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Volumn 9, Issue 2, 2007, Pages 166-178

Profiling transcriptome complexity and secondary metabolite synthesis in a benthic soft coral, Sinularia polydactyla

Author keywords

Chemical defense; Phenotypic plasticity; Predation; Sinularia; Soft coral transcriptome

Indexed keywords

CHEMICAL DEFENSE; PHENOTYPIC PLASTICITY; PREDATION; SINULARIA; SOFT CORAL TRANSCRIPTOME;

EID: 34247598834     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-006-6048-y     Document Type: Article
Times cited : (7)

References (47)
  • 1
    • 0037067641 scopus 로고    scopus 로고
    • Evolution of the gene network underlying wing polymorphism in ants
    • Abouheif E, Wray GA (2002) Evolution of the gene network underlying wing polymorphism in ants. Science 297, 249-252
    • (2002) Science , vol.297 , pp. 249-252
    • Abouheif, E.1    Wray, G.A.2
  • 2
    • 0035850895 scopus 로고    scopus 로고
    • Phenotypic plasticity in the interactions and evolution of species
    • Agrawal AA (2001) Phenotypic plasticity in the interactions and evolution of species. Science 294, 321-326
    • (2001) Science , vol.294 , pp. 321-326
    • Agrawal, A.A.1
  • 3
    • 0344154636 scopus 로고    scopus 로고
    • Phenotypic plasticity and interactions among plants
    • Callaway RM, Pennings SC, Richards CL (2003) Phenotypic plasticity and interactions among plants. Ecology 84, 1115-1128
    • (2003) Ecology , vol.84 , pp. 1115-1128
    • Callaway, R.M.1    Pennings, S.C.2    Richards, C.L.3
  • 4
    • 0023277545 scopus 로고
    • Single-step method of RNA isolation by acid guanidinium thiocyanatephenol-chloroform extraction
    • Chomczynski P, Sacchi N (1987) Single-step method of RNA isolation by acid guanidinium thiocyanatephenol-chloroform extraction. Anal Biochem 162, 156-159
    • (1987) Anal Biochem , vol.162 , pp. 156-159
    • Chomczynski, P.1    Sacchi, N.2
  • 5
    • 11944260974 scopus 로고
    • Octadecanoid precursors of jasmonic acid activate the synthesis of wound-inducible proteinase inhibitors
    • Farmer EE, Ryan CA (1992) Octadecanoid precursors of jasmonic acid activate the synthesis of wound-inducible proteinase inhibitors. The Plant Cell 4, 129-134
    • (1992) The Plant Cell , vol.4 , pp. 129-134
    • Farmer, E.E.1    Ryan, C.A.2
  • 6
    • 28244472834 scopus 로고    scopus 로고
    • Genome complexity and repetitive DNA in metazoans from extreme marine environments
    • Fielman KT, Marsh AG (2005) Genome complexity and repetitive DNA in metazoans from extreme marine environments. Gene 362, 98-108
    • (2005) Gene , vol.362 , pp. 98-108
    • Fielman, K.T.1    Marsh, A.G.2
  • 7
    • 0034004746 scopus 로고    scopus 로고
    • Effect of nutrient enrichment on the complementary (secondary) metabolite composition of the soft coral Sarcophyton ehrenbergi (Cnidaria: Octocorallia: Alcyonaceae) of the Great Barrier Reef
    • Fleury BG, Coll JC, Tentori E, Duquesne S, Figueiredo L (2000) Effect of nutrient enrichment on the complementary (secondary) metabolite composition of the soft coral Sarcophyton ehrenbergi (Cnidaria: Octocorallia: Alcyonaceae) of the Great Barrier Reef. Mar Biol 136, 63-68
    • (2000) Mar Biol , vol.136 , pp. 63-68
    • Fleury, B.G.1    Coll, J.C.2    Tentori, E.3    Duquesne, S.4    Figueiredo, L.5
  • 8
    • 0037974525 scopus 로고    scopus 로고
    • Application of microarray technology in environmental and comparative physiology
