메뉴 건너뛰기




Volumn 2006, Issue , 2006, Pages 3439-3444

Bifurcation analysis of the metabolism of E. coli at optimal enzyme levels

Author keywords

[No Author keywords available]

Indexed keywords

ENZYMES; ESCHERICHIA COLI; HOPF BIFURCATION; STABILITY;

EID: 34047228840     PISSN: 07431619     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/acc.2006.1657250     Document Type: Conference Paper
Times cited : (5)

References (23)
  • 2
    • 0023995387 scopus 로고
    • MPS: An artificially intelligent software system for the analysis and synthesis of metabolic pathways
    • A. Seressiotis and J. E. Bailey, "MPS: an artificially intelligent software system for the analysis and synthesis of metabolic pathways," Biotechnol Bioeng, vol. 31, pp. 587-602, 1988.
    • (1988) Biotechnol Bioeng , vol.31 , pp. 587-602
    • Seressiotis, A.1    Bailey, J.E.2
  • 3
    • 0031214696 scopus 로고    scopus 로고
    • Flux amplification in complex metabolic networks
    • G. Stephanopoulos and T. W. Simpson, "Flux amplification in complex metabolic networks," Chemical Engineering Science, vol. 52, pp. 2607-2627, 1997.
    • (1997) Chemical Engineering Science , vol.52 , pp. 2607-2627
    • Stephanopoulos, G.1    Simpson, T.W.2
  • 4
    • 0033136109 scopus 로고    scopus 로고
    • Metabolic pathway analysis: Basic concepts and scientific applications in the post-genomic era
    • C. H. Schilling, S. Schuster, B. O. Palsson, and R. Heinrich, "Metabolic pathway analysis: basic concepts and scientific applications in the post-genomic era," Biotechnol Prog, vol. 15, pp. 296-303, 1999.
    • (1999) Biotechnol Prog , vol.15 , pp. 296-303
    • Schilling, C.H.1    Schuster, S.2    Palsson, B.O.3    Heinrich, R.4
  • 5
    • 0033080396 scopus 로고    scopus 로고
    • Detection of elementary flux modes in biochemical networks: A promising tool for pathway analysis and metabolic engineering
    • S. Schuster, T. Dandekar, and D. A. Fell, "Detection of elementary flux modes in biochemical networks: a promising tool for pathway analysis and metabolic engineering," Trends Biotechnol, vol. 17, pp. 53-60, 1999.
    • (1999) Trends Biotechnol , vol.17 , pp. 53-60
    • Schuster, S.1    Dandekar, T.2    Fell, D.A.3
  • 6
    • 0037304679 scopus 로고    scopus 로고
    • Analysis of metabolic capabilities using singular value decomposition of extreme pathway matrices
    • N. D. Price, J. L. Reed, J. A. Papin, I. Famili, and B. O. Palsson, "Analysis of metabolic capabilities using singular value decomposition of extreme pathway matrices," Biophys J, vol. 84, pp. 794-804, 2003.
    • (2003) Biophys J , vol.84 , pp. 794-804
    • Price, N.D.1    Reed, J.L.2    Papin, J.A.3    Famili, I.4    Palsson, B.O.5
  • 7
    • 0347762731 scopus 로고    scopus 로고
    • Exploring the overproduction of amino acids using the bilevel optimization framework OptKnock
    • P. Pharkya, A. P. Burgard, and C. D. Maranas, "Exploring the overproduction of amino acids using the bilevel optimization framework OptKnock," Biotechnol Bioeng, vol. 84, pp. 887-99, 2003.
    • (2003) Biotechnol Bioeng , vol.84 , pp. 887-899
    • Pharkya, P.1    Burgard, A.P.2    Maranas, C.D.3
  • 10
    • 6044260198 scopus 로고    scopus 로고
    • Optimal re-design of primary metabolism in Escherichia coli using linlog kinetics
    • D. Visser, J. W. Schmid, K. Mauch, M. Reuss, and J. J. Heijnen, "Optimal re-design of primary metabolism in Escherichia coli using linlog kinetics," Metab Eng, vol. 6, pp. 378-90, 2004.
    • (2004) Metab Eng , vol.6 , pp. 378-390
    • Visser, D.1    Schmid, J.W.2    Mauch, K.3    Reuss, M.4    Heijnen, J.J.5
  • 14
    • 15844406532 scopus 로고    scopus 로고
    • Metabolic flux analysis of Escherichia coli in glucose-limited continuous culture. II. Dynamic response to famine and feast, activation of the methylglyoxal pathway and oscillatory behaviour
