-
1
-
-
17844379221
-
6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter
-
Barrick,J.E., Sudarsan,N., Weinberg,Z., Ruzzo,W.L. and Breaker,R.R. (2005) 6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter. RNA, 11, 774-784.
-
(2005)
RNA
, vol.11
, pp. 774-784
-
-
Barrick, J.E.1
Sudarsan, N.2
Weinberg, Z.3
Ruzzo, W.L.4
Breaker, R.R.5
-
2
-
-
0036667443
-
Identification and characterization of novel small RNAs in the aspS-yrvM intergenic region of the Bacillus subtilis genome
-
Suzuma,S., Asari,S., Bunai,K., Yoshino,K., Ando,Y., Kakeshita,H., Fujita,M., Nakamura,K. and Yamane,K. (2002) Identification and characterization of novel small RNAs in the aspS-yrvM intergenic region of the Bacillus subtilis genome. Microbiology, 148 2591-2598.
-
(2002)
Microbiology
, vol.148
, pp. 2591-2598
-
-
Suzuma, S.1
Asari, S.2
Bunai, K.3
Yoshino, K.4
Ando, Y.5
Kakeshita, H.6
Fujita, M.7
Nakamura, K.8
Yamane, K.9
-
3
-
-
0037154430
-
Expression of a small RNA, BS203 RNA, from the yocI-yocJ intergenic region of Bacillus subtilis genome
-
Ando,Y., Asari,S., Suzuma,S., Yamane,K. and Nakamura,K. (2002) Expression of a small RNA, BS203 RNA, from the yocI-yocJ intergenic region of Bacillus subtilis genome. FEMS Microbiol. Lett., 207, 29-33.
-
(2002)
FEMS Microbiol. Lett
, vol.207
, pp. 29-33
-
-
Ando, Y.1
Asari, S.2
Suzuma, S.3
Yamane, K.4
Nakamura, K.5
-
4
-
-
34447324059
-
-
Wiley-VCH GmbH & Co, Weinheim, pp
-
Brown,J.W. and Ellis,J.C. (2005) Comparative Analysis of RNA Secondary Structures: 6S RNA, Wiley-VCH GmbH & Co, Weinheim, pp. 491-512.
-
(2005)
Comparative Analysis of RNA Secondary Structures: 6S RNA
, pp. 491-512
-
-
Brown, J.W.1
Ellis, J.C.2
-
5
-
-
0034625237
-
6S RNA regulates E. coli RNA polymerase activity
-
Wassarman,K.M. and Storz,G. (2000) 6S RNA regulates E. coli RNA polymerase activity. Cell, 101, 613-623.
-
(2000)
Cell
, vol.101
, pp. 613-623
-
-
Wassarman, K.M.1
Storz, G.2
-
6
-
-
0023650987
-
The sequence of the 6S RNA gene of Pseudomonas aeruginosa
-
Vogel,D.W., Hartmann,R.K., Struck,J.C., Ulbrich,N. and Erdmann,V.A. (1987) The sequence of the 6S RNA gene of Pseudomonas aeruginosa. Nucleic Acids Res., 15, 4583-4591.
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 4583-4591
-
-
Vogel, D.W.1
Hartmann, R.K.2
Struck, J.C.3
Ulbrich, N.4
Erdmann, V.A.5
-
7
-
-
0017843404
-
Small stable RNAs from Escherichia coli: Evidence for the existence of new molecules and for a new ribonucleoprotein particle containing 6S RNA
-
Lee,S.Y., Bailey,S.C. and Apirion,D. (1978) Small stable RNAs from Escherichia coli: Evidence for the existence of new molecules and for a new ribonucleoprotein particle containing 6S RNA. J. Bacteriol., 133, 1015-1023.
-
(1978)
J. Bacteriol
, vol.133
, pp. 1015-1023
-
-
Lee, S.Y.1
Bailey, S.C.2
Apirion, D.3
-
8
-
-
3242807381
-
6S RNA function enhances long-term cell survival
-
Trotochaud,A.E. and Wassarman,K.M. (2004) 6S RNA function enhances long-term cell survival. J. Bacteriol., 186, 4978-4985.
-
(2004)
J. Bacteriol
, vol.186
, pp. 4978-4985
-
-
Trotochaud, A.E.1
Wassarman, K.M.2
-
9
-
-
0021943518
-
Improved M13 mp18 pUC19 vectors
-
Yanisch-Peron,C., Vieira,J. and Messing,J. (1985) Improved M13 mp18 pUC19 vectors. Gene, 33, 103-119.
