene expression following HIV type 1 infection of monocyte-derived macrophages. AIDS Res. Hum. Retrovir. 20 (2004) 1210-1222
-
(2004)
AIDS Res. Hum. Retrovir.
, vol.20
, pp. 1210-1222
-
-
Woelk, C.H.1
|