-
1
-
-
0025294528
-
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
-
Amann RI, Binder BJ, Olson RJ, Chisholm SW, Devereux R, Stahl DA (1990) Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl Environ Microbiol 56: 1919-1925
-
(1990)
Appl Environ Microbiol
, vol.56
, pp. 1919-1925
-
-
Amann, R.I.1
Binder, B.J.2
Olson, R.J.3
Chisholm, S.W.4
Devereux, R.5
Stahl, D.A.6
-
2
-
-
0023249322
-
Hydrogen and carbon isotope fractionation during experimental production of bacterial methane
-
Balabane M, Galimov E, Hermann M, Letolle R (1987) Hydrogen and carbon isotope fractionation during experimental production of bacterial methane. Org Geochem 11: 115-119
-
(1987)
Org Geochem
, vol.11
, pp. 115-119
-
-
Balabane, M.1
Galimov, E.2
Hermann, M.3
Letolle, R.4
-
3
-
-
0041814390
-
Methane as a source of carbon and energy for lake pelagic food webs
-
Bastviken D, Ejlertsson J, Sundh I, Tranvik L (2003) Methane as a source of carbon and energy for lake pelagic food webs. Ecology 84:969-981
-
(2003)
Ecology
, vol.84
, pp. 969-981
-
-
Bastviken, D.1
Ejlertsson, J.2
Sundh, I.3
Tranvik, L.4
-
4
-
-
0001148765
-
Methanogenic bacteria from the Bondyuzhskoe oil field: General characterization and analysis of stable-carbon isotopic fractionation
-
Belyaev SS, Wolkin R, Kenealy WR, DeNiro MJ, Epstein S, Zeikus JG (1983) Methanogenic bacteria from the Bondyuzhskoe oil field: general characterization and analysis of stable-carbon isotopic fractionation. Appl Environ Microbiol 45:691-697
-
(1983)
Appl Environ Microbiol
, vol.45
, pp. 691-697
-
-
Belyaev, S.S.1
Wolkin, R.2
Kenealy, W.R.3
DeNiro, M.J.4
Epstein, S.5
Zeikus, J.G.6
-
5
-
-
0001264927
-
Larval food and feeding behaviour
-
Armitage PD, Cranston PS, Pinder LCV eds, Chapman & Hall, London, p
-
Berg MG (1995) Larval food and feeding behaviour. In: Armitage PD, Cranston PS, Pinder LCV (eds) The Chironomidae: biology and ecology of non-biting midges. Chapman & Hall, London, p 1-54
-
(1995)
The Chironomidae: Biology and ecology of non-biting midges
, pp. 1-54
-
-
Berg, M.G.1
-
6
-
-
0027800707
-
What sources of organic carbon drive food webs in billabongs? A study based on stable isotope analysis
-
Bunn SE, Boon PI (1993) What sources of organic carbon drive food webs in billabongs? A study based on stable isotope analysis. Oecologia 96:85-94
-
(1993)
Oecologia
, vol.96
, pp. 85-94
-
-
Bunn, S.E.1
Boon, P.I.2
-
7
-
-
0005651733
-
Conclusions
-
Armitage PD, Cranston PS, Pinder LCV eds, Chapman & Hall, London, p
-
Coffman WP (1995) Conclusions. In: Armitage PD, Cranston PS, Pinder LCV (eds) The Chironomidae: biology and ecology of non-biting midges. Chapman & Hall, London, p 297-338
-
(1995)
The Chironomidae: Biology and ecology of non-biting midges
, pp. 297-338
-
-
Coffman, W.P.1
-
8
-
-
33750204800
-
Site specific methane production and subsequent midge mediation within Esthwaite Water, UK
-
Deines P, Grey J (2006) Site specific methane production and subsequent midge mediation within Esthwaite Water, UK. Arch Hydrobiol 167:317-334
-
(2006)
Arch Hydrobiol
, vol.167
, pp. 317-334
-
-
Deines, P.1
Grey, J.2
-
10
-
-
0029014177
-
Characterization of chemoautotrophic bacterial symbionts in a gutless marine worm (Oligochaeta, Annelida) by phylogenetic 16s rRNA sequence analysis in in situ hybridization
-
