메뉴 건너뛰기




Volumn 23, Issue 6, 2007, Pages 732-738

Genomic characterization of multiple clinical phenotypes of cancer using multivariate linear regression models

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BLADDER CANCER; CANCER STAGING; CONTROLLED STUDY; GENE EXPRESSION; GENE IDENTIFICATION; GENOMICS; HUMAN; HUMAN TISSUE; LINEAR REGRESSION ANALYSIS; MICROARRAY ANALYSIS; MULTIVARIATE ANALYSIS; PHENOTYPE; PRIORITY JOURNAL; SCREENING;

EID: 34147113864     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btl663     Document Type: Article
Times cited : (6)

References (26)
  • 1
    • 0000501656 scopus 로고
    • Information theory and an extension of the maximum likelihood principle
    • Petrov B.N. and Caski F eds, Akademia Kiado, Budapest, pp
    • Akaike,H. (1973) Information theory and an extension of the maximum likelihood principle. In Petrov B.N. and Caski F (eds.) Second International Sympositon on Information Theory. Akademia Kiado, Budapest, pp. 267-281.
    • (1973) Second International Sympositon on Information Theory , pp. 267-281
    • Akaike, H.1
  • 2
    • 0034948896 scopus 로고    scopus 로고
    • A Bayesian framework for the analysis of microarray expression data: Regularized t-test and statistical inferences of gene changes
    • Baldi,P. and Long,A.D. (2001) A Bayesian framework for the analysis of microarray expression data: Regularized t-test and statistical inferences of gene changes. Bioinformatics, 17, 509-519.
    • (2001) Bioinformatics , vol.17 , pp. 509-519
    • Baldi, P.1    Long, A.D.2
  • 3
    • 27744557285 scopus 로고    scopus 로고
    • Selecting genes by test statistics
    • Chen,D. et al. (2005) Selecting genes by test statistics. J. Biomed. Biotechnol., 2005, 132-138.
    • (2005) J. Biomed. Biotechnol , vol.2005 , pp. 132-138
    • Chen, D.1
  • 4
    • 0842304289 scopus 로고    scopus 로고
    • Bacteria-induced intestinal cancer in mice with disrupted Gpx1 and Gpx2 genes
    • Chu,F.F. et al. (2004) Bacteria-induced intestinal cancer in mice with disrupted Gpx1 and Gpx2 genes. Cancer Res., 64, 962-968.
    • (2004) Cancer Res , vol.64 , pp. 962-968
    • Chu, F.F.1
  • 5
    • 0036126861 scopus 로고    scopus 로고
    • A systematic statistical linear modeling approach to oligonucleotide array experiments
    • Chu,T.M. et al. (2002) A systematic statistical linear modeling approach to oligonucleotide array experiments. Math. Biosci., 176, 35-51.
    • (2002) Math. Biosci , vol.176 , pp. 35-51
    • Chu, T.M.1
  • 6
    • 0036855402 scopus 로고    scopus 로고
    • Comparison of microarray designs for class comparison and class discovery
    • Dobbin,K. and Simon,R. (2002) Comparison of microarray designs for class comparison and class discovery. Bioinformatics, 18, 1438-1445.
    • (2002) Bioinformatics , vol.18 , pp. 1438-1445
    • Dobbin, K.1    Simon, R.2
  • 7
    • 0043203327 scopus 로고    scopus 로고
    • Multiple hypothesis testing in microarray experiments
    • Dudoit,S. et al. (2003) Multiple hypothesis testing in microarray experiments. Stat. Sci., 18, 71-103.
    • (2003) Stat. Sci , vol.18 , pp. 71-103
    • Dudoit, S.1
  • 8
    • 1542784653 scopus 로고    scopus 로고
    • Empirical Bayes analysis of a microarray experiment
    • Efron,B. et al. (2001) Empirical Bayes analysis of a microarray experiment. J. Am. Stat. Assoc., 96, 1151-1160.
    • (2001) J. Am. Stat. Assoc , vol.96 , pp. 1151-1160
    • Efron, B.1
  • 9
    • 0017280570 scopus 로고
    • The analysis and selection of variables in linear regression
    • Hocking,R.R. (1976) The analysis and selection of variables in linear regression. Biometrics, 32, 1-49.
    • (1976) Biometrics , vol.32 , pp. 1-49
    • Hocking, R.R.1
  • 10
    • 0035032570 scopus 로고    scopus 로고
    • Statistical design and the analysis of gene expression microarray data
    • Kerr,M.K. and Churchill,G.A. (2001) Statistical design and the analysis of gene expression microarray data. Genet. Res., 77, 123-128.
    • (2001) Genet. Res , vol.77 , pp. 123-128
    • Kerr, M.K.1    Churchill, G.A.2
  • 11
    • 0034927555 scopus 로고    scopus 로고
    • Analysis of variance for gene expression microarray data
    • Kerr,M.K. et al. (2000) Analysis of variance for gene expression microarray data. J. Comput. Biol., 7, 819-837.
    • (2000) J. Comput. Biol , vol.7 , pp. 819-837
    • Kerr, M.K.1
  • 12
    • 19944391545 scopus 로고    scopus 로고
    • High throughput functional genomics: Identification of novel genes with tumor suppressor phenotypes
    • Koenig-Hoffmann,K. et al. (2005) High throughput functional genomics: Identification of novel genes with tumor suppressor phenotypes. Int. J. Cancer, 113, 434-439.
    • (2005) Int. J. Cancer , vol.113 , pp. 434-439
    • Koenig-Hoffmann, K.1
  • 13
    • 84915425007 scopus 로고
    • Some comments on Cp
