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Volumn 18, Issue 7, 2007, Pages 1291-1303

Backbone Cleavages and Sequential Loss of Carbon Monoxide and Ammonia from Protonated AGG: A Combined Tandem Mass Spectrometry, Isotope Labeling, and Theoretical Study

Author keywords

[No Author keywords available]

Indexed keywords

COLLISION ACTIVATED DISSOCIATION (CAD); FRAGMENTATION; ION TRAP;

EID: 34250789712     PISSN: 10440305     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jasms.2007.03.029     Document Type: Article
Times cited : (39)

References (64)
  • 2
    • 33748168091 scopus 로고
    • Electrospray ion source: Another variation on the free-jet theme
    • Yamashita M., and Fenn J.B. Electrospray ion source: Another variation on the free-jet theme. J. Phys. Chem. 88 (1984) 4451-4459
    • (1984) J. Phys. Chem. , vol.88 , pp. 4451-4459
    • Yamashita, M.1    Fenn, J.B.2
  • 4
    • 0024289037 scopus 로고
    • Laser desorption ionization of proteins with molecular masses exceeding 10,000 Daltons
    • Karas M., and Hillenkamp F. Laser desorption ionization of proteins with molecular masses exceeding 10,000 Daltons. Anal. Chem 60 (1988) 2299-2301
    • (1988) Anal. Chem , vol.60 , pp. 2299-2301
    • Karas, M.1    Hillenkamp, F.2
  • 5
    • 0025670535 scopus 로고
    • Sequencing of peptides by tandem mass spectrometry and high-energy collision-induced dissociation
    • Biemann K. Sequencing of peptides by tandem mass spectrometry and high-energy collision-induced dissociation. Methods Enzymol. 193 (1990) 455-479
    • (1990) Methods Enzymol. , vol.193 , pp. 455-479
    • Biemann, K.1
  • 6
    • 0025642997 scopus 로고
    • Peptides and proteins: Overview and strategy
    • Biemann K. Peptides and proteins: Overview and strategy. Methods Enzymol 193 (1990) 351-360
    • (1990) Methods Enzymol , vol.193 , pp. 351-360
    • Biemann, K.1
  • 7
    • 0842285056 scopus 로고
    • The interpretation of collision-induced dissociation tandem mass spectra of peptides
    • Papayannopoulos I.A. The interpretation of collision-induced dissociation tandem mass spectra of peptides. Mass Spectrom. Rev. 14 1 (1995) 49-73
    • (1995) Mass Spectrom. Rev. , vol.14 , Issue.1 , pp. 49-73
    • Papayannopoulos, I.A.1
  • 8
    • 21844457685 scopus 로고    scopus 로고
    • Fragmentation pathways of protonated peptides
    • Paizs B., and Suhai S. Fragmentation pathways of protonated peptides. Mass Spectrom. Rev. 24 (2005) 508-548
    • (2005) Mass Spectrom. Rev. , vol.24 , pp. 508-548
    • Paizs, B.1    Suhai, S.2
  • 11
    • 0027618667 scopus 로고
    • The neutral products formed during backbone fragmentations of protonated peptides in tandem mass spectrometry
    • Cordero M.M., Houser J.J., and Wesdemiotis C. The neutral products formed during backbone fragmentations of protonated peptides in tandem mass spectrometry. Anal. Chem. 65 (1993) 1594-1601
    • (1993) Anal. Chem. , vol.65 , pp. 1594-1601
    • Cordero, M.M.1    Houser, J.J.2    Wesdemiotis, C.3
  • 14
    • 0029964466 scopus 로고    scopus 로고
    • Surface-induced dissociation: An effective tool to probe structure, energetics and fragmentation mechanisms of protonated peptides