Dubilier N, Giere O, Distel DL, Cavanaugh CM (1995) Characterization of chemoautotrophic bacterial symbionts in a gutless marine worm (Oligochaeta, Annelida) by phylogenetic 16s rRNA sequence analysis in in situ hybridization. Appl Environ Microbiol 61:2346-2350
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 2346-2350
-
-
Dubilier, N.1
Giere, O.2
Distel, D.L.3
Cavanaugh, C.M.4
-
11
-
-
0242544069
-
Microbial community structure in midgut and hindgut of the humus-feeding larva of Pachnoda phippiata (Coleoptera: Scarabaeidae)
-
Egert M, Lemke T, Wagner B, Brune A, Friedrich MW (2003) Microbial community structure in midgut and hindgut of the humus-feeding larva of Pachnoda phippiata (Coleoptera: Scarabaeidae). Appl Environ Microbiol 69: 6659-6668
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 6659-6668
-
-
Egert, M.1
Lemke, T.2
Wagner, B.3
Brune, A.4
Friedrich, M.W.5
-
12
-
-
0035339207
-
Group-specific 16S rRNA targeted probes for the detection of type I and type II methanotrophs by fluorescence in situ hybridisation
-
Eller G, Stubner S, Frenzel P (2001) Group-specific 16S rRNA targeted probes for the detection of type I and type II methanotrophs by fluorescence in situ hybridisation. FEMS Microbiol Lett 198:91-97
-
(2001)
FEMS Microbiol Lett
, vol.198
, pp. 91-97
-
-
Eller, G.1
Stubner, S.2
Frenzel, P.3
-
13
-
-
0034668694
-
C-13 and N-15 depletion in components of a foodweb from an ephemeral boreal wetland compared to boreal lakes: Putative evidence for microbial processes
-
France RL, Schlaepfer MA (2000) C-13 and N-15 depletion in components of a foodweb from an ephemeral boreal wetland compared to boreal lakes: putative evidence for microbial processes. Hydrobiologia 439:1-6
-
(2000)
Hydrobiologia
, vol.439
, pp. 1-6
-
-
France, R.L.1
Schlaepfer, M.A.2
-
14
-
-
0025197440
-
Evidence from carbon isotope measurements for diverse origins of sedimentary hydrocarbons
-
Freeman KH, Hayes JM, Trendel JM, Albrecht P (1990) Evidence from carbon isotope measurements for diverse origins of sedimentary hydrocarbons. Nature 343:254-256
-
(1990)
Nature
, vol.343
, pp. 254-256
-
-
Freeman, K.H.1
Hayes, J.M.2
Trendel, J.M.3
Albrecht, P.4
-
15
-
-
0000460751
-
The influence of chironomid larvae on sediment oxygen microprofiles
-
Frenzel P (1990) The influence of chironomid larvae on sediment oxygen microprofiles. Arch Hydrobiol 119:427-437
-
(1990)
Arch Hydrobiol
, vol.119
, pp. 427-437
-
-
Frenzel, P.1
-
16
-
-
0018366635
-
Carbon isotope fractionation by Methanobacterium thermoautotrophicum
-
Fuchs G, Thauer R, Ziegler H, Stichler W (1979) Carbon isotope fractionation by Methanobacterium thermoautotrophicum. Microbiology 120:135-139
-
(1979)
Microbiology
, vol.120
, pp. 135-139
-
-
Fuchs, G.1
Thauer, R.2
Ziegler, H.3
Stichler, W.4
-
17
-
-
0031656240
-
Fatty acid biomarkers show dietary differences between dominant chironomid taxa in Lake Erken
-
Goedkoop W, Sonesten L, Markensten H, Ahlgren G (1998) Fatty acid biomarkers show dietary differences between dominant chironomid taxa in Lake Erken. Freshw Biol 40: 135-143
-
(1998)
Freshw Biol
, vol.40
, pp. 135-143
-
-
Goedkoop, W.1
Sonesten, L.2
Markensten, H.3
Ahlgren, G.4
-
18
-
-
0001120969
-
Influence of Chironomus plumosus larvae on the oxygen uptake of sediment
-
Graneli W (1979) Influence of Chironomus plumosus larvae on the oxygen uptake of sediment. Arch Hydrobiol 87: 385-403