    • Mallows,C.L. (1973) Some comments on Cp. Technometrics, 15, 661-676.
    • (1973) Technometrics , vol.15 , pp. 661-676
    • Mallows, C.L.1
  • 14
    • 33747349895 scopus 로고    scopus 로고
    • Statistical applications using DNA microarrays for cancer diagnosis and prognosis
    • Crowley J.J. and Ankerst D.P, eds, 2nd edn. CRC Press, Boca Raton, pp
    • Matsui,S. (2006) Statistical applications using DNA microarrays for cancer diagnosis and prognosis. In Crowley J.J. and Ankerst D.P. (eds.) Handbook of Statistics in Clinical Oncology. 2nd edn. CRC Press, Boca Raton, pp. 419-436.
    • (2006) Handbook of Statistics in Clinical Oncology , pp. 419-436
    • Matsui, S.1
  • 15
    • 0344844479 scopus 로고    scopus 로고
    • Regulation of extracellular matrix metalloproteinase inducer and matrix metalloproteinase expression by Amphiregulin in transformed human breast epithelial cells
    • Menashi,S. et al. (2003) Regulation of extracellular matrix metalloproteinase inducer and matrix metalloproteinase expression by Amphiregulin in transformed human breast epithelial cells. Cancer Res., 63, 7575-7580.
    • (2003) Cancer Res , vol.63 , pp. 7575-7580
    • Menashi, S.1
  • 16
    • 2542418023 scopus 로고    scopus 로고
    • Identifying superficial, muscle-invasive, and metastasizing transitional cell carcinoma of the bladder: Use of cDNA array analysis of gene expression profiles
    • Modlich,O. et al. (2004) Identifying superficial, muscle-invasive, and metastasizing transitional cell carcinoma of the bladder: Use of cDNA array analysis of gene expression profiles. Clin. Cancer. Res. 10, 3410-3421.
    • (2004) Clin. Cancer. Res , vol.10 , pp. 3410-3421
    • Modlich, O.1
  • 17
    • 34147102507 scopus 로고
    • Prediction sum of squares, Akaike's information criteria and doubly-adjusted multiple correlation coefficient
    • Okuno,T. et al. (1977) Prediction sum of squares, Akaike's information criteria and doubly-adjusted multiple correlation coefficient. Bull. Int. Stat. Inst., 47, 370-373.
    • (1977) Bull. Int. Stat. Inst , vol.47 , pp. 370-373
    • Okuno, T.1
  • 18
    • 0037881525 scopus 로고    scopus 로고
    • Gene discovery in bladder cancer progression using cDNA microarrays
    • Sanchez-Carbayo,M. et al. (2003) Gene discovery in bladder cancer progression using cDNA microarrays. Am. J. Pathol., 163, 505-516.
    • (2003) Am. J. Pathol , vol.163 , pp. 505-516
    • Sanchez-Carbayo, M.1
  • 20
    • 2942642114 scopus 로고    scopus 로고
    • Digital expression profiles of human endogenous retroviral families in normal and cancerous tissues
    • Stauffer,Y. et al. (2004) Digital expression profiles of human endogenous retroviral families in normal and cancerous tissues. Cancer Immun., 4, 2.
    • (2004) Cancer Immun , vol.4 , pp. 2
    • Stauffer, Y.1
  • 21
    • 0036020892 scopus 로고    scopus 로고
    • A direct approach to false discovery rates
    • Storey,J.D. (2002) A direct approach to false discovery rates. J. Roy. Stati. Soc., B64, 479-498.
    • (2002) J. Roy. Stati. Soc , vol.B64 , pp. 479-498
    • Storey, J.D.1
  • 22
    • 21644468913 scopus 로고    scopus 로고
    • RNA binding motif (RBM) proteins: A novel family of apoptosis modulators?
    • Sutherland,L.C. et al. (2005) RNA binding motif (RBM) proteins: A novel family of apoptosis modulators? J. Cell Biochem., 94, 5-24.
    • (2005) J. Cell Biochem , vol.94 , pp. 5-24
    • Sutherland, L.C.1
  • 23
    • 0035881981 scopus 로고    scopus 로고
    • A subclass of HER1 ligands are prognostic markers for survival in bladder cancer patients
    • Thogersen,V.B. et al. (2001) A subclass of HER1 ligands are prognostic markers for survival in bladder cancer patients. Cancer Res., 61, 6227-6233.
    • (2001) Cancer Res , vol.61 , pp. 6227-6233
    • Thogersen, V.B.1
  • 24
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher,V.G. et al. (2001) Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. USA, 98, 5116-5121.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 5116-5121
    • Tusher, V.G.1
  • 25
    • 0348143180 scopus 로고    scopus 로고
    • A random variance model for detection of differential gene expression in small microarray experiments
    • Wright,G.W. and Simon,R.M. (2003) A random variance model for detection of differential gene expression in small microarray experiments. Bioinformatics, 19, 2448-2455.
    • (2003) Bioinformatics , vol.19 , pp. 2448-2455
    • Wright, G.W.1    Simon, R.M.2
  • 26
    • 0035687554 scopus 로고    scopus 로고
    • Assessing gene significance from cDNA microarray expression data via mixed models
    • Wolfinger,R.D. et al. (2001) Assessing gene significance from cDNA microarray expression data via mixed models. J. Comput. Biol., 8, 625-637.
    • (2001) J. Comput. Biol , vol.8 , pp. 625-637
    • Wolfinger, R.D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.