    • Dongré A.R., Somogyi A., and Wysocki V.H. Surface-induced dissociation: An effective tool to probe structure, energetics and fragmentation mechanisms of protonated peptides. J. Mass Spectrom. 31 4 (1996) 339-350
    • (1996) J. Mass Spectrom. , vol.31 , Issue.4 , pp. 339-350
    • Dongré, A.R.1    Somogyi, A.2    Wysocki, V.H.3
  • 15
    • 0031026946 scopus 로고    scopus 로고
    • Pathways to immonium ions in the fragmentation of protonated peptides
    • Ambihapathy K., Yalcin T., Leung H.-W., and Harrison A.G. Pathways to immonium ions in the fragmentation of protonated peptides. J. Mass Spectrom. 32 (1997) 209-215
    • (1997) J. Mass Spectrom. , vol.32 , pp. 209-215
    • Ambihapathy, K.1    Yalcin, T.2    Leung, H.-W.3    Harrison, A.G.4
  • 16
    • 0000197230 scopus 로고    scopus 로고
    • Amide bond dissociation in protonated peptides. Structures of the N-terminal ionic and neutral fragments
    • Nold M.J., Wesdemiotis C., Yalcin T., and Harrison A.G. Amide bond dissociation in protonated peptides. Structures of the N-terminal ionic and neutral fragments. Int. J. Mass Spectrom. Ion Processes 164 (1997) 137-153
    • (1997) Int. J. Mass Spectrom. Ion Processes , vol.164 , pp. 137-153
    • Nold, M.J.1    Wesdemiotis, C.2    Yalcin, T.3    Harrison, A.G.4
  • 17
    • 0030810477 scopus 로고    scopus 로고
    • Collision-Induced Dissociation Threshold Energies of Protonated Glycine, Glycinamide, and Some Related Small Peptides and Peptide Amino Amides
    • Klassen J.S., and Kebarle P. Collision-Induced Dissociation Threshold Energies of Protonated Glycine, Glycinamide, and Some Related Small Peptides and Peptide Amino Amides. J. Am. Chem. Soc. 164 (1997) 6552-6563
    • (1997) J. Am. Chem. Soc. , vol.164 , pp. 6552-6563
    • Klassen, J.S.1    Kebarle, P.2
  • 19
    • 0032232401 scopus 로고    scopus 로고
    • Role of the sulfhydryl group on the gas phase fragmentation reactions of protonated cysteine and cysteine containing peptides
    • O'Hair R.A.J., Styles M.L., and Reid G.E. Role of the sulfhydryl group on the gas phase fragmentation reactions of protonated cysteine and cysteine containing peptides. J. Am. Soc. Mass Spectrom. 9 12 (1998) 1275-1284
    • (1998) J. Am. Soc. Mass Spectrom. , vol.9 , Issue.12 , pp. 1275-1284
    • O'Hair, R.A.J.1    Styles, M.L.2    Reid, G.E.3
  • 20
    • 0001113587 scopus 로고    scopus 로고
    • Probing the fragmentation reactions of protonated glycine oligomers via multistage mass spectrometry and gas phase ion molecule hydrogen/deuterium exchange
    • Reid G.E., Simpson R.J., and O'Hair R.A.J. Probing the fragmentation reactions of protonated glycine oligomers via multistage mass spectrometry and gas phase ion molecule hydrogen/deuterium exchange. Int. J. Mass Spectrom. Ion Processes 190/191 (1999) 209-230
    • (1999) Int. J. Mass Spectrom. Ion Processes , vol.190-191 , pp. 209-230
    • Reid, G.E.1    Simpson, R.J.2    O'Hair, R.A.J.3
  • 21
    • 0033370943 scopus 로고    scopus 로고
    • Proton affinities of the N- and C-terminal segments arising upon the dissociation of the amide bond in protonated peptides
    • Nold M.J., Cerda B.A., and Wesdemiotis C. Proton affinities of the N- and C-terminal segments arising upon the dissociation of the amide bond in protonated peptides. J. Am. Soc. Mass Spectrom. 10 (1999) 1-8