    • Gracey AY, Cossins AR (2003) Application of microarray technology in environmental and comparative physiology. Annu Rev Physiol 65, 231-259
    • (2003) Annu Rev Physiol , vol.65 , pp. 231-259
    • Gracey, A.Y.1    Cossins, A.R.2
  • 10
    • 15444368041 scopus 로고    scopus 로고
    • Isolation and characterization of stress-responsive genes from the scleractinian coral Pocillopora damicornis
    • Hashimoto K, Shibuno T, Murayama-Kayano E, Tanaka H, Kayano T (2004) Isolation and characterization of stress-responsive genes from the scleractinian coral Pocillopora damicornis. Coral Reefs 23, 485-491
    • (2004) Coral Reefs , vol.23 , pp. 485-491
    • Hashimoto, K.1    Shibuno, T.2    Murayama-Kayano, E.3    Tanaka, H.4    Kayano, T.5
  • 11
    • 0027063381 scopus 로고
    • The dilemma of plants-to grow or defend
    • Herms DA, Mattson WJ (1992) The dilemma of plants-to grow or defend. Q Rev Biol 67, 283-335
    • (1992) Q Rev Biol , vol.67 , pp. 283-335
    • Herms, D.A.1    Mattson, W.J.2
  • 12
    • 20144382247 scopus 로고    scopus 로고
    • Genomics-fueled approaches to current challenges in marine ecology
    • Hofmann GE, Burnaford JL, Fielman KT (2005) Genomics-fueled approaches to current challenges in marine ecology. Trends Ecol Evol 20, 305-311
    • (2005) Trends Ecol Evol , vol.20 , pp. 305-311
    • Hofmann, G.E.1    Burnaford, J.L.2    Fielman, K.T.3
  • 13
    • 1242271356 scopus 로고    scopus 로고
    • A novel metabolite from the hybrid soft coral Sinularia maxima x Sinularia polydactyla: A biosynthetically mixed skeleton linking cembrane and africanane terpenoids
    • Kamel HN, Fronczek FR, Fischer NH, Slattery M (2004) A novel metabolite from the hybrid soft coral Sinularia maxima x Sinularia polydactyla: a biosynthetically mixed skeleton linking cembrane and africanane terpenoids. Tetrahedr Lett 45, 1995-1997
    • (2004) Tetrahedr Lett , vol.45 , pp. 1995-1997
    • Kamel, H.N.1    Fronczek, F.R.2    Fischer, N.H.3    Slattery, M.4
  • 15
    • 0034703792 scopus 로고    scopus 로고
    • Triterpene glycosides defend the Caribbean reef sponge Erylus formosus from predatory fishes
    • Kubanek J, Pawlik JR, Eve TM, Fenical W (2000) Triterpene glycosides defend the Caribbean reef sponge Erylus formosus from predatory fishes. Mar Ecol Prog Ser 207, 69-77
    • (2000) Mar Ecol Prog Ser , vol.207 , pp. 69-77
    • Kubanek, J.1    Pawlik, J.R.2    Eve, T.M.3    Fenical, W.4
  • 16
    • 0029414665 scopus 로고
    • Chemical consequences of relocation of the soft coral Lobophytum compactum and its placement in contact with the red alga Plocamium hamatum
    • Leone PA, Bowden BF, Carroll AR, Coll JC (1995) Chemical consequences of relocation of the soft coral Lobophytum compactum and its placement in contact with the red alga Plocamium hamatum. Mar Biol 122, 675-679
    • (1995) Mar Biol , vol.122 , pp. 675-679
    • Leone, P.A.1    Bowden, B.F.2    Carroll, A.R.3    Coll, J.C.4
  • 18
    • 21244474086 scopus 로고    scopus 로고
    • Transcriptome profiling of individual larvae of two different developmental modes in the poecilogonous polychaete Streblospio benedicti (Spionidae)
    • Marsh AG, Fielman KT (2005) Transcriptome profiling of individual larvae of two different developmental modes in the poecilogonous polychaete Streblospio benedicti (Spionidae). J Exp Zool 304B, 238-249
