Chemotaxonomical identification of spores of macrofungi: Possibilities of Raman spectroscopy

Analytical and Bioanalytical Chemistry

Volumn 387, Issue 8, 2007, Pages 2823-2832

  De Gussem, Kris ^a   Vandenabeele, Peter ^a   Verbeken, Annemieke ^a   Moens, Luc ^a  

^a GHENT UNIVERSITY   (Belgium)

Author keywords

Basidiomycotina; Chemotaxonomy; Genus identification; Raman spectroscopy

Indexed keywords

LIPIDS; MOLECULAR STRUCTURE; PROTEINS; RAMAN SPECTROSCOPY; SPECTRUM ANALYSIS;

BASIDIOSPORES; COLLYBIA; CONFOCAL RAMAN SPECTROSCOPY; LINEAR DISCRIMINANT ANALYSIS; SPORES;

FUNGI;

ARTICLE; CALIBRATION; CHEMISTRY; CLASSIFICATION; FUNGUS; FUNGUS SPORE; METHODOLOGY; PHYSIOLOGY; RAMAN SPECTROMETRY;

CALIBRATION; FUNGI; SPECTRUM ANALYSIS, RAMAN; SPORES, FUNGAL;

BACTERIA (MICROORGANISMS); BASIDIOMYCOTA; COLLYBIA; GYMNOPUS; LACCARIA; LACTARIUS; MYCENA; RUSSULA;

EID: 33947606350     PISSN: 16182642     EISSN: 16182650     Source Type: Journal    
DOI: 10.1007/s00216-007-1150-1     Document Type: Article

References (40)

1. Brondz I, Holland K, Ekeberg D (2004) J Chromatogr B 800:303-307
2. Mohaček-Grošev V, Božac R, Puppels GJ (2001) Spectrochim Act A 57:2815-2829
3. Alexopoulos CJ, Mims CW, Blackwell M (1996) Introductory mycology, 4th edn. Wiley, New York
4. Carlile MJ, Watkinson SC (1994) The fungi. Academic press, London
5. Couto MMB, Eijsma B, Hofstra H, Huis in't Veld JHJ, van der Vossen JMBM (1996) Appl Environm Microbiol 62(1):41-46
6. Horton TR, Bruns TD (2001) Mol Ecol 10:1855-1871
7. Pelletier MJ (1999) Analytical applications of Raman spectroscopy. Blackwell Science, Oxford
8. De Gussem K, Vandenabeele P, Verbeken A, Moens L (2005) Spectrochim Act A 61(13-14):2896-2908
9. Huang YS, Karashima T, Yamamoto M, Hamaguchii H (2003) J Raman Spectrosc 34(1):1-3
10. Rösch P, Harz M, Schmitt M, Popp J (2005) J Raman Spectrosc 36(5):377-379
11. Rösch P, Harz M, Peschke KD, Ronneberger O, Burkhardt H, Popp J (2006) Biopolymers 82(4):312-316
12. Ibelings MS, Maquelin K, Endtz HP, Bruining HA, Puppels GJ (2005) Clin Microbiol Infect 11(5):353-358
13. Maquelin K, Choo-Smith LP, Endtz HP, Bruining HA, Puppels GJ (2002) J Clin Microbiol 40(2):594-600
14. Maquelin K, Kirschner C, Choo-Smith LP, Ngo-Thi NA, van Vreeswijk T, Stammler M, Endtz HP, Bruining HA, Naumann D, Puppels GJ (2003) J Clin Microbiol 41(1):324-329
15. Edwards HGM, Newton EM, Wynn-Williams DD, Lewis-Smith RI (2003) Spectrochim Act A 59(10):2301-2309
16. Villar SEJ, Edwards HGM, Seaward MRD (2004) Spectrochim Act A 60(5):1229-1237
17. Carey PR (1999) J Biol Chem 274(38):26625-26628
18. Hutsebaut D, Vandroemme J, Heyrman J, Dawyndt P, Vandenabeele P, Moens L, de Vos P (2006) Syst Appl Microbiol 29(8):650-660
19. Jarvis RM, Goodacre R (2004) Anal Chem 76(1):40-47
20. Oust A, Moretro T, Naterstad K, Sockalingum GD, Adt I, Manfait M, Kohler A (2006) Appl Environ Microbiol 72(1):228-232
21. Rösch P, Harz M, Schmitt M, Peschke KD, Ronneberger O, Burkhardt H, Motzkus HW, Lankers M, Hofer S, Thiele H, Popp J (2005) Appl Environ Microbiol 71(3):1626-1637
22. Wenning M, Seiler H, Scherer S (2002) Appl Environ Microbiol 68(10):4717-4721
23. Goodacre R, Timmins EM, Rooney PJ, Rowland JJ, Kell DB (1996) Ferns Microbiol Lett 140(2-3):233-239
24. Irudayaraj J, Yang H, Sakhamuri S (2002) J Mol Struct 606(1-3):181-188
25. Lay JO (2000) Trac-Trend Anal Chem 19(8):507-516
26. Ruelle V, El Moualij B, Zorzi W, Ledent P, De Pauw E (2004) Rapid Commun Mass Spectrom 18(18):2013-2019
27. Himmelreich U, Somorjai RL, Dolenko B, Lee OC, Daniel HM, Murray R, Mountford CE, Sorrell TC (2003) Appl Environ Microbiol 69(8):4566-4574
28. Kirk PM, Cannon PF, David JC, Stalpers JA (2001) Dictionary of the fungi, 9th edn. Cabi Bioscience
29. Hutsebaut D, Vandenabeele P, Moens L (2005) Analyst 130 (8):1204-1214
30. Vladimir A, Noordeloos ME (1997) A monograph of Marasmius, Collybia and related genera in Europe, part 2. IHW-Verlag & Verlagsbuchhandlung, München
31. Martens H (2003) The EMSC toolbox for MATLAB. http://www. models.kvl.dk/sourcc/emsctoolbox
32. PLS toolbox for matlab. Eigenvector Research, Wenatchee
33. Kiefte M (1999) Discriminant analysis toolbox, version 0.3. http:// www.mathworks.com/matlabcentral/fileexchangc/loadFile.do? objectId=189
34. Barnes RJ, Dhanoa MS, Lister SJ (1989) Appl Spectrosc 43 (5):772-777
35. Savitsky A, Golay MJE (1964) Anal Chem 36(8):1627-1639
36. Martens H, Stark E (1991) J Pharmac Biomed Anal 9(8):625-635
37. Socrates G (2001) Infrared and Raman characteristic group frequencies - tables and charts. Wiley, Chichester
38. Maquelin K, Kirschner C, Choo-Smith LP, van den Braak N, Endtz HPh, Naumann D, Puppels GJ (2002) J Microbiol Methods 51:255-271
39. Huang WE, Griffiths RI, Thompson IP, Bailey MJ, Whiteley AS (2004) Anal Chem 76(15):4452-4458
40. Hutsebaut D, Maquelin K, De Vos P, Vandenabeele P, Moens L, Puppels GJ (2004) Anal Chem 76(21):6274-6281