    • (1999) J. Am. Soc. Mass Spectrom. , vol.10 , pp. 1-8
    • Nold, M.J.1    Cerda, B.A.2    Wesdemiotis, C.3
  • 25
    • 0034082949 scopus 로고    scopus 로고
    • Reaction competition in the fragmentation of protonated dipeptides
    • Harrison A.G., Csizmadia I.G., Tang T.-H., and Tu Y.-P. Reaction competition in the fragmentation of protonated dipeptides. J. Mass Spectrom. 35 (2000) 683-688
    • (2000) J. Mass Spectrom. , vol.35 , pp. 683-688
    • Harrison, A.G.1    Csizmadia, I.G.2    Tang, T.-H.3    Tu, Y.-P.4
  • 26
    • 0034516862 scopus 로고    scopus 로고
    • Dissociation of the peptide bond in protonated peptides
    • Polce M.J., Ren D., and Wesdemiotis C. Dissociation of the peptide bond in protonated peptides. J. Mass Spectrom. 35 12 (2000) 1391-1398
    • (2000) J. Mass Spectrom. , vol.35 , Issue.12 , pp. 1391-1398
    • Polce, M.J.1    Ren, D.2    Wesdemiotis, C.3
  • 27
    • 0034501099 scopus 로고    scopus 로고
    • Mobile and localized protons: a framework for understanding peptide dissociation
    • Wysocki V.H., Tsaprailis G., Smith L.L., and Breci L.A. Mobile and localized protons: a framework for understanding peptide dissociation. J. Mass Spectrom. 35 (2000) 1399-1406
    • (2000) J. Mass Spectrom. , vol.35 , pp. 1399-1406
    • Wysocki, V.H.1    Tsaprailis, G.2    Smith, L.L.3    Breci, L.A.4
  • 28
    • 0034638359 scopus 로고    scopus 로고
    • A Comparative Study of Collision-Induced and Surface-Induced Dissociation. 1. Fragmentation of Protonated Dialanine
    • Laskin J., Denisov E., and Futrell J.H. A Comparative Study of Collision-Induced and Surface-Induced Dissociation. 1. Fragmentation of Protonated Dialanine. J. Am. Chem. Soc. 122 (2000) 9703-9714
    • (2000) J. Am. Chem. Soc. , vol.122 , pp. 9703-9714
    • Laskin, J.1    Denisov, E.2    Futrell, J.H.3
  • 29
    • 0035029537 scopus 로고    scopus 로고
    • Theoretical study of the main fragmentation pathways for protonated glycylglycine
    • Paizs B., and Suhai S. Theoretical study of the main fragmentation pathways for protonated glycylglycine. Rapid Commun. Mass Spectrom. 15 (2001) 651-663
    • (2001) Rapid Commun. Mass Spectrom. , vol.15 , pp. 651-663
    • Paizs, B.1    Suhai, S.2
  • 31
    • 0345357001 scopus 로고    scopus 로고
    • Experimental and theoretical investigation of the main fragmentation pathways of protonated H-Gly-Gly-Sar-OH and H-Gly-Sar-Sar-OH
    • Paizs B., Suhai S., and Harrison A.G. Experimental and theoretical investigation of the main fragmentation pathways of protonated H-Gly-Gly-Sar-OH and H-Gly-Sar-Sar-OH. J. Am. Soc. Mass Spectrom. 14 (2003) 1454-1469
    • (2003) J. Am. Soc. Mass Spectrom. , vol.14 , pp. 1454-1469
    • Paizs, B.1    Suhai, S.2    Harrison, A.G.3
  • 33
    • 3242661987 scopus 로고    scopus 로고
    • Intramolecular condensation reactions in protonated dipeptides: Carbon monoxide, water, and ammonia losses in competition
    • Pingitore F., Polce M.J., Wang P., Wesdemiotis C., and Paizs B. Intramolecular condensation reactions in protonated dipeptides: Carbon monoxide, water, and ammonia losses in competition. J. Am. Soc. Mass Spectrom. 15 7 (2004) 1025-1038
    • (2004) J. Am. Soc. Mass Spectrom. , vol.15 , Issue.7 , pp. 1025-1038