    • J. Weber, A. Kayser, and U. Rinas, "Metabolic flux analysis of Escherichia coli in glucose-limited continuous culture. II. Dynamic response to famine and feast, activation of the methylglyoxal pathway and oscillatory behaviour," Microbiology-Sgm, vol. 151, pp. 707-716, 2005.
    • (2005) Microbiology-Sgm , vol.151 , pp. 707-716
    • Weber, J.1    Kayser, A.2    Rinas, U.3
  • 15
    • 1442354192 scopus 로고    scopus 로고
    • Multistability in the lactose utilization network of Escherichia coli
    • E. M. Ozbudak, M. Thattai, H. N. Lim, B. I. Shraiman, and A. van Oudenaarden, "Multistability in the lactose utilization network of Escherichia coli," Nature, vol. 427, pp. 737-740, 2004.
    • (2004) Nature , vol.427 , pp. 737-740
    • Ozbudak, E.M.1    Thattai, M.2    Lim, H.N.3    Shraiman, B.I.4    van Oudenaarden, A.5
  • 16
    • 0015736484 scopus 로고
    • Steady state multiplicity and stability of enzymatic reactions
    • D. D. J. E. B. Bruns, D. Luss, "Steady state multiplicity and stability of enzymatic reactions," Biotechnol Bioeng, vol. 15, pp. 1131-1145, 1973.
    • (1973) Biotechnol Bioeng , vol.15 , pp. 1131-1145
    • Bruns, D.D.J.E.B.1    Luss, D.2
  • 17
    • 0031213576 scopus 로고    scopus 로고
    • Studies on glycolysis .1. Multiple steady states in bacterial glycolysis
    • V. Hatzimanikatis and J. E. Bailey, "Studies on glycolysis .1. Multiple steady states in bacterial glycolysis," Chemical Engineering Science, vol. 52, pp. 2579-2588, 1997.
    • (1997) Chemical Engineering Science , vol.52 , pp. 2579-2588
    • Hatzimanikatis, V.1    Bailey, J.E.2
  • 18
    • 0035656416 scopus 로고    scopus 로고
    • Network dynamics and cell physiology
    • J. J. Tyson, K. Chen, and B. Novak, "Network dynamics and cell physiology," Nat Rev Mol Cell Biol, vol. 2, pp. 908-16, 2001.
    • (2001) Nat Rev Mol Cell Biol , vol.2 , pp. 908-916
    • Tyson, J.J.1    Chen, K.2    Novak, B.3
  • 19
    • 0031879114 scopus 로고    scopus 로고
    • Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells
    • A. Arkin, J. Ross, and H. H. McAdams, "Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells," Genetics, vol. 149, pp. 1633-48, 1998.
    • (1998) Genetics , vol.149 , pp. 1633-1648
    • Arkin, A.1    Ross, J.2    McAdams, H.H.3
  • 20
    • 7044246187 scopus 로고    scopus 로고
    • Stability and dissipativity theory for nonnegative dynamical systems: A unified analysis framework for biological and physiological systems
    • W. M. Haddad and V. Chellaboina, "Stability and dissipativity theory for nonnegative dynamical systems: a unified analysis framework for biological and physiological systems," Nonlinear Analysis-Real World Applications, vol. 6, pp. 35-65, 2005.
    • (2005) Nonlinear Analysis-Real World Applications , vol.6 , pp. 35-65
    • Haddad, W.M.1    Chellaboina, V.2
  • 21
    • 0005467961 scopus 로고    scopus 로고
    • Computer-aided design of metabolic networks
    • Rawlings, J, Ogunnaike, T, Eaton, J, Eds
    • K. Mauch, S. Buziol, J. Schmid, and M. Reuss, "Computer-aided design of metabolic networks. In Rawlings, J., Ogunnaike, T., Eaton, J. (Eds.)," AICHE Symposium Series, vol. 98, pp. 82-91, 2002.
    • (2002) AICHE Symposium Series , vol.98 , pp. 82-91
    • Mauch, K.1    Buziol, S.2    Schmid, J.3    Reuss, M.4
  • 22
    • 0027641824 scopus 로고
    • Stabilization of unstable procedures: The recursive projection method
    • G. M. Shroff, and H.B. Keller, "Stabilization of unstable procedures: The recursive projection method.," SIAM Journal on Numerical Analysis, vol. 30, pp. 1099-1120, 1993.
    • (1993) SIAM Journal on Numerical Analysis , vol.30 , pp. 1099-1120
    • Shroff, G.M.1    Keller, H.B.2
  • 23
    • 0023206975 scopus 로고
    • Role of continuation in engineering analysis
    • R. Seydel, and Hlavacek, V., "Role of continuation in engineering analysis," Chemical Engineering Science, vol. 42, pp. 1281-1295, 1987.
    • (1987) Chemical Engineering Science , vol.42 , pp. 1281-1295
    • Seydel, R.1    Hlavacek, V.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.