ssDNA templated self-assembly of chromophores

Journal of the American Chemical Society

Volumn 129, Issue 19, 2007, Pages 6078-6079

  Janssen, Pim G A ^a   Vandenbergh, Joke ^a   Van Dongen, Joost L J ^a   Meijer, E W ^a   Schenning, Albertus P H J ^a  

^a EINDHOVEN UNIVERSITY OF TECHNOLOGY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

SINGLE STRANDED DNA;

ABSORPTION SPECTROSCOPY; ARTICLE; CHROMATOPHORE; CIRCULAR DICHROISM; ELECTROSPRAY MASS SPECTROMETRY; HYDROGEN BOND; MOLECULAR INTERACTION; STOICHIOMETRY;

CIRCULAR DICHROISM; DNA, SINGLE-STRANDED; HYDROGEN BONDING; MACROMOLECULAR SUBSTANCES; NANOTECHNOLOGY; NAPHTHALENES; POLYVINYLS; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; THYMIDINE;

EID: 34249035443     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja0711967     Document Type: Article

References (40)

1. For recent examples and reviews, see: (a) Seeman, N. C. Methods Mol. Biol. 2005, 303, 143-166.
2. (b) Rothemund, P. W. K. Nature 2006, 440, 297-302.
3. (c) Ding, B.; Seeman, N. C. Science 2006, 314, 1583-1585.
4. (d) Gothelf, K. V.; LaBean, T. H. Org. Biomol. Chem. 2005, 3, 4023-4037.
5. (e) Brucale, M.; Zuccheri, G.; Samori, B. Trends Biotechnol. 2006, 24, 235-243.
6. (f) Lund, K.; Williams, B.; Ke, Y.; Liu, Y.; Yan, H. Curr. Nanosci. 2006, 2, 113-122.
7. Examples of other templates: (a) Sugimoto, T.; Suzuki, T.; Shinkai, S.; Sada, K. J. Am. Chem. Soc. 2007, 129, 270-271.
8. (b) Lee, S. K.; Yun, D. S.; Belcher, A. M. Biomacromolecules 2006, 7, 14-17.
9. (c) Kato, T.; Frechet, J.-M. J. Liq. Cryst. 2006, 33, 1429-1433.
10. (d) Ikkala, O.; ten Brinke, G. Chem. Commun. 2004, 19, 2131-2137.
11. For recent examples and reviews, see: (a) Lewis, F. D.; Zhang, L.; Zuo, X. J. Am. Chem. Soc. 2005, 127, 10002-10003.
12. (b) Cuppoletti, A.; Cho, Y.; Park, J.-S.; Strässler, C.; Kool, E. T. Bioconjugate Chem. 2005, 16, 528-534.
13. (c) Balaz, M.; Holmes, A. E.; Benedetti, M.; Rodriquez, P. C.; Berova, N.; Naknishi, K.; Proni, G. J. Am. Chem. Soc. 2005, 127, 4172-4173.
14. (d) Kashida, H.; Asanuma, H.; Komiyama, M. Angew. Chem., Int. Ed. 2004, 43, 6522-6525.
15. For recent examples and reviews, see: (a) Ihmels, H.; Otto, D. Top. Curr. Chem. 2005, 258, 161-204.
16. (b) Pindur, U.; Jansen, M.; Lemster, T. Curr. Med. Chem. 2005, 12, 2805-2847.
17. (c) Armitage, B. A. Mol. Supramol. Photochem. 2006, 14, 255-287.
18. (d) Fechter, E. J.; Olenyuk, B.; Dervan, P. B. J. Am. Chem. Soc. 2005, 127, 16685-16691.
19. For example: (a) Tanaka, K.; Tengeiji, A.; Kato, T. N.; Shonoya, M. Science 2003, 299, 1212-1213.
20. (b) Tanaka, K.; Clever, G. H.; Takezawa, Y.; Yamada, Y.; Kaul, C.; Shionoya, M.; Carell, T. Nat. Nanotechnol. 2006, 1, 190-194.
21. (a) Iwaura, R.; Hoeben, F. J. M.; Masuda, M.; Schenning, A. P. H. J.; Meijer, E. W.; Shimizu, T. J. Am. Chem. Soc. 2006, 128, 13298-13304.
22. (b) Iwaura, R.; Yoshida, K.; Masuda, M.; Ohnishi-Kameyama, M.; Yoshida, M.; Shimizu, T. Angew. Chem., Int. Ed. 2003, 42, 1009-1012.
23. (a) Nielsen, P. E.; Egholm, M.; Berg, R. H.; Buchardt, O. Science 1991, 245, 1497-1500.
24. (b) Nielsen, P. E.; Haaima, G. Chem. Soc. Rev. 1997, 73-78.
25. (c) de Koning, M. C.; van der Marel, G. A.; Overhand, M. Curr. Opin. Chem. Biol. 2003, 7, 734-740.
26. (d) Eckstein, F. Nucleosides Nucleotides 1985, 4, 165-167.
27. (d) Kool, E. T. Acc. Chem. Res. 2002, 35, 936-943.
28. (e) Kool, E. T. Chem. Rev. 1997, 97, 1473-1487.
29. (f) Krueger, A. T.; Lu, H.; Lee, A. H. F.; Kool, E. T. Acc. Chem. Res. 2007, 40, 141-150.
30. Jonkheijm, P.; Hoeben, F. J. M.; Kleppinger, R.; van Herrikhuyzen, J.; Schenning, A. P. H. J.; Meijer, E. W. J. Am. Chem. Soc. 2003, 125, 15941-15949.
31. See Supporting Information.
32. It should be noted that dT40 shows a small Cotton effect below 300 nm.
33. Dynamic light scattering (DLS) experiments hardly showed scattering indicating relatively small aggregates, while the contrast in the cryo-TEM images was too low to judge the size and shape of the aggregates.
34. (a) Jonkheijm, P.; van der Schoot, P.; Schenning, A. P. H. J.; Meijer, E. W. Science 2006, 313, 80-83.
35. (b) Ciferri, A. Supramolecular Polymers, 2nd ed.; CRC Press LLC: Boca Raton, FL, 2005; pp 77-106.
36. We did not analyze the cooling curves in detail because our recently developed nucleation growth model is not valid for discrete assembly; see ref 12a.
37. Breslauer, K. J.; Frank, R.; Blocker, H.; Marky, L. A. Proc. Natl. Acad. Sci. U.S.A. 1986, 83, 9373-9377.
38. For example: (a) Grimsdale, A. C.; Müllen, K. Angew. Chem., Int. Ed. 2005, 44, 5592-5629.
39. (b) Schenning, A. P. H. J.; Meijer, E. W. Chem. Commun. 2005, 3245-3258.
40. (c) Yamamoto, Y.; Fukushima, T.; Suna, Y.; Ishii, N.; Saeki, A.; Seki, S.; Tagawa, S.; Taniguchi, M.; Kawai, T.; Aida, T. Science 2006, 314, 1761-1764.