    • Pingitore, F.1    Polce, M.J.2    Wang, P.3    Wesdemiotis, C.4    Paizs, B.5
  • 34
    • 0029810698 scopus 로고    scopus 로고
    • Influence of Peptide Composition, Gas-Phase Basicity, and Chemical Modification on Fragmentation Efficiency: Evidence for the Mobile Proton Model
    • Dongre A.R., Jones J.L., Somogyi A., and Wysocki V.H. Influence of Peptide Composition, Gas-Phase Basicity, and Chemical Modification on Fragmentation Efficiency: Evidence for the Mobile Proton Model. J. Am. Chem. Soc. 118 (1996) 8365-8374
    • (1996) J. Am. Chem. Soc. , vol.118 , pp. 8365-8374
    • Dongre, A.R.1    Jones, J.L.2    Somogyi, A.3    Wysocki, V.H.4
  • 35
    • 0001595008 scopus 로고
    • The Effect of Protonation Site on Bond Strengths in Simple Peptides: Application of ab Initio and MNDO Bond Orders and MNDO Energy Partitioning
    • Somogyi Á., Wysocki V.H., and Mayer I. The Effect of Protonation Site on Bond Strengths in Simple Peptides: Application of ab Initio and MNDO Bond Orders and MNDO Energy Partitioning. J. Am. Soc. Mass Spectrom. 5 (1994) 704-717
    • (1994) J. Am. Soc. Mass Spectrom. , vol.5 , pp. 704-717
    • Somogyi, Á.1    Wysocki, V.H.2    Mayer, I.3
  • 36
    • 0033020531 scopus 로고    scopus 로고
    • Linear free energy correlations in mass spectrometry
    • Harrison A.G. Linear free energy correlations in mass spectrometry. J. Mass Spectrom. 34 (1999) 577-589
    • (1999) J. Mass Spectrom. , vol.34 , pp. 577-589
    • Harrison, A.G.1
  • 37
    • 0036023990 scopus 로고    scopus 로고
    • Towards understanding some ion intensity relationships for the tandem mass spectra of protonated peptides
    • Paizs B., and Suhai S. Towards understanding some ion intensity relationships for the tandem mass spectra of protonated peptides. Rapid Commun. Mass Spectrom. 16 (2002) 1699-1702
    • (2002) Rapid Commun. Mass Spectrom. , vol.16 , pp. 1699-1702
    • Paizs, B.1    Suhai, S.2
  • 38
    • 33747609610 scopus 로고    scopus 로고
    • Scrambling of Sequence Information in Collision-Induced Dissociation of Peptides
    • Harrison A.G., Young A.B., Bleiholder B., Suhai S., and Paizs B. Scrambling of Sequence Information in Collision-Induced Dissociation of Peptides. J. Am. Chem. Soc. 128 (2006) 10364-10365
    • (2006) J. Am. Chem. Soc. , vol.128 , pp. 10364-10365
    • Harrison, A.G.1    Young, A.B.2    Bleiholder, B.3    Suhai, S.4    Paizs, B.5
  • 40
    • 0042549101 scopus 로고    scopus 로고
    • The unimolecular chemistry of protonated glycinamide and the proton affinity of glycinamide mass spectrometric experiments and theoretical model
    • Kinser R.D., Ridge D.P., Hvistendahl G., Rasmussen B., and Uggerud E. The unimolecular chemistry of protonated glycinamide and the proton affinity of glycinamide mass spectrometric experiments and theoretical model. Chem. Eur. J. 2 (1996) 1143-1149
    • (1996) Chem. Eur. J. , vol.2 , pp. 1143-1149
    • Kinser, R.D.1    Ridge, D.P.2    Hvistendahl, G.3    Rasmussen, B.4    Uggerud, E.5
  • 41
    • 0030999705 scopus 로고    scopus 로고
    • An Introduction to Quadrupole Ion Trap Mass Spectrometry
    • March R.E. An Introduction to Quadrupole Ion Trap Mass Spectrometry. J. Mass Spectrom. 32 (1997) 351-369
    • (1997) J. Mass Spectrom. , vol.32 , pp. 351-369
