메뉴 건너뛰기




Volumn 247, Issue 2, 2007, Pages 331-336

Do scale-free regulatory networks allow more expression than random ones?

Author keywords

Complex networks; Gene networks; Network assembly; Regulatory interactions; Transcriptional regulatory networks

Indexed keywords

COMPUTER SYSTEM; GENE EXPRESSION; GENETIC ALGORITHM; GENOME; NETWORK ANALYSIS; SOFTWARE;

EID: 34249892465     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2007.03.017     Document Type: Article
Times cited : (10)

References (37)
  • 1
    • 27944493925 scopus 로고    scopus 로고
    • Scale-free networks in cell biology
    • Albert R. Scale-free networks in cell biology. J. Cell Sci. 118 (2005) 4947-4957
    • (2005) J. Cell Sci. , vol.118 , pp. 4947-4957
    • Albert, R.1
  • 2
    • 0036013593 scopus 로고    scopus 로고
    • Statistical mechanics of complex networks
    • Albert R., and Barabási A.-L. Statistical mechanics of complex networks. Rev. Mod. Phys. 74 (2002) 47-97
    • (2002) Rev. Mod. Phys. , vol.74 , pp. 47-97
    • Albert, R.1    Barabási, A.-L.2
  • 3
    • 0037686112 scopus 로고    scopus 로고
    • The topology of the regulatory interactions predicts the expression pattern of the segment polarity in Drosophila melanogaster
    • Albert R., and Othmer H.G. The topology of the regulatory interactions predicts the expression pattern of the segment polarity in Drosophila melanogaster. J. Theor. Biol. 223 (2003) 1-18
    • (2003) J. Theor. Biol. , vol.223 , pp. 1-18
    • Albert, R.1    Othmer, H.G.2
  • 4
    • 0033539175 scopus 로고    scopus 로고
    • Diameter of the world-wide web
    • Albert R., Jeong H., and Barabási A.-L. Diameter of the world-wide web. Nature 401 (1999) 130-131
    • (1999) Nature , vol.401 , pp. 130-131
    • Albert, R.1    Jeong, H.2    Barabási, A.-L.3
  • 5
    • 0037102646 scopus 로고    scopus 로고
    • Evolution of the social network of scientific collaborations
    • Barabási A.-L., Jeong H., Ravasz E., Néda Z., et al. Evolution of the social network of scientific collaborations. Physica A 311 (2002) 590-614
    • (2002) Physica A , vol.311 , pp. 590-614
    • Barabási, A.-L.1    Jeong, H.2    Ravasz, E.3    Néda, Z.4
  • 9
    • 0036500609 scopus 로고    scopus 로고
    • A genomic regulatory network for development
    • Davidson E.H., Rast J.P., Oliveri P., Ransick A., et al. A genomic regulatory network for development. Science 295 (2002) 1669-1678
    • (2002) Science , vol.295 , pp. 1669-1678
    • Davidson, E.H.1    Rast, J.P.2    Oliveri, P.3    Ransick, A.4
  • 11
    • 0345600247 scopus 로고    scopus 로고
    • A protein interaction map of Drosophila melanogaster
    • Giot L., Bader J.S., Brouwer C., Chaudhuri A., et al. A protein interaction map of Drosophila melanogaster. Science 302 (2003) 1727-1736
    • (2003) Science , vol.302 , pp. 1727-1736
    • Giot, L.1    Bader, J.S.2    Brouwer, C.3    Chaudhuri, A.4
  • 12
    • 0036578654 scopus 로고    scopus 로고
    • Topological and causal structure of the yeast transcriptional regulatory network
    • Guelzim N., Bottani S., Bourgine P., and Képes F. Topological and causal structure of the yeast transcriptional regulatory network. Nat. Genet. 31 (2002) 60-63
    • (2002) Nat. Genet. , vol.31 , pp. 60-63
    • Guelzim, N.1    Bottani, S.2    Bourgine, P.3    Képes, F.4
  • 13
    • 2942568426 scopus 로고    scopus 로고
    • Modeling the world-wide airport network
    • Guimerá R., and Amaral L.A.N. Modeling the world-wide airport network. Eur. Phys. J. B 38 (2004) 381-385
    • (2004) Eur. Phys. J. B , vol.38 , pp. 381-385
    • Guimerá, R.1    Amaral, L.A.N.2
  • 14
    • 20344377406 scopus 로고    scopus 로고
    • The world-wide air transportation network: anomalous centrality, community structure, and cities' global roles
    • Guimerá R., Mossa S., Turtschi A., and Amaral L.A.N. The world-wide air transportation network: anomalous centrality, community structure, and cities' global roles. Proc. Natl Acad. Sci. USA 102 (2005) 7794-7799
    • (2005) Proc. Natl Acad. Sci. USA , vol.102 , pp. 7794-7799
    • Guimerá, R.1    Mossa, S.2    Turtschi, A.3    Amaral, L.A.N.4
  • 15
    • 0344631083 scopus 로고    scopus 로고
    • Growth dynamics of the World-Wide Web
    • Huberman B.A., and Adamic L.A. Growth dynamics of the World-Wide Web. Nature 401 (1999) 131
    • (1999) Nature , vol.401 , pp. 131
    • Huberman, B.A.1    Adamic, L.A.2
  • 18
    • 0037266152 scopus 로고    scopus 로고
    • Invariant properties in coevolutionary networks of plant-animal interactions
