-
1
-
-
30944462801
-
Cycles of chromosome instability are associated with a fragile site and are increased by defects in DNA replication and checkpoint controls in yeast
-
Admire, A., Shanks, L., Danzl, N., Wang, M., Weier, U., Stevens, W., Hunt, E., and Weinert, T. 2006. Cycles of chromosome instability are associated with a fragile site and are increased by defects in DNA replication and checkpoint controls in yeast. Genes & Dev. 20: 159-173.
-
(2006)
Genes & Dev
, vol.20
, pp. 159-173
-
-
Admire, A.1
Shanks, L.2
Danzl, N.3
Wang, M.4
Weier, U.5
Stevens, W.6
Hunt, E.7
Weinert, T.8
-
2
-
-
0024446858
-
Catalysis by the RNA subunit of RNase P - A minireview
-
Altman, S., Baer, M.F., Bartkiewicz, M., Gold, H., Guerrier-Takada, C., Kirsebom, L.A., Lumelsky, N., and Peck, K. 1989. Catalysis by the RNA subunit of RNase P - A minireview. Gene 82: 63-64.
-
(1989)
Gene
, vol.82
, pp. 63-64
-
-
Altman, S.1
Baer, M.F.2
Bartkiewicz, M.3
Gold, H.4
Guerrier-Takada, C.5
Kirsebom, L.A.6
Lumelsky, N.7
Peck, K.8
-
3
-
-
0028331525
-
Phenotypic suppression of DNA gyrase deficiencies by a deletion lowering the gene dosage of a major tRNA in Salmonella typhimurium
-
Blanc-Potard, A.B. and Bossi, L. 1994. Phenotypic suppression of DNA gyrase deficiencies by a deletion lowering the gene dosage of a major tRNA in Salmonella typhimurium. J. Bacteriol. 176: 2216-2226.
-
(1994)
J. Bacteriol
, vol.176
, pp. 2216-2226
-
-
Blanc-Potard, A.B.1
Bossi, L.2
-
4
-
-
0038120874
-
The DEAD-box RNA helicase SrmB is involved in the assembly of 50S ribosomal subunits in Escherichia coli
-
Charollais, J., Pflieger, D., Vinh, J., Dreyfus, M., and Iost, I. 2003. The DEAD-box RNA helicase SrmB is involved in the assembly of 50S ribosomal subunits in Escherichia coli. Mol. Microbiol. 48: 1253-1265.
-
(2003)
Mol. Microbiol
, vol.48
, pp. 1253-1265
-
-
Charollais, J.1
Pflieger, D.2
Vinh, J.3
Dreyfus, M.4
Iost, I.5
-
5
-
-
2542557396
-
CsdA, a cold-shock RNA helicase from Escherichia coli, is involved in the biogenesis of 50S ribosomal subunit
-
Charollais, J., Dreyfus, M., and Iost, I. 2004. CsdA, a cold-shock RNA helicase from Escherichia coli, is involved in the biogenesis of 50S ribosomal subunit. Nucleic Acids Res. 32: 2751-2759.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 2751-2759
-
-
Charollais, J.1
Dreyfus, M.2
Iost, I.3
-
6
-
-
0027960812
-
Role of the AGA/AGG codons, the rarest codons in global gene expression in Escherichia coli
-
Chen, G.T. and Inouye, M. 1994. Role of the AGA/AGG codons, the rarest codons in global gene expression in Escherichia coli. Genes & Dev. 8: 2641-2652.
-
(1994)
Genes & Dev
, vol.8
, pp. 2641-2652
-
-
Chen, G.T.1
Inouye, M.2
-
7
-
-
0029740114
-
DNA replication fork pause sites dependent on transcription
-
Deshpande, A.M. and Newlon, C.S. 1996. DNA replication fork pause sites dependent on transcription. Science 272: 1030-1033.