    • March, R.E.1
  • 42
    • 0031765003 scopus 로고    scopus 로고
    • Quadrupole Ion Trap Mass Spectrometry: Theory, Simulations, Recent Developments and Applications
    • March R.E. Quadrupole Ion Trap Mass Spectrometry: Theory, Simulations, Recent Developments and Applications. Rapid Commun. Mass Spectrom. 12 (1998) 1543-1554
    • (1998) Rapid Commun. Mass Spectrom. , vol.12 , pp. 1543-1554
    • March, R.E.1
  • 43
    • 0034132537 scopus 로고    scopus 로고
    • The Characteristics of Peptide Collision-Induced Dissociation Using a High-Performance MALDI-TOF/TOF Tandem Mass Spectrometer
    • Medzihradszky K.F., Campbell J.M., Baldwin M.A., Falick A.M., Juhasz P., Vestal M.L., and Burlingame A.L. The Characteristics of Peptide Collision-Induced Dissociation Using a High-Performance MALDI-TOF/TOF Tandem Mass Spectrometer. Anal. Chem. 72 3 (2000) 552-558
    • (2000) Anal. Chem. , vol.72 , Issue.3 , pp. 552-558
    • Medzihradszky, K.F.1    Campbell, J.M.2    Baldwin, M.A.3    Falick, A.M.4    Juhasz, P.5    Vestal, M.L.6    Burlingame, A.L.7
  • 45
    • 0035997273 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption/ ionization-tandem mass spectrometry with high resolution and sensitivity for identification and characterization of proteins
    • Bienvenut W.V., Deon C., Pasquarello C., Campbell J.M., Sanchez J., Vestal M.L., and Hochstrasser D.F. Matrix-assisted laser desorption/ ionization-tandem mass spectrometry with high resolution and sensitivity for identification and characterization of proteins. Proteomics 2 7 (2002) 868-876
    • (2002) Proteomics , vol.2 , Issue.7 , pp. 868-876
    • Bienvenut, W.V.1    Deon, C.2    Pasquarello, C.3    Campbell, J.M.4    Sanchez, J.5    Vestal, M.L.6    Hochstrasser, D.F.7
  • 54
    • 0035207298 scopus 로고    scopus 로고
    • Combined quantum chemical and RRKM modeling of the main fragmentation pathways of GGG. I. Cis-trans isomerization around protonated amide bonds
    • Paizs B., and Suhai S. Combined quantum chemical and RRKM modeling of the main fragmentation pathways of GGG. I. Cis-trans isomerization around protonated amide bonds. Rapid Commun. Mass Spectrom. 15 (2001) 2307-2323
    • (2001) Rapid Commun. Mass Spectrom. , vol.15 , pp. 2307-2323
    • Paizs, B.1    Suhai, S.2
  • 55
    • 29044431915 scopus 로고    scopus 로고
    • Spectroscopic and Theoretical Evidence for Oxazolone Ring Formation in Collision-Induced Dissociation of Peptides
    • Polfer N.C., Oomens J., Suhai S., and Paizs B. Spectroscopic and Theoretical Evidence for Oxazolone Ring Formation in Collision-Induced Dissociation of Peptides. J. Am. Chem. Soc. 127 (2005) 17154-17155
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 17154-17155
    • Polfer, N.C.1    Oomens, J.2    Suhai, S.3    Paizs, B.4
  • 56
    • 0001588558 scopus 로고    scopus 로고
    • The gas-phase basicities and proton affinities of amino acids and peptides
    • Harrison A.G. The gas-phase basicities and proton affinities of amino acids and peptides. Mass Spectrom. Rev. 116 (1997) 201-217
    • (1997) Mass Spectrom. Rev. , vol.116 , pp. 201-217
    • Harrison, A.G.1
  • 57
    • 33747891291 scopus 로고    scopus 로고
    • Revising the Proton Affinity Scale of the Naturally Occurring α-Amino Acids.
