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Volumn 69, Issue 8, 2003, Pages 4566-4574

Rapid identification of Candida species by using nuclear magnetic resonance spectroscopy and a statistical classification strategy

Author keywords

[No Author keywords available]

Indexed keywords

DNA; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; STATISTICAL METHODS;

EID: 0042029527     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.69.8.4566-4574.2003     Document Type: Article
Times cited : (59)

References (51)
  • 1
    • 0027225978 scopus 로고
    • Application of fatty acid profiles in the identification of yeasts
    • Botha, A., and J. L. F. Kock. 1993. Application of fatty acid profiles in the identification of yeasts. Int. J. Food Microbiol. 19:39-51.
    • (1993) Int. J. Food Microbiol. , vol.19 , pp. 39-51
    • Botha, A.1    Kock, J.L.F.2
  • 2
    • 0034891474 scopus 로고    scopus 로고
    • Identification of Enterococcus, Streptococcus, and Staphylococcus by multi-variate analysis of proton magnetic resonance spectroscopic data from plate cultures
    • Bourne, R., U. Himmelreich, A. Sharma, C. Mountford, and T. Sorrell. 2001. Identification of Enterococcus, Streptococcus, and Staphylococcus by multi-variate analysis of proton magnetic resonance spectroscopic data from plate cultures. J. Clin. Microbiol. 39:2916-2923.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 2916-2923
    • Bourne, R.1    Himmelreich, U.2    Sharma, A.3    Mountford, C.4    Sorrell, T.5
  • 3
    • 0025327424 scopus 로고
    • Multivariate analysis of cellular carbohydrates and fatty acids of Candida albicans, Torulopsis glabrata, and Saccharomyces cerevisiae
    • Brondz, I., and I. Olsen. 1990. Multivariate analysis of cellular carbohydrates and fatty acids of Candida albicans, Torulopsis glabrata, and Saccharomyces cerevisiae. J. Clin. Microbiol. 28:1854-1857.
    • (1990) J. Clin. Microbiol. , vol.28 , pp. 1854-1857
    • Brondz, I.1    Olsen, I.2
  • 4
    • 0032850450 scopus 로고    scopus 로고
    • Heteronuclear NMR studies of metabolites produced by Cryptococcus neoformans in culture media: Identification of possible virulence factors
    • Bubb, W. A., L. C. Wright, M. Cagney, R. T. Santangelo, T. C. Sorrell, and P. W. Kuchel. 1999. Heteronuclear NMR studies of metabolites produced by Cryptococcus neoformans in culture media: identification of possible virulence factors. Magn. Reson. Med. 42:442-453.
    • (1999) Magn. Reson. Med. , vol.42 , pp. 442-453
    • Bubb, W.A.1    Wright, L.C.2    Cagney, M.3    Santangelo, R.T.4    Sorrell, T.C.5    Kuchel, P.W.6
  • 5
    • 0031954677 scopus 로고    scopus 로고
    • 1H nuclear magnetic resonance spectra of glucuronooxylomannans with a computer-simulated artificial neural network
    • 1H nuclear magnetic resonance spectra of glucuronooxylomannans with a computer-simulated artificial neural network. Clin. Diagn. Lab. Immunol. 5:146-159.
    • (1998) Clin. Diagn. Lab. Immunol. , vol.5 , pp. 146-159
    • Cherniak, R.1    Valafar, H.2    Morris, L.C.3    Valafar, F.4
  • 7
    • 0034926911 scopus 로고    scopus 로고
    • Partial sequence analysis of the actin gene and its potential for studying the phylogeny of Candida species and their teleomorphs
    • Daniel, H. M., T. C. Sorrell, and W. Meyer. 2001. Partial sequence analysis of the actin gene and its potential for studying the phylogeny of Candida species and their teleomorphs. Int. J. Syst. Evol. Microbiol. 51:1593-1606.
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 1593-1606
    • Daniel, H.M.1    Sorrell, T.C.2    Meyer, W.3