-
(1996)
Science
, vol.272
, pp. 1030-1033
-
-
Deshpande, A.M.1
Newlon, C.S.2
-
8
-
-
32644435694
-
Degradation of RNA in bacteria: Comparison of mRNA and stable RNA
-
Deutscher, M.P. 2006. Degradation of RNA in bacteria: Comparison of mRNA and stable RNA. Nucleic Acids Res. 34: 659-666.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 659-666
-
-
Deutscher, M.P.1
-
9
-
-
0034657405
-
An evolutionarily conserved RNA stem-loop functions as a sensor that directs feedback regulation of RNase E gene expression
-
Diwa, A., Bricker, A.L., Jain, C., and Belasco, J.G. 2000. An evolutionarily conserved RNA stem-loop functions as a sensor that directs feedback regulation of RNase E gene expression. Genes & Dev. 14: 1249-1260.
-
(2000)
Genes & Dev
, vol.14
, pp. 1249-1260
-
-
Diwa, A.1
Bricker, A.L.2
Jain, C.3
Belasco, J.G.4
-
10
-
-
0030564828
-
Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates
-
Dong, H., Nilsson, L., and Kurland, C.G. 1996. Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates. J. Mol. Biol. 260: 649-663.
-
(1996)
J. Mol. Biol
, vol.260
, pp. 649-663
-
-
Dong, H.1
Nilsson, L.2
Kurland, C.G.3
-
11
-
-
0018857218
-
The structure and aminoacylation of a temperature-sensitive tRNATrp (Escherichia coli)
-
Eisenberg, S.P. and Yarus, M. 1980. The structure and aminoacylation of a temperature-sensitive tRNATrp (Escherichia coli). J. Biol. Chem. 255: 1128-1137.
-
(1980)
J. Biol. Chem
, vol.255
, pp. 1128-1137
-
-
Eisenberg, S.P.1
Yarus, M.2
-
12
-
-
0022504959
-
The E. coli dnaY gene encodes an arginine transfer RNA
-
Garcia, G.M., Mar, P.K., Mullin, D.A., Walker, J.R., and Prather, N.E. 1986. The E. coli dnaY gene encodes an arginine transfer RNA. Cell 45: 453-459.
-
(1986)
Cell
, vol.45
, pp. 453-459
-
-
Garcia, G.M.1
Mar, P.K.2
Mullin, D.A.3
Walker, J.R.4
Prather, N.E.5
-
13
-
-
22244456758
-
The pseudouridine synthase RluD is required for normal ribosome assembly and function in Escherichia coli
-
Gutgsell, N.S., Deutscher, M.P., and Ofengand, J. 2005. The pseudouridine synthase RluD is required for normal ribosome assembly and function in Escherichia coli. RNA 11: 1141-1152.
-
(2005)
RNA
, vol.11
, pp. 1141-1152
-
-
Gutgsell, N.S.1
Deutscher, M.P.2
Ofengand, J.3
-
14
-
-
26644472197
-
Unwinding of the nascent lagging strand by Rep and PriA enables the direct restart of stalled replication forks
-
Heller, R.C. and Marians, K.J. 2005. Unwinding of the nascent lagging strand by Rep and PriA enables the direct restart of stalled replication forks. J. Biol. Chem. 280: 34143-34151.
-
(2005)
J. Biol. Chem
, vol.280
, pp. 34143-34151
-
-
Heller, R.C.1
Marians, K.J.2
-
15
-
-
0018603542
-
Isolation and characterization of dnaX and dnaY temperature-sensitive mutants of Escherichia coli
-
Henson, J.M., Chu, H., Irwin, C.A., and Walker, J.R. 1979. Isolation and characterization of dnaX and dnaY temperature-sensitive mutants of Escherichia coli. Genetics 92: 1041-1059.
-
(1979)
Genetics
, vol.92
, pp. 1041-1059
-
-
Henson, J.M.1
Chu, H.2
Irwin, C.A.3
Walker, J.R.4
-
16
-
-
0022589865
-
Codon usage and gene expression
-
Holm, L. 1986. Codon usage and gene expression. Nucleic Acids Res. 14: 3075-3087.