    • Bleiholder C., Suhai S., and Paizs B. Revising the Proton Affinity Scale of the Naturally Occurring α-Amino Acids. J. Am. Soc. Mass Spectrom. 17 (2006) 1275-1281
    • (2006) J. Am. Soc. Mass Spectrom. , vol.17 , pp. 1275-1281
    • Bleiholder, C.1    Suhai, S.2    Paizs, B.3
  • 58
    • 57249083938 scopus 로고    scopus 로고
    • Some recent aspects of unimolecular gas phase ion chemistry
    • Lifshitz C. Some recent aspects of unimolecular gas phase ion chemistry. Chem. Soc. Rev. 30 (2001) 186-192
    • (2001) Chem. Soc. Rev. , vol.30 , pp. 186-192
    • Lifshitz, C.1
  • 59
    • 0034055215 scopus 로고    scopus 로고
    • Proton mobility in protonated peptides: A joint molecular orbital and RRKM study
    • Csonka I.P., Paizs B., Lendvay G., and Suhai S. Proton mobility in protonated peptides: A joint molecular orbital and RRKM study. Rapid Commun. Mass Spectrom. 14 (2000) 417-431
    • (2000) Rapid Commun. Mass Spectrom. , vol.14 , pp. 417-431
    • Csonka, I.P.1    Paizs, B.2    Lendvay, G.3    Suhai, S.4
  • 60
    • 0035029536 scopus 로고    scopus 로고
    • Proton mobility in protonated glycylglycine and N-formylglycylglycinamide: A combined quantum chemical and RKKM study
    • Paizs B., Csonka I.P., Lendvay G., and Suhai S. Proton mobility in protonated glycylglycine and N-formylglycylglycinamide: A combined quantum chemical and RKKM study. Rapid Commun. Mass Spectrom. 15 (2001) 637-650
    • (2001) Rapid Commun. Mass Spectrom. , vol.15 , pp. 637-650
    • Paizs, B.1    Csonka, I.P.2    Lendvay, G.3    Suhai, S.4
  • 62
    • 0034269273 scopus 로고    scopus 로고
    • Comparison of the Accurate Kohn-Sham Solution with the Generalized Gradient Approximations (GGAs) for the SN2 Reaction F- + CH3F -/> FCH3 + F-: A Qualitative Rule To Predict Success or Failure of GGAs
    • Gritsenko O.V., Ensing B., Schipper P.R.T., and Baerends E.J. Comparison of the Accurate Kohn-Sham Solution with the Generalized Gradient Approximations (GGAs) for the SN2 Reaction F- + CH3F -/> FCH3 + F-: A Qualitative Rule To Predict Success or Failure of GGAs. J. Phys. Chem. A 104 (2000) 8558-8565
    • (2000) J. Phys. Chem. A , vol.104 , pp. 8558-8565
    • Gritsenko, O.V.1    Ensing, B.2    Schipper, P.R.T.3    Baerends, E.J.4
  • 63
    • 0032232014 scopus 로고    scopus 로고
    • Fragmentation of Protonated Amides Through Intermediate Ion-Neutral Complexes: Neighboring Group Participation
    • Tu Y.-P., and Harrison A.G. Fragmentation of Protonated Amides Through Intermediate Ion-Neutral Complexes: Neighboring Group Participation. J. Am. Soc. Mass Spectrom. 9 5 (1998) 454-462
    • (1998) J. Am. Soc. Mass Spectrom. , vol.9 , Issue.5 , pp. 454-462
    • Tu, Y.-P.1    Harrison, A.G.2


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