    • (2005) J Exp Zool , vol.304 B , pp. 238-249
    • Marsh, A.G.1    Fielman, K.T.2
  • 19
    • 7044226314 scopus 로고    scopus 로고
    • Biochemical composition, energy content, and chemical antifeedant and antifoulant defenses of the colonial Antarctic ascidian Distaplia cylindrica
    • McClintock JB, Amsler MO, Amsler CD, Southworth KJ, Petrie C, Baker BJ (2004) Biochemical composition, energy content, and chemical antifeedant and antifoulant defenses of the colonial Antarctic ascidian Distaplia cylindrica. Mar Biol 145, 885-894
    • (2004) Mar Biol , vol.145 , pp. 885-894
    • McClintock, J.B.1    Amsler, M.O.2    Amsler, C.D.3    Southworth, K.J.4    Petrie, C.5    Baker, B.J.6
  • 20
    • 0032937260 scopus 로고    scopus 로고
    • Control mechanisms of polyphenic development in insects
    • Nijhout HF (1999) Control mechanisms of polyphenic development in insects. BioScience 49, 181-192
    • (1999) BioScience , vol.49 , pp. 181-192
    • Nijhout, H.F.1
  • 21
    • 0001414952 scopus 로고    scopus 로고
    • Utility of natural populations for microarray analyses: Isolation of genes necessary for functional genomic studies
    • Oleksiak MF, Kolell KJ, Crawford DL (2001) Utility of natural populations for microarray analyses: isolation of genes necessary for functional genomic studies. Mar Biotechnol 3, S203-S211
    • (2001) Mar Biotechnol , vol.3
    • Oleksiak, M.F.1    Kolell, K.J.2    Crawford, D.L.3
  • 22
    • 0036789519 scopus 로고    scopus 로고
    • Variation in gene expression within and among natural populations
    • Oleksiak MF, Churchill GA, Crawford DL (2002) Variation in gene expression within and among natural populations. Nat Genet 32, 261-266
    • (2002) Nat Genet , vol.32 , pp. 261-266
    • Oleksiak, M.F.1    Churchill, G.A.2    Crawford, D.L.3
  • 23
    • 11244260808 scopus 로고    scopus 로고
    • Natural variation in cardiac metabolism and gene expression in Fundulus heteroclitus
    • Oleksiak MF, Roach JL, Crawford DL (2005) Natural variation in cardiac metabolism and gene expression in Fundulus heteroclitus. Nat Genet 37, 67-72
    • (2005) Nat Genet , vol.37 , pp. 67-72
    • Oleksiak, M.F.1    Roach, J.L.2    Crawford, D.L.3
  • 24
    • 0033731158 scopus 로고    scopus 로고
    • Inducible chemical resistance to herbivory in the brown seaweed Ascophyllum nodosum
    • Pavia H, Toth GB (2000) Inducible chemical resistance to herbivory in the brown seaweed Ascophyllum nodosum. Ecology 81, 3212-3225
    • (2000) Ecology , vol.81 , pp. 3212-3225
    • Pavia, H.1    Toth, G.B.2
  • 26
    • 3142533071 scopus 로고    scopus 로고
    • Changes in gene expression associated with acclimation to constant temperatures and fluctuating daily temperatures in an annual killifish Austrofundulus limnaeus
    • Podrabsky JE, Somero GN (2004) Changes in gene expression associated with acclimation to constant temperatures and fluctuating daily temperatures in an annual killifish Austrofundulus limnaeus. J Exp Biol 207, 2237-2254
    • (2004) J Exp Biol , vol.207 , pp. 2237-2254
    • Podrabsky, J.E.1    Somero, G.N.2
  • 27
    • 0037448640 scopus 로고    scopus 로고
    • Are there activated chemical defenses in sponges of the genus Aplysina from the Caribbean
    • Puyana M, Fenical W, Pawlik JR (2003) Are there activated chemical defenses in sponges of the genus Aplysina from the Caribbean. Mar Ecol Prog Ser 246, 127-135
    • (2003) Mar Ecol Prog Ser , vol.246 , pp. 127-135