  • 9
    • 0009470051 scopus 로고
    • Developments in principal component analysis
    • W. J. Krzanowski (ed.). Clarendon Press, Oxford, United Kingdom
    • Flury, B. D. 1994. Developments in principal component analysis, p. 14-33. In W. J. Krzanowski (ed.), Descriptive multivariate analysis. Clarendon Press, Oxford, United Kingdom.
    • (1994) Descriptive Multivariate Analysis , pp. 14-33
    • Flury, B.D.1
  • 12
    • 0018850790 scopus 로고
    • Deoxyribonucleic acid base sequence relatedness among strains of Pichia ohmeri that produce dimorphic ascospores
    • Fuson, G. B., C. W. Price, and H. J. Phaff. 1980. Deoxyribonucleic acid base sequence relatedness among strains of Pichia ohmeri that produce dimorphic ascospores. Int. J. Syst. Bacteriol. 30:217-219.
    • (1980) Int. J. Syst. Bacteriol. , vol.30 , pp. 217-219
    • Fuson, G.B.1    Price, C.W.2    Phaff, H.J.3
  • 13
    • 9844234903 scopus 로고
    • Proton magnetic resonance spectroscopy - An aid in identification and chemotaxonomy of yeast
    • Gorin, P. A. J., and J. F. T. Spencer. 1970. Proton magnetic resonance spectroscopy - an aid in identification and chemotaxonomy of yeast. Adv. Appl. Microbiol. 13:25-89.
    • (1970) Adv. Appl. Microbiol. , vol.13 , pp. 25-89
    • Gorin, P.A.J.1    Spencer, J.F.T.2
  • 14
    • 0031904449 scopus 로고    scopus 로고
    • From magnetic resonance spectroscopy to classification of tumours. A review of pattern recognition methods
    • Hagberg, G. 1998. From magnetic resonance spectroscopy to classification of tumours. A review of pattern recognition methods. NMR Biomed. 11:148-156.
    • (1998) NMR Biomed. , vol.11 , pp. 148-156
    • Hagberg, G.1
  • 15
    • 0028881887 scopus 로고
    • New and emerging yeast pathogens
    • Hazen, K. C. 1995. New and emerging yeast pathogens. Clin. Microbiol. Rev. 8:462-478.
    • (1995) Clin. Microbiol. Rev. , vol.8 , pp. 462-478
    • Hazen, K.C.1
  • 18
    • 79960698472 scopus 로고
    • Water suppression that works: Excitation sculpting using arbitrary waveforms and pulse field gradients
    • Hwang, T.-L., and A. J. Shaka. 1995. Water suppression that works: excitation sculpting using arbitrary waveforms and pulse field gradients. J. Magn. Reson. 112:275-279.
    • (1995) J. Magn. Reson. , vol.112 , pp. 275-279
    • Hwang, T.-L.1    Shaka, A.J.2
  • 19
    • 0029868779 scopus 로고    scopus 로고
    • Ability of RapID Yeast Plus System to identify 304 clinically significant yeasts within 5 hours
    • Kitch, T. T., M. R. Jacobs, M. R. McGinnis, and P. C. Appelbaum. 1996. Ability of RapID Yeast Plus System to identify 304 clinically significant yeasts within 5 hours. J. Clin. Microbiol. 34:1069-1071.
    • (1996) J. Clin. Microbol. , vol.34 , pp. 1069-1071
    • Kitch, T.T.1    Jacobs, M.R.2    McGinnis, M.R.3    Appelbaum, P.C.4
  • 20
    • 0036550465 scopus 로고    scopus 로고
    • Non-albicans Candida spp. causing fungaemia: Pathogenicity and antifungal resistance
    • Krcmery, V., and A. J. Barnes. 2002. Non-albicans Candida spp. causing fungaemia: pathogenicity and antifungal resistance. J. Hosp. Infect. 50:243-260.
    • (2002) J. Hosp. Infect. , vol.50 , pp. 243-260
    • Krcmery, V.1    Barnes, A.J.2
  • 21
    • 0021181836 scopus 로고
    • Synonymy of the yeast genera Hansenula and Pichia demonstrated through comparisons of deoxyribonucleic acid relatedness
    • Kurtzman, C. P. 1984. Synonymy of the yeast genera Hansenula and Pichia demonstrated through comparisons of deoxyribonucleic acid relatedness. Antonie Leeuwenhoek 50:209-217.
    • (1984) Antonie Leeuwenhoek , vol.50 , pp. 209-217