-
(1986)
Nucleic Acids Res
, vol.14
, pp. 3075-3087
-
-
Holm, L.1
-
17
-
-
0348047594
-
The Saccharomyces cerevisiae helicase Rrm3p facilitates replication past nonhistone protein-DNA complexes
-
Ivessa, A.S., Lenzmeier, B.A., Bessler, J.B., Goudsouzian, L.K., Schnakenberg, S.L., and Zakian, V.A. 2003. The Saccharomyces cerevisiae helicase Rrm3p facilitates replication past nonhistone protein-DNA complexes. Mol. Cell 12: 1525-1536.
-
(2003)
Mol. Cell
, vol.12
, pp. 1525-1536
-
-
Ivessa, A.S.1
Lenzmeier, B.A.2
Bessler, J.B.3
Goudsouzian, L.K.4
Schnakenberg, S.L.5
Zakian, V.A.6
-
18
-
-
0036231777
-
Consequences of RNase E scarcity in Escherichia coli
-
Jain, C., Deana, A., and Belasco, J.G. 2002. Consequences of RNase E scarcity in Escherichia coli. Mol. Microbiol. 43: 1053-1064.
-
(2002)
Mol. Microbiol
, vol.43
, pp. 1053-1064
-
-
Jain, C.1
Deana, A.2
Belasco, J.G.3
-
19
-
-
0028804911
-
Effects of rare codon clusters on high-level expression of heterologous proteins in Escherichia coli
-
Kane, J.F. 1995. Effects of rare codon clusters on high-level expression of heterologous proteins in Escherichia coli. Curr. Opin. Biotechnol. 6: 494-500.
-
(1995)
Curr. Opin. Biotechnol
, vol.6
, pp. 494-500
-
-
Kane, J.F.1
-
20
-
-
0021347298
-
RNase III cleavage is obligate for maturation but not for function of Escherichia coli pre-23S rRNA
-
King, T.C., Sirdeshmukh, R., and Schlessinger, D. 1984. RNase III cleavage is obligate for maturation but not for function of Escherichia coli pre-23S rRNA. Proc. Natl. Acad. Sci. 81: 185-188.
-
(1984)
Proc. Natl. Acad. Sci
, vol.81
, pp. 185-188
-
-
King, T.C.1
Sirdeshmukh, R.2
Schlessinger, D.3
-
21
-
-
0022981322
-
Nucleolytic processing of ribonucleic acid transcripts in procaryotes
-
King, T.C., Sirdeskmukh, R., and Schlessinger, D. 1986. Nucleolytic processing of ribonucleic acid transcripts in procaryotes. Microbiol. Rev. 50: 428-451.
-
(1986)
Microbiol. Rev
, vol.50
, pp. 428-451
-
-
King, T.C.1
Sirdeskmukh, R.2
Schlessinger, D.3
-
22
-
-
0024206114
-
Differential effects of mutations in the protein and RNA moieties of RNase P on the efficiency of suppression by various tRNA suppressors
-
Kirsebom, L.A., Baer, M.F., and Altman, S. 1988. Differential effects of mutations in the protein and RNA moieties of RNase P on the efficiency of suppression by various tRNA suppressors. J. Mol. Biol. 204: 879-888.
-
(1988)
J. Mol. Biol
, vol.204
, pp. 879-888
-
-
Kirsebom, L.A.1
Baer, M.F.2
Altman, S.3
-
23
-
-
0032189275
-
DNA gyrase and topoisomerase IV: Biochemical activities, physiological roles during chromosome replication, and drug sensitivities
-
Levine, C., Hiasa, H., and Marians, K.J. 1998. DNA gyrase and topoisomerase IV: Biochemical activities, physiological roles during chromosome replication, and drug sensitivities. Biochim. Biophys. Acta 1400: 29-43.