    • Puyana, M.1    Fenical, W.2    Pawlik, J.R.3
  • 28
    • 21744450633 scopus 로고    scopus 로고
    • Predator- and competitor-induced plasticity: How changes in foraging morphology affect phenotypic trade-offs
    • Relyea RA, Auld JR (2005) Predator- and competitor-induced plasticity: how changes in foraging morphology affect phenotypic trade-offs. Ecology 86, 1723-1729
    • (2005) Ecology , vol.86 , pp. 1723-1729
    • Relyea, R.A.1    Auld, J.R.2
  • 30
    • 0027333437 scopus 로고
    • Genetics and evolution of phenotypic plasticity
    • Scheiner SM (1993) Genetics and evolution of phenotypic plasticity. Annu Rev Ecol Syst 24, 35-68
    • (1993) Annu Rev Ecol Syst , vol.24 , pp. 35-68
    • Scheiner, S.M.1
  • 31
    • 84856043672 scopus 로고
    • A mathematical theory of communication
    • Shannon CE (1948) A mathematical theory of communication. Bell Syst Tech J 27, 379-423
    • (1948) Bell Syst Tech J , vol.27 , pp. 379-423
    • Shannon, C.E.1
  • 32
    • 0033678131 scopus 로고    scopus 로고
    • The information content of a character under a Markov model of evolution
    • Shpak M, Churchill GA (2000) The information content of a character under a Markov model of evolution. Mol Phylogenet Evol 17, 231-243
    • (2000) Mol Phylogenet Evol , vol.17 , pp. 231-243
    • Shpak, M.1    Churchill, G.A.2
  • 33
    • 0034938582 scopus 로고    scopus 로고
    • Temporal and spatial variation in defensive metabolites of the tropical Pacific soft corals Sinularia maxima and S. polydactyla
    • Slattery M, Starmer J, Paul VJ (2001) Temporal and spatial variation in defensive metabolites of the tropical Pacific soft corals Sinularia maxima and S. polydactyla. Mar Biol 138, 1183-1193
    • (2001) Mar Biol , vol.138 , pp. 1183-1193
    • Slattery, M.1    Starmer, J.2    Paul, V.J.3
  • 34
    • 0034067849 scopus 로고    scopus 로고
    • Evolution in stressful environments. I. Phenotypic variability, phenotypic selection, and response to selection in five distinct environmental stresses
    • Stanton ML, Roy BA, Thiede DA (2000) Evolution in stressful environments. I. Phenotypic variability, phenotypic selection, and response to selection in five distinct environmental stresses. Evolution 54, 93-111
    • (2000) Evolution , vol.54 , pp. 93-111
    • Stanton, M.L.1    Roy, B.A.2    Thiede, D.A.3
  • 36
    • 0031976531 scopus 로고    scopus 로고
    • Specificity of induced resistance in the tomato, Lycopersicon esculentum
    • Stout MJ, Workman KV, Bostock RM, Duffey SS (1998) Specificity of induced resistance in the tomato, Lycopersicon esculentum. Oecologia 113, 74-81
    • (1998) Oecologia , vol.113 , pp. 74-81
    • Stout, M.J.1    Workman, K.V.2    Bostock, R.M.3    Duffey, S.S.4
  • 37
    • 31944434789 scopus 로고    scopus 로고
    • Evolution of a polyphenism by genetic accomodation
    • Suzuki Y, Nijhout HF (2006) Evolution of a polyphenism by genetic accomodation. Science 311, 650-652
    • (2006) Science , vol.311 , pp. 650-652
    • Suzuki, Y.1    Nijhout, H.F.2
  • 38
    • 0036939751 scopus 로고    scopus 로고
    • Tissue-specific induction of herbivore resistance: Seaweed response to amphipod grazing
    • Taylor RB, Sotka E, Hay ME (2002) Tissue-specific induction of herbivore resistance: seaweed response to amphipod grazing. Oecologia 132, 68-76
    • (2002) Oecologia , vol.132 , pp. 68-76
    • Taylor, R.B.1    Sotka, E.2    Hay, M.E.3