-
(1979)
Arch Hydrobiol
, vol.87
, pp. 385-403
-
-
Graneli, W.1
-
19
-
-
0742290797
-
A chironomid conundrum: Queries arising from stable isotopes
-
Grey J (2002) A chironomid conundrum: queries arising from stable isotopes. Verh Int Ver Limnol 28:102-105
-
(2002)
Verh Int Ver Limnol
, vol.28
, pp. 102-105
-
-
Grey, J.1
-
20
-
-
23744513853
-
Differential assimilation of methanotrophic and chemoautotrophic bacteria by lake chironomid larvae
-
Grey J, Deines P (2005) Differential assimilation of methanotrophic and chemoautotrophic bacteria by lake chironomid larvae. Aquat Microb Ecol 40:61-66
-
(2005)
Aquat Microb Ecol
, vol.40
, pp. 61-66
-
-
Grey, J.1
Deines, P.2
-
21
-
-
0742302387
-
High intraspecific variability in carbon and nitrogen stable isotope ratios of lake chironomid larvae
-
Grey J, Kelly A, Jones RI (2004a) High intraspecific variability in carbon and nitrogen stable isotope ratios of lake chironomid larvae. Limnol Oceanogr 49:239-244
-
(2004)
Limnol Oceanogr
, vol.49
, pp. 239-244
-
-
Grey, J.1
Kelly, A.2
Jones, R.I.3
-
22
-
-
2542522425
-
Seasonal changes in the stable isotope values of lake-dwelling chironomid larvae in relation to feeding and life cycle variability
-
Grey J, Kelly A, Ward S, Sommerwerk N, Jones RI (2004b) Seasonal changes in the stable isotope values of lake-dwelling chironomid larvae in relation to feeding and life cycle variability. Freshw Biol 49:681-689
-
(2004)
Freshw Biol
, vol.49
, pp. 681-689
-
-
Grey, J.1
Kelly, A.2
Ward, S.3
Sommerwerk, N.4
Jones, R.I.5
-
23
-
-
0028334728
-
Methane production in terrestrial arthropods
-
Hackstein JH, Stumm CK (1994) Methane production in terrestrial arthropods. Publ Nebraska Acad Sci 91:5441-5445
-
(1994)
Publ Nebraska Acad Sci
, vol.91
, pp. 5441-5445
-
-
Hackstein, J.H.1
Stumm, C.K.2
-
25
-
-
0032925877
-
Molecular analyses of the methane-oxidizing microbial community in rice field soil by targeting the genes of the 16S rRNA, particulate methane monooxygenase, and methanol dehydrogenase
-
Henckel T, Friedrich M, Conrad R (1999) Molecular analyses of the methane-oxidizing microbial community in rice field soil by targeting the genes of the 16S rRNA, particulate methane monooxygenase, and methanol dehydrogenase. Appl Environ Microbiol 65:1980-1990
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 1980-1990
-
-
Henckel, T.1
Friedrich, M.2
Conrad, R.3
-
26
-
-
0035666135
-
13C of sedimentary carbon in eutrophic Lake Mendota (USA): New models for interpreting isotopic excursions in the sedimentary record
-
13C of sedimentary carbon in eutrophic Lake Mendota (USA): new models for interpreting isotopic excursions in the sedimentary record. Geochim Cosmochim Acta 65:4321-4337
-
(2001)
Geochim Cosmochim Acta
, vol.65
, pp. 4321-4337
-
-
Hollander, D.J.1
Smith, M.A.2
-
27
-
-
0037231805
-
Carbon isotopic fractionation by archaeans and other thermophilic prokaryotes
-
House CH, Schopf JW, Stetter KO (2003) Carbon isotopic fractionation by archaeans and other thermophilic prokaryotes. Org Geochem 34:345-356
-
(2003)
Org Geochem
, vol.34
, pp. 345-356
-
-
House, C.H.1
Schopf, J.W.2
Stetter, K.O.3
-
28
-
-
0032779587
-
Carbon isotopic fractionation in lipids from methanotrophic bacteria. II: The effects of physiology and environmental parameters on the biosynthesis and isotopic signatures of biomarkers