-
(1998)
Biochim. Biophys. Acta
, vol.1400
, pp. 29-43
-
-
Levine, C.1
Hiasa, H.2
Marians, K.J.3
-
24
-
-
0036500552
-
RNA quality control: Degradation of defective transfer RNA
-
Li, Z., Reimers, S., Pandit, S., and Deutscher, M.P. 2002. RNA quality control: Degradation of defective transfer RNA. EMBO J. 21: 1132-1138.
-
(2002)
EMBO J
, vol.21
, pp. 1132-1138
-
-
Li, Z.1
Reimers, S.2
Pandit, S.3
Deutscher, M.P.4
-
25
-
-
0030743084
-
The effects of mutations in the rpmB,G operon of Escherichia coli on ribosome assembly and ribosomal protein synthesis
-
Maguire, B.A. and Wild, D.G. 1997. The effects of mutations in the rpmB,G operon of Escherichia coli on ribosome assembly and ribosomal protein synthesis. Biochim. Biophys. Acta 1353: 137-147.
-
(1997)
Biochim. Biophys. Acta
, vol.1353
, pp. 137-147
-
-
Maguire, B.A.1
Wild, D.G.2
-
26
-
-
0029100702
-
A new set of useful cloning and expression vectors derived from pBlueScript
-
Mayer, M.P. 1995. A new set of useful cloning and expression vectors derived from pBlueScript. Gene 163: 41-46.
-
(1995)
Gene
, vol.163
, pp. 41-46
-
-
Mayer, M.P.1
-
27
-
-
33645775569
-
An algorithmic framework for genome-wide modeling and analysis of translation networks
-
Mehra, A. and Hatzimanikatis, V. 2006. An algorithmic framework for genome-wide modeling and analysis of translation networks. Biophys. J. 90: 1136-1146.
-
(2006)
Biophys. J
, vol.90
, pp. 1136-1146
-
-
Mehra, A.1
Hatzimanikatis, V.2
-
28
-
-
4344668509
-
Translation arrest of SecM is essential for the basal and regulated expression of SecA
-
Murakami, A., Nakatogawa, H., and Ito, K. 2004. Translation arrest of SecM is essential for the basal and regulated expression of SecA. Proc. Natl. Acad. Sci. 101: 12330-12335.
-
(2004)
Proc. Natl. Acad. Sci
, vol.101
, pp. 12330-12335
-
-
Murakami, A.1
Nakatogawa, H.2
Ito, K.3
-
29
-
-
0021155247
-
Regulation of the synthesis of ribosomes and ribosomal components
-
Nomura, M., Gourse, R., and Baughman, G. 1984. Regulation of the synthesis of ribosomes and ribosomal components. Annu. Rev. Biochem. 53: 75-117.
-
(1984)
Annu. Rev. Biochem
, vol.53
, pp. 75-117
-
-
Nomura, M.1
Gourse, R.2
Baughman, G.3
-
30
-
-
0742289608
-
Use of computer-designed group II introns to disrupt Escherichia coli DExH/D-box protein and DNA helicase genes
-
Perutka, J., Wang, W., Goerlitz, D., and Lambowitz, A.M. 2004. Use of computer-designed group II introns to disrupt Escherichia coli DExH/D-box protein and DNA helicase genes. J. Mol. Biol. 336: 421-439.
-
(2004)
J. Mol. Biol
, vol.336
, pp. 421-439
-
-
Perutka, J.1
Wang, W.2
Goerlitz, D.3
Lambowitz, A.M.4
-
31
-
-
1542344429
-
DEAD-box proteins: The driving forces behind RNA metabolism
-
Rocak, S. and Linder, P. 2004. DEAD-box proteins: The driving forces behind RNA metabolism. Nat. Rev. Mol. Cell Biol. 5: 232-241.
-
(2004)
Nat. Rev. Mol. Cell Biol
, vol.5
, pp. 232-241
-
-
Rocak, S.1
Linder, P.2
-
32
-
-
0033575660
-
SsrA-mediated peptide tagging caused by rare codons and tRNA scarcity
-
Roche, E.D. and Sauer, R.T. 1999. SsrA-mediated peptide tagging caused by rare codons and tRNA scarcity. EMBO J. 18: 4579-4589.