  • 39
    • 0032765708 scopus 로고    scopus 로고
    • Trade-offs in plant defense against pathogens and herbivores: A field demonstration of chemical elicitors of induced resistance
    • Thaler JS, Fidantsef AL, Duffey SS, Bostock RM (1999) Trade-offs in plant defense against pathogens and herbivores: a field demonstration of chemical elicitors of induced resistance. J Chem Ecol 25, 1597-1609
    • (1999) J Chem Ecol , vol.25 , pp. 1597-1609
    • Thaler, J.S.1    Fidantsef, A.L.2    Duffey, S.S.3    Bostock, R.M.4
  • 40
    • 3342951235 scopus 로고    scopus 로고
    • Genomics for the ecological toolbox
    • Thomas MA, Klaper R (2004) Genomics for the ecological toolbox. Trends Ecol Evol 19, 439-445
    • (2004) Trends Ecol Evol , vol.19 , pp. 439-445
    • Thomas, M.A.1    Klaper, R.2
  • 41
    • 15244349376 scopus 로고    scopus 로고
    • Inducible and constitutive defenses of valuable seaweed tissues: Consequences for herbivore fitness
    • Toth GB, Langhamer O, Pavia H (2005) Inducible and constitutive defenses of valuable seaweed tissues: consequences for herbivore fitness. Ecology 86, 612-618
    • (2005) Ecology , vol.86 , pp. 612-618
    • Toth, G.B.1    Langhamer, O.2    Pavia, H.3
  • 42
    • 0030066258 scopus 로고    scopus 로고
    • Phenotypic plasticity in an intertidal snail: The role of a common crab predator
    • Trussell GC (1996) Phenotypic plasticity in an intertidal snail: the role of a common crab predator. Evolution 50, 448-454
    • (1996) Evolution , vol.50 , pp. 448-454
    • Trussell, G.C.1
  • 43
    • 0035804617 scopus 로고    scopus 로고
    • Activated defense systems in marine macroalgae: Evidence for an ecological role for DMSP cleavage
    • Van Alstyne KL, Wolfe GV, Freidenburg TL, Neill A, Hicken C (2001) Activated defense systems in marine macroalgae: evidence for an ecological role for DMSP cleavage. Mar Ecol Prog Ser 213, 53-65
    • (2001) Mar Ecol Prog Ser , vol.213 , pp. 53-65
    • Van Alstyne, K.L.1    Wolfe, G.V.2    Freidenburg, T.L.3    Neill, A.4    Hicken, C.5
  • 44
    • 84957881514 scopus 로고
    • Science and complexity
    • Weaver W (1948) Science and complexity. Am Scientist 36, 536
    • (1948) Am Scientist , vol.36 , pp. 536
    • Weaver, W.1
  • 45
    • 33645754491 scopus 로고    scopus 로고
    • Neutral and adaptive variation in gene expression
    • Whitehead A, Crawford DL (2006a) Neutral and adaptive variation in gene expression. Proc Natl Acad Sci USA 103, 5425-5430
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 5425-5430
    • Whitehead, A.1    Crawford, D.L.2
  • 46
    • 33645524495 scopus 로고    scopus 로고
    • Variation within and among species in gene expression: Raw material for evolution
    • Whitehead A, Crawford DL (2006b) Variation within and among species in gene expression: raw material for evolution. Mol Ecol 15, 1197-1211
    • (2006) Mol Ecol , vol.15 , pp. 1197-1211
    • Whitehead, A.1    Crawford, D.L.2
  • 47
    • 0029769692 scopus 로고    scopus 로고
    • The probability of attack and patterns of constitutive and induced defense: A test of optimal defense theory
    • Zangerl AR, Rutledge CE (1996) The probability of attack and patterns of constitutive and induced defense: a test of optimal defense theory. Am Natur 147, 599-608
    • (1996) Am Natur , vol.147 , pp. 599-608
    • Zangerl, A.R.1    Rutledge, C.E.2


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