-
Jahnke LL, Summons RE, Hope JM, des Marais DJ (1999) Carbon isotopic fractionation in lipids from methanotrophic bacteria. II: The effects of physiology and environmental parameters on the biosynthesis and isotopic signatures of biomarkers. Geochim Cosmochim Acta 63:79-93
-
(1999)
Geochim Cosmochim Acta
, vol.63
, pp. 79-93
-
-
Jahnke, L.L.1
Summons, R.E.2
Hope, J.M.3
des Marais, D.J.4
-
29
-
-
0022213161
-
Feeding efficiencies of Chironomus plumosus (L.) and C. anthracinus Zett. (Diptera: Chironomidae) in mesotrophic Lake Erken
-
Johnson RK (1985) Feeding efficiencies of Chironomus plumosus (L.) and C. anthracinus Zett. (Diptera: Chironomidae) in mesotrophic Lake Erken. Freshw Biol 15:605-612
-
(1985)
Freshw Biol
, vol.15
, pp. 605-612
-
-
Johnson, R.K.1
-
30
-
-
0024925168
-
Interactions between Chironomus plumosus (L.) and the microbial community in surficial sediments of a shallow, eutrophic lake
-
Johnson RK, Bostrom B, van de Bund W (1989) Interactions between Chironomus plumosus (L.) and the microbial community in surficial sediments of a shallow, eutrophic lake. Limnol Oceanogr 34:992-1003
-
(1989)
Limnol Oceanogr
, vol.34
, pp. 992-1003
-
-
Johnson, R.K.1
Bostrom, B.2
van de Bund, W.3
-
31
-
-
0032994201
-
Stable isotope analysis of zooplankton carbon nutrition in humic lakes
-
Jones RI, Grey J, Sleep D, Arvola L (1999) Stable isotope analysis of zooplankton carbon nutrition in humic lakes. Oikos 86:97-104
-
(1999)
Oikos
, vol.86
, pp. 97-104
-
-
Jones, R.I.1
Grey, J.2
Sleep, D.3
Arvola, L.4
-
32
-
-
0032966242
-
The effect of chironomid larvae on production, oxidation and fluxes of methane in a flooded rice soil
-
Kajan R, Frenzel P (1999) The effect of chironomid larvae on production, oxidation and fluxes of methane in a flooded rice soil. FEMS Microbiol Ecol 28:121-129
-
(1999)
FEMS Microbiol Ecol
, vol.28
, pp. 121-129
-
-
Kajan, R.1
Frenzel, P.2
-
33
-
-
0027460327
-
Monitoring the enrichment and isolation of sulfate-reducing bacteria by using oligonucleotide hybridisation probes designed from environmentally derived 16S rRNA sequences
-
Kane MD, Poulsen LK, Stahl DA (1993) Monitoring the enrichment and isolation of sulfate-reducing bacteria by using oligonucleotide hybridisation probes designed from environmentally derived 16S rRNA sequences. Appl Environ Microbiol 59:682-686
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 682-686
-
-
Kane, M.D.1
Poulsen, L.K.2
Stahl, D.A.3
-
34
-
-
2542534031
-
Stable isotope analysis provides fresh insights into dietary separation between Chironomus anthracinus and C. plumosus
-
Kelly A, Jones RI, Grey J (2004) Stable isotope analysis provides fresh insights into dietary separation between Chironomus anthracinus and C. plumosus. J North Am Benthol Soc 23:287-296
-
(2004)
J North Am Benthol Soc
, vol.23
, pp. 287-296
-
-
Kelly, A.1
Jones, R.I.2
Grey, J.3
-
35
-
-
0035972958
-
Contribution of methanotrophs to freshwater macroinvertebrates: Evidence from stable isotope ratios
-
Kiyashko SI, Narita T, Wada E (2001) Contribution of methanotrophs to freshwater macroinvertebrates: evidence from stable isotope ratios. Aquat Microb Ecol 24:203-207
-
(2001)
Aquat Microb Ecol
, vol.24
, pp. 203-207
-
-
Kiyashko, S.I.1
Narita, T.2
Wada, E.3
-
36
-
-
9744282708
-
Fatty acid composition of aquatic insect larvae Stictochironomus pictulus (Diptera: Chironomidae): evidence of feeding upon methanotrophic bacteria