-
(1985)
Gene
, vol.33
, pp. 103-119
-
-
Yanisch-Peron, C.1
Vieira, J.2
Messing, J.3
-
10
-
-
0021759146
-
The effect of tRNA binding on the structure of 5S RNA in E. coli. A chemical modification study
-
Göringer,H.U., Bertram,S. and Wagner,R. (1984) The effect of tRNA binding on the structure of 5S RNA in E. coli. A chemical modification study. J. Biol. Chem., 259, 491-496.
-
(1984)
J. Biol. Chem
, vol.259
, pp. 491-496
-
-
Göringer, H.U.1
Bertram, S.2
Wagner, R.3
-
11
-
-
0024241761
-
Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension
-
Stern,S., Moazed,D. and Noller,H.F. (1988) Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension. Methods Enzymol., 164, 481-489.
-
(1988)
Methods Enzymol
, vol.164
, pp. 481-489
-
-
Stern, S.1
Moazed, D.2
Noller, H.F.3
-
12
-
-
0023700867
-
Visualization and quantitative analysis of complex formation between E. coli RNA polymerase and an rRNA promoter in vitro
-
Gourse,R.L. (1988) Visualization and quantitative analysis of complex formation between E. coli RNA polymerase and an rRNA promoter in vitro. Nucleic Acids Res., 16, 9789-9809.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 9789-9809
-
-
Gourse, R.L.1
-
13
-
-
0016748261
-
A procedure for the rapid, large scale purification of E. coli DNA-dependent RNA polymerase involving Polymin P precipitation and DNA cellulose chromatography
-
Burgess,R.R. and Jendrisak,J.J. (1975) A procedure for the rapid, large scale purification of E. coli DNA-dependent RNA polymerase involving Polymin P precipitation and DNA cellulose chromatography. Biochemistry, 14, 4636-4638.
-
(1975)
Biochemistry
, vol.14
, pp. 4636-4638
-
-
Burgess, R.R.1
Jendrisak, J.J.2
-
14
-
-
0017684749
-
A simple procedure for resolution of E. coli RNA polymerase holoenzyme from core polymerase
-
Gonzales,N., Wiggs,J. and Chamberlin,M.J. (1977) A simple procedure for resolution of E. coli RNA polymerase holoenzyme from core polymerase. Arch. Biochem. Biophys., 182, 404-408.
-
(1977)
Arch. Biochem. Biophys
, vol.182
, pp. 404-408
-
-
Gonzales, N.1
Wiggs, J.2
Chamberlin, M.J.3
-
15
-
-
0026019420
-
Identification of a subunit assembly domain in the alpha subunit of Escherichia coli RNA polymerase
-
Igarashi,K., Fujita,N. and Ishihama,A. (1991) Identification of a subunit assembly domain in the alpha subunit of Escherichia coli RNA polymerase. J. Mol. Biol., 218, 1-6.
-
(1991)
J. Mol. Biol
, vol.218
, pp. 1-6
-
-
Igarashi, K.1
Fujita, N.2
Ishihama, A.3
-
16
-
-
0027744758
-
Recombinant Escherichia coli RNA polymerase: Purification of individually overexpressed subunits and in vitro assembly
-
Borukhov,S. and Goldfarb,A. (1993) Recombinant Escherichia coli RNA polymerase: Purification of individually overexpressed subunits and in vitro assembly. Protein Expr. Purif., 4, 503-511.
-
(1993)
Protein Expr. Purif
, vol.4
, pp. 503-511
-
-
Borukhov, S.1
Goldfarb, A.2
-
17
-
-
0027669778
-
38, is a second principal σ factor of RNA polymerase in stationary-phase Escherichia coli
-
38, is a second principal σ factor of RNA polymerase in stationary-phase Escherichia coli. Proc. Natl. Acad. Sci. USA., 90, 3511-3515.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 3511-3515
-
-
Tanaka, K.1
Takayanagi, Y.2
Fujita, N.3
Ishihama, A.4
Takahashi, H.5
-
18
-
-
18344371528
-
A highly conserved 6S RNA structure is required for regulation of transcription
-
Trotochaud,A.E. and Wassarman,K.M. (2005) A highly conserved 6S RNA structure is required for regulation of transcription. Nature Structural Biol., 12, 313-319.
-
(2005)
Nature Structural Biol
, vol.12
, pp. 313-319
-
-
Trotochaud, A.E.1
Wassarman, K.M.2
-
19
-
-
3242697144
-
Factors influencing preferential utilization of RNA polymerase containing sigma-38 in stationary-phase gene expression in Escherichia coli
-
Kim,E.Y., Shin,M.S., Rhee,J.H. and Choy,H.E. (2004) Factors influencing preferential utilization of RNA polymerase containing sigma-38 in stationary-phase gene expression in Escherichia coli. J. Microbiol. 42, 103-110.