    • Kurtzman, C.P.1
  • 22
    • 0023007439 scopus 로고
    • Interspecific discontinuity in the genus Clavispora Rodrigues de Miranda by phenetic analysis, genomic deoxyribonucleic acid reassociation, and restriction mapping of ribosomal deoxyribonucleic acid
    • Lachance, M.-A., H. J. Phaff, W. T. Starmer, A. Moffitt, and L. G. Olson. 1986. Interspecific discontinuity in the genus Clavispora Rodrigues de Miranda by phenetic analysis, genomic deoxyribonucleic acid reassociation, and restriction mapping of ribosomal deoxyribonucleic acid. Int. J. Syst. Bacteriol. 36:524-530.
    • (1986) Int. J. Syst. Bacteriol. , vol.36 , pp. 524-530
    • Lachance, M.-A.1    Phaff, H.J.2    Starmer, W.T.3    Moffitt, A.4    Olson, L.G.5
  • 23
    • 0030678606 scopus 로고    scopus 로고
    • Comparison of use of phenotypic and genotypic characteristics for identification of species of the anamorph genus Candida and related teleomorph yeast species
    • Latouche, G. N., H.-M. Daniel, O. C. Lee, T. G. Mitchell, T. C. Sorrell, and W. Meyer. 1997. Comparison of use of phenotypic and genotypic characteristics for identification of species of the anamorph genus Candida and related teleomorph yeast species. J. Clin. Microbiol. 35:3171-3180.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 3171-3180
    • Latouche, G.N.1    Daniel, H.-M.2    Lee, O.C.3    Mitchell, T.G.4    Sorrell, T.C.5    Meyer, W.6
  • 24
    • 35848934618 scopus 로고    scopus 로고
    • Accurate diagnosis and prognosis of human cancers by proton MRS and a three-stage classification strategy
    • Lean, C. L., R. L. Somorjai, I. C. P. Smith, P. Russell, and C. E. Mountford. 2002. Accurate diagnosis and prognosis of human cancers by proton MRS and a three-stage classification strategy. Annu. Rep. NMR Spectrosc. 48:71-111.
    • (2002) Annu. Rep. NMR Spectrosc. , vol.48 , pp. 71-111
    • Lean, C.L.1    Somorjai, R.L.2    Smith, I.C.P.3    Russell, P.4    Mountford, C.E.5
  • 25
    • 0026439153 scopus 로고
    • Genotypic identification and characterization of species and strains within the genus Candida using random amplified polymorphic DNA
    • Lehmann, P. F., D. Lin, and B. A. Lasker. 1992. Genotypic identification and characterization of species and strains within the genus Candida using random amplified polymorphic DNA. J. Clin. Microbiol. 30:3249-3254.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 3249-3254
    • Lehmann, P.F.1    Lin, D.2    Lasker, B.A.3
  • 28
    • 0002034685 scopus 로고    scopus 로고
    • Candida Berkout
    • C. P. Kurtzman and J. W. Fell (ed.). Elsevier, Amsterdam, The Netherlands
    • Meyer, S. A., R. W. Payne, and D. Yarrow. 1998. Candida Berkout, p. 454-573. In C. P. Kurtzman and J. W. Fell (ed.), The yeasts: a taxonomic study. Elsevier, Amsterdam, The Netherlands.
    • (1998) The Yeasts: A Taxonomic Study , pp. 454-573
    • Meyer, S.A.1    Payne, R.W.2    Yarrow, D.3
  • 31
    • 0031926888 scopus 로고    scopus 로고
    • Near-optimal region selection for feature space reduction: Novel preprocessing methods for classifying MR spectra
    • Nikulin, A., B. Dolenko, T. Bezabeh, and R. Somorjai. 1998. Near-optimal region selection for feature space reduction: novel preprocessing methods for classifying MR spectra. NMR Biomed. 11:209-217.
    • (1998) NMR Biomed. , vol.11 , pp. 209-217
    • Nikulin, A.1    Dolenko, B.2    Bezabeh, T.3    Somorjai, R.4
  • 33
    • 0029019075 scopus 로고
    • Epidemiology of candidiasis
    • Pfaller, M. A. 1995. Epidemiology of candidiasis. J. Hosp. Infect. 30(Suppl.): 329-338.