-
Kiyashko SI, Imbs AB, Narita T, Svetashev VI, Wada E (2004) Fatty acid composition of aquatic insect larvae Stictochironomus pictulus (Diptera: Chironomidae): evidence of feeding upon methanotrophic bacteria. Comp Biochem Physiol 139:705-711
-
(2004)
Comp Biochem Physiol
, vol.139
, pp. 705-711
-
-
Kiyashko, S.I.1
Imbs, A.B.2
Narita, T.3
Svetashev, V.I.4
Wada, E.5
-
38
-
-
4243176787
-
Stream food web fueled by methane-derived carbon
-
Kohzu A, Kato C, Iwata T, Kishi D, Murakami M, Nakano S, Wada E (2004) Stream food web fueled by methane-derived carbon. Aquat Microb Ecol 36:189-194
-
(2004)
Aquat Microb Ecol
, vol.36
, pp. 189-194
-
-
Kohzu, A.1
Kato, C.2
Iwata, T.3
Kishi, D.4
Murakami, M.5
Nakano, S.6
Wada, E.7
-
39
-
-
0028163776
-
Assimilation of inorganic nitrogen by marine invertebrates and their chemoautotrophic and methanotrophic symbionts
-
Lee RW, Childress JJ (1994) Assimilation of inorganic nitrogen by marine invertebrates and their chemoautotrophic and methanotrophic symbionts. Appl Environ Microbiol 60:1852-1858
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 1852-1858
-
-
Lee, R.W.1
Childress, J.J.2
-
41
-
-
0842266326
-
Enhanced sensitivity of DNA- and rRNA-based stable isotope probing by fractionation and quantitative analysis of isopycnic centrifugation gradients
-
Lüders T, Manefield M, Friedrich MW (2004) Enhanced sensitivity of DNA- and rRNA-based stable isotope probing by fractionation and quantitative analysis of isopycnic centrifugation gradients. Environ Microbiol 6:73-78
-
(2004)
Environ Microbiol
, vol.6
, pp. 73-78
-
-
Lüders, T.1
Manefield, M.2
Friedrich, M.W.3
-
42
-
-
2542523843
-
-
Ludwig W, Strunk O, Westram R, Richter L and 28 others (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32:1363-1371
-
Ludwig W, Strunk O, Westram R, Richter L and 28 others (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32:1363-1371
-
-
-
-
43
-
-
1642516826
-
Some effects of tube shape on the feeding of Chironomus plumosus L. (Diptera: Chironomidae)
-
McLachlan AJ (1977) Some effects of tube shape on the feeding of Chironomus plumosus L. (Diptera: Chironomidae). J Anim Ecol 46:139-146
-
(1977)
J Anim Ecol
, vol.46
, pp. 139-146
-
-
McLachlan, A.J.1
-
44
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer G, De Waal EC, Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59:695-700
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
De Waal, E.C.2
Uitterlinden, A.G.3
-
45
-
-
0036276618
-
Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria
-
Pernthaler A, Pernthaler J, Amann R (2002) Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria. Appl Environ Microbiol 68:3094-3101
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 3094-3101
-
-
Pernthaler, A.1
Pernthaler, J.2
Amann, R.3
-
46
-
-
0035037092
-
-
Phillips DL, Gregg JW (2001) Uncertainty in source partitioning using stable isotopes. Oecologia 128:171-179 (see also Erratum, Oecologia 128:304)
-
Phillips DL, Gregg JW (2001) Uncertainty in source partitioning using stable isotopes. Oecologia 128:171-179 (see also Erratum, Oecologia 128:304)
-
-
-
-
47
-
-
0142136145
-
Phylogenetic diversity, abundance, and axial distribution of microorganisms in the intestinal tract of two soil-feeding termites (Cubitermes spp.)