-
(2004)
J. Microbiol
, vol.42
, pp. 103-110
-
-
Kim, E.Y.1
Shin, M.S.2
Rhee, J.H.3
Choy, H.E.4
-
20
-
-
0034725870
-
A structural model of transcription elongation
-
Korzheva,N., Mustaev,A., Kozlov,M., Malhotra,A., Nikiforov,V., Goldfarb,A. and Darst,S.A. (2000) A structural model of transcription elongation. Science, 289, 619-625.
-
(2000)
Science
, vol.289
, pp. 619-625
-
-
Korzheva, N.1
Mustaev, A.2
Kozlov, M.3
Malhotra, A.4
Nikiforov, V.5
Goldfarb, A.6
Darst, S.A.7
-
21
-
-
4344579113
-
The SINE-encoded mouse B2 RNA represses mRNA transcription in response to heat shock
-
Allen,T.A., Von Kaenel,S., Goodrich,J.A. and Kugel,J.F. (2004) The SINE-encoded mouse B2 RNA represses mRNA transcription in response to heat shock. Nat. Struct. Mol. Biol., 11, 816-821.
-
(2004)
Nat. Struct. Mol. Biol
, vol.11
, pp. 816-821
-
-
Allen, T.A.1
Von Kaenel, S.2
Goodrich, J.A.3
Kugel, J.F.4
-
22
-
-
4344583992
-
B2 RNA binds directly to RNA polymerase II to repress transcript synthesis
-
Espinoza,C.A., Allen,T.A., Hieb,A.R., Kugel,J.F. and Goodrich,J.A. (2004) B2 RNA binds directly to RNA polymerase II to repress transcript synthesis. Nat. Struct. Mol. Biol., 11, 822-829.
-
(2004)
Nat. Struct. Mol. Biol
, vol.11
, pp. 822-829
-
-
Espinoza, C.A.1
Allen, T.A.2
Hieb, A.R.3
Kugel, J.F.4
Goodrich, J.A.5
-
23
-
-
2642549770
-
Binding site of Escherichia coli RNA polymerase to an RNA promoter
-
Pelchat,M. and Perreault,J.P. (2004) Binding site of Escherichia coli RNA polymerase to an RNA promoter. Biochem. Biophys. Res. Commun. 319, 636-642.
-
(2004)
Biochem. Biophys. Res. Commun
, vol.319
, pp. 636-642
-
-
Pelchat, M.1
Perreault, J.P.2
-
24
-
-
0037150071
-
Characterization of a viroid-derived RNA promoter for the DNA-dependent RNA polymerase from Escherichia coli
-
Pelchat,M., Grenier,C. and Perreault,J.P. (2002) Characterization of a viroid-derived RNA promoter for the DNA-dependent RNA polymerase from Escherichia coli. Biochemistry, 41, 6561-6571.
-
(2002)
Biochemistry
, vol.41
, pp. 6561-6571
-
-
Pelchat, M.1
Grenier, C.2
Perreault, J.P.3
-
25
-
-
0035916889
-
RNA species that replicate with DNA-dependent RNA polymerase from Escherichia coli
-
Wettich,A. and Biebricher,C.K. (2001) RNA species that replicate with DNA-dependent RNA polymerase from Escherichia coli. Biochemistry, 40, 3308-3315.
-
(2001)
Biochemistry
, vol.40
, pp. 3308-3315
-
-
Wettich, A.1
Biebricher, C.K.2
-
26
-
-
0031925720
-
Growth phase coupled modulation of Escherichia coli ribosomes
-
Wada,A. (1998) Growth phase coupled modulation of Escherichia coli ribosomes. Genes Cells, 3, 203-208.
-
(1998)
Genes Cells
, vol.3
, pp. 203-208
-
-
Wada, A.1
-
27
-
-
0027463636
-
Regulation of the Escherichia coli rmf gene encoding the ribosome modulation factor - growth phase-dependent and growth rate-dependent control
-
Yamagishi,M., Matsushima,H., Wada,A., Sakagami,M., Fujita,N. and Ishihama,A. (1993) Regulation of the Escherichia coli rmf gene encoding the ribosome modulation factor - growth phase-dependent and growth rate-dependent control. EMBO J., 12, 625-630.
-
(1993)
EMBO J
, vol.12
, pp. 625-630
-
-
Yamagishi, M.1
Matsushima, H.2
Wada, A.3
Sakagami, M.4
Fujita, N.5
Ishihama, A.6
-
28
-
-
33744774173
-
6S RNA regulation of pspF transcription leads to altered cell survival at high pH
-
Trotochaud,A.E. and Wassarman,K.M. (2006) 6S RNA regulation of pspF transcription leads to altered cell survival at high pH. J. Bacteriol., 188, 3936-3943.
-
(2006)
J. Bacteriol
, vol.188
, pp. 3936-3943
-
-
Trotochaud, A.E.1
Wassarman, K.M.2
|