    • Jordano P., Bascompte J., and Olesen J.M. Invariant properties in coevolutionary networks of plant-animal interactions. Ecol. Lett. 6 (2003) 69-81
    • (2003) Ecol. Lett. , vol.6 , pp. 69-81
    • Jordano, P.1    Bascompte, J.2    Olesen, J.M.3
  • 19
    • 0014489272 scopus 로고
    • Metabolic stability and epigenesis in randomly constructed genetics nets
    • Kauffman S.A. Metabolic stability and epigenesis in randomly constructed genetics nets. J. Theor. Biol. 22 (1969) 437-467
    • (1969) J. Theor. Biol. , vol.22 , pp. 437-467
    • Kauffman, S.A.1
  • 20
    • 0037161658 scopus 로고    scopus 로고
    • All genomes great and small
    • Knight J. All genomes great and small. Nature 417 (2002) 374-376
    • (2002) Nature , vol.417 , pp. 374-376
    • Knight, J.1
  • 21
    • 27644484749 scopus 로고    scopus 로고
    • A protein interaction network of the malaria parasite Plasmodium falciparum
    • LaCount D.J., Vignali M., Chettier R., Phansalkar A., et al. A protein interaction network of the malaria parasite Plasmodium falciparum. Nature 438 (2005) 103-107
    • (2005) Nature , vol.438 , pp. 103-107
    • LaCount, D.J.1    Vignali, M.2    Chettier, R.3    Phansalkar, A.4
  • 22
    • 0037174671 scopus 로고    scopus 로고
    • Transcriptional regulatory networks in Saccharomyces cerevisiae
    • Lee T.I., Rinaldi N.J., Robert F., Odom D.T., et al. Transcriptional regulatory networks in Saccharomyces cerevisiae. Science 298 (2002) 799-804
    • (2002) Science , vol.298 , pp. 799-804
    • Lee, T.I.1    Rinaldi, N.J.2    Robert, F.3    Odom, D.T.4
  • 23
    • 0037819447 scopus 로고    scopus 로고
    • Transcription regulation and animal diversity
    • Levine M., and Tjian R. Transcription regulation and animal diversity. Nature 424 (2003) 147-151
    • (2003) Nature , vol.424 , pp. 147-151
    • Levine, M.1    Tjian, R.2
  • 27
    • 4644326931 scopus 로고    scopus 로고
    • Genomic analysis of regulatory network dynamics reveals large topological changes
    • Luscombe N.M., Madan Babu M., Yu H., Snyder M., et al. Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 431 (2004) 308-312
    • (2004) Nature , vol.431 , pp. 308-312
    • Luscombe, N.M.1    Madan Babu, M.2    Yu, H.3    Snyder, M.4
  • 28
    • 33646113855 scopus 로고    scopus 로고
    • Evolutionary dynamics of prokaryotic transcriptional regulatory networks
    • Madan Babu M., Teichmann S.A., and Aravind L. Evolutionary dynamics of prokaryotic transcriptional regulatory networks. J. Mol. Biol. 358 (2006) 614-633
    • (2006) J. Mol. Biol. , vol.358 , pp. 614-633
    • Madan Babu, M.1    Teichmann, S.A.2    Aravind, L.3
  • 29
    • 22444436489 scopus 로고    scopus 로고
    • An analytical study of the number of steady states in gene regulatory networks
    • Mochizuki A. An analytical study of the number of steady states in gene regulatory networks. J. Theor. Biol. 236 (2005) 291-310
    • (2005) J. Theor. Biol. , vol.236 , pp. 291-310
    • Mochizuki, A.1
  • 30
    • 0035895239 scopus 로고    scopus 로고
    • The structure of scientific collaboration networks
    • Newman M.E.J. The structure of scientific collaboration networks. Proc. Natl Acad. Sci. USA 98 (2001) 404-409
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 404-409
    • Newman, M.E.J.1
  • 31
    • 0038718854 scopus 로고    scopus 로고
    • The structure and function of complex networks
    • Newman M.E.J. The structure and function of complex networks. SIAM Rev. 45 (2003) 167-256
    • (2003) SIAM Rev. , vol.45 , pp. 167-256
    • Newman, M.E.J.1
  • 33
    • 0002596015 scopus 로고
    • Food web complexity and species diversity
    • Paine R.T. Food web complexity and species diversity. Am. Nat. 100 (1966) 65-75
    • (1966) Am. Nat. , vol.100 , pp. 65-75
    • Paine, R.T.1
  • 34
    • 0004290829 scopus 로고
    • Chapman & Hall, London
    • Pimm S.L. Food Webs (1982), Chapman & Hall, London
    • (1982) Food Webs
    • Pimm, S.L.1
  • 36
    • 0035826155 scopus 로고    scopus 로고
    • Exploring complex networks
    • Strogatz S.H. Exploring complex networks. Nature 410 (2001) 268-276
    • (2001) Nature , vol.410 , pp. 268-276
    • Strogatz, S.H.1
  • 37
    • 0141993704 scopus 로고    scopus 로고
    • A gene-coexpression network for global discovery of conserved genetic modules
    • Stuart J.M., Segal E., Koller D., and Kim S.K. A gene-coexpression network for global discovery of conserved genetic modules. Science 302 (2003) 249-255
    • (2003) Science , vol.302 , pp. 249-255
    • Stuart, J.M.1    Segal, E.2    Koller, D.3    Kim, S.K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.