-
(1999)
EMBO J
, vol.18
, pp. 4579-4589
-
-
Roche, E.D.1
Sauer, R.T.2
-
33
-
-
4344642721
-
The Escherichia coli argU10(Ts) phenotype is caused by a reduction in the cellular level of the argU tRNA for the rare codons AGA and AGG
-
Sakamoto, K., Ishimaru, S., Kobayashi, T., Walker, J.R., and Yokoyama, S. 2004. The Escherichia coli argU10(Ts) phenotype is caused by a reduction in the cellular level of the argU tRNA for the rare codons AGA and AGG. J. Bacteriol. 186: 5899-5905.
-
(2004)
J. Bacteriol
, vol.186
, pp. 5899-5905
-
-
Sakamoto, K.1
Ishimaru, S.2
Kobayashi, T.3
Walker, J.R.4
Yokoyama, S.5
-
34
-
-
0016387796
-
Accumulation of 30S preribosomal ribonucleic acid in an Escherichia coli mutant treated with chloramphenicol
-
Schlessinger, D., Ono, M., Nikolaev, N., and Silengo, L. 1974. Accumulation of 30S preribosomal ribonucleic acid in an Escherichia coli mutant treated with chloramphenicol. Biochemistry 13: 4268-4271.
-
(1974)
Biochemistry
, vol.13
, pp. 4268-4271
-
-
Schlessinger, D.1
Ono, M.2
Nikolaev, N.3
Silengo, L.4
-
35
-
-
27644437758
-
Rep helicase suppresses short-homology-dependent illegitimate recombination in Escherichia coli
-
Shiraishi, K., Imai, Y., Yoshizaki, S., and Ikeda, H. 2005. Rep helicase suppresses short-homology-dependent illegitimate recombination in Escherichia coli. Genes Cells 10: 1015-1023.
-
(2005)
Genes Cells
, vol.10
, pp. 1015-1023
-
-
Shiraishi, K.1
Imai, Y.2
Yoshizaki, S.3
Ikeda, H.4
-
36
-
-
0023767492
-
Coregulation of processing and translation: Mature 59′ termini of Escherichia coli 23S ribosomal RNA form in polysomes
-
Srivastava, A.K. and Schlessinger, D. 1988. Coregulation of processing and translation: Mature 59′ termini of Escherichia coli 23S ribosomal RNA form in polysomes. Proc. Natl. Acad. Sci. 85: 7144-7148.
-
(1988)
Proc. Natl. Acad. Sci
, vol.85
, pp. 7144-7148
-
-
Srivastava, A.K.1
Schlessinger, D.2
-
37
-
-
0025153770
-
Mechanism and regulation of bacterial ribosomal RNA processing
-
Srivastava, A.K. and Schlessinger, D. 1990. Mechanism and regulation of bacterial ribosomal RNA processing. Annu. Rev. Microbiol. 44: 105-129.
-
(1990)
Annu. Rev. Microbiol
, vol.44
, pp. 105-129
-
-
Srivastava, A.K.1
Schlessinger, D.2
-
38
-
-
0034857262
-
DExD/H box RNA helicases: From generic motors to specific dissociation functions
-
Tanner, N.K. and Linder, P. 2001. DExD/H box RNA helicases: From generic motors to specific dissociation functions. Mol. Cell 8: 251-262.
-
(2001)
Mol. Cell
, vol.8
, pp. 251-262
-
-
Tanner, N.K.1
Linder, P.2
-
39
-
-
0037321039
-
After the ribosome structures: How are the subunits assembled?
-
Williamson, J.R. 2003. After the ribosome structures: How are the subunits assembled? RNA 9: 165-167.
-
(2003)
RNA
, vol.9
, pp. 165-167
-
-
Williamson, J.R.1
|