-
Schmitt-Wagner D, Friedrich MW, Wagner B, Brune A (2003) Phylogenetic diversity, abundance, and axial distribution of microorganisms in the intestinal tract of two soil-feeding termites (Cubitermes spp.). Appl Environ Microbiol 69: 6007-6017
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 6007-6017
-
-
Schmitt-Wagner, D.1
Friedrich, M.W.2
Wagner, B.3
Brune, A.4
-
48
-
-
13844318523
-
Methanogenic symbionts of anaerobic ciliates and their contribution to methanogenesis in an anoxic rice field soil
-
Schwarz MVJ, Frenzel P (2005) Methanogenic symbionts of anaerobic ciliates and their contribution to methanogenesis in an anoxic rice field soil. FEMS Microbiol Ecol 52:93-99
-
(2005)
FEMS Microbiol Ecol
, vol.52
, pp. 93-99
-
-
Schwarz, M.V.J.1
Frenzel, P.2
-
49
-
-
23944506540
-
Chemosynthetic endosymbioses: Adaptations to oxic-anoxic interfaces
-
Stewart FJ, Newton ILG, Cavanaugh CM (2005) Chemosynthetic endosymbioses: adaptations to oxic-anoxic interfaces. Trends Microbiol 13:439-448
-
(2005)
Trends Microbiol
, vol.13
, pp. 439-448
-
-
Stewart, F.J.1
Newton, I.L.G.2
Cavanaugh, C.M.3
-
50
-
-
0037087929
-
Bioturbation effects of Chironomus riparius on the benthic N-cycle as measured using microsensors and microbiological assays
-
Stief P, de Beer D (2002) Bioturbation effects of Chironomus riparius on the benthic N-cycle as measured using microsensors and microbiological assays. Aquat Microb Ecol 27: 175-185
-
(2002)
Aquat Microb Ecol
, vol.27
, pp. 175-185
-
-
Stief, P.1
de Beer, D.2
-
52
-
-
0028668166
-
Carbon isotopic fractionation in lipids from methanotrophic bacteria: Relevance for interpretation of the geochemical record of biomarkers
-
Summons R, Jahnke LL, Roksandic Z (1994) Carbon isotopic fractionation in lipids from methanotrophic bacteria: relevance for interpretation of the geochemical record of biomarkers. Geochim Cosmochim Acta 58:2853-63
-
(1994)
Geochim Cosmochim Acta
, vol.58
, pp. 2853-2863
-
-
Summons, R.1
Jahnke, L.L.2
Roksandic, Z.3
-
53
-
-
0030847643
-
Influence of Chironomus plumosus larvae on ammonium flux and denitrification (measured by acetylene blockage- and the isotope pairing-technique) in eutrophic lake sediment
-
Svensson JM (1997) Influence of Chironomus plumosus larvae on ammonium flux and denitrification (measured by acetylene blockage- and the isotope pairing-technique) in eutrophic lake sediment. Hydrobiologia 346:157-168
-
(1997)
Hydrobiologia
, vol.346
, pp. 157-168
-
-
Svensson, J.M.1
-
55
-
-
20444459154
-
Niche heterogeneity determines bacterial community structure in the termite gut (Reticulitermes santonensis)
-
Yang H, Schmitt-Wagner D, Stingl U, Brune A (2005) Niche heterogeneity determines bacterial community structure in the termite gut (Reticulitermes santonensis). Environ Microbiol 7:916-932
-
(2005)
Environ Microbiol
, vol.7
, pp. 916-932
-
-
Yang, H.1
Schmitt-Wagner, D.2
Stingl, U.3
Brune, A.4
|