    • (1995) J. Hosp. Infect. , vol.30 , Issue.SUPPL. , pp. 329-338
    • Pfaller, M.A.1
  • 34
    • 0033993693 scopus 로고    scopus 로고
    • Bloodstream infections due to Candida species: SENTRY Antimicrobial Surveillance Program in North America and Latin America, 1997-1998
    • Pfaller, M. A., R. N. Jones, G. V. Doern, H. S. Sader, S. A. Messer, A. Houston, S. Coffman, R. J. Hollis, and The SENTRY Participant Group. 2000. Bloodstream infections due to Candida species: SENTRY Antimicrobial Surveillance Program in North America and Latin America, 1997-1998. Antimicrobial Agents Chemother. 44:747-751.
    • (2000) Antimicrobial Agents Chemother. , vol.44 , pp. 747-751
    • Pfaller, M.A.1    Jones, R.N.2    Doern, G.V.3    Sader, H.S.4    Messer, S.A.5    Houston, A.6    Coffman, S.7    Hollis, R.J.8
  • 35
    • 0036200361 scopus 로고    scopus 로고
    • Trends in antifungal susceptibility of Candida spp. isolated from pediatric and adult patients with bloodstream infections: SENTRY Antimicrobial Surveillance Program, 1997 to 2000
    • Pfaller, M. A., D. J. Diekema, R. N. Jones, S. A. Messer, R. J. Hollis, and the SENTRY Participants Group. 2002. Trends in antifungal susceptibility of Candida spp. isolated from pediatric and adult patients with bloodstream infections: SENTRY Antimicrobial Surveillance Program, 1997 to 2000. J. Clin. Microbiol. 40:852-856.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 852-856
    • Pfaller, M.A.1    Diekema, D.J.2    Jones, R.N.3    Messer, S.A.4    Hollis, R.J.5
  • 36
    • 0042894409 scopus 로고
    • The polyol pattern, chemotaxonomy, and phylogeny of the fungi
    • Pfyffer, G. E., B. U. Pfyffer, and D. M. Rast. 1986. The polyol pattern, chemotaxonomy, and phylogeny of the fungi. Sydowia 39:160-201.
    • (1986) Sydowia , vol.39 , pp. 160-201
    • Pfyffer, G.E.1    Pfyffer, B.U.2    Rast, D.M.3
  • 37
    • 0017897806 scopus 로고
    • Genome comparison in yeast systematics: Delimitation of species within the genera Schwanniomyces, Saccharomyces, Debaryomyces, and Pichia
    • Price, C. W., G. B. Fuson, and H. J. Phaff. 1978. Genome comparison in yeast systematics: delimitation of species within the genera Schwanniomyces, Saccharomyces, Debaryomyces, and Pichia. Microbiol. Rev. 42:161-193.
    • (1978) Microbiol. Rev. , vol.42 , pp. 161-193
    • Price, C.W.1    Fuson, G.B.2    Phaff, H.J.3
  • 38
    • 0031964404 scopus 로고    scopus 로고
    • Confirmation of the distinct genotype groups within the form species Candida parapsilosis
    • Roy, B., and S. A. Meyer. 1998. Confirmation of the distinct genotype groups within the form species Candida parapsilosis. J. Clin. Microbiol. 36:216-218.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 216-218
    • Roy, B.1    Meyer, S.A.2
  • 39
    • 0023135878 scopus 로고
    • Application of DNA typing methods to epidemiology and taxonomy of Candida species
    • Scherer, S., and D. A. Stevens. 1987. Application of DNA typing methods to epidemiology and taxonomy of Candida species. J. Clin. Microbiol. 25:675-679.
    • (1987) J. Clin. Microbiol. , vol.25 , pp. 675-679
    • Scherer, S.1    Stevens, D.A.2
  • 40
    • 0032951759 scopus 로고    scopus 로고
    • Rapid identification of Candida glabrata by using a dipstick to detect trehalase-generated glucose
    • Schnitzler, N., R. Lütticken, and G. Haase. 1999. Rapid identification of Candida glabrata by using a dipstick to detect trehalase-generated glucose. J. Clin. Microbiol. 37:202-205.
    • (1999) J. Clin. Microbiol. , vol.37 , pp. 202-205
    • Schnitzler, N.1    Lütticken, R.2    Haase, G.3
  • 41
    • 13444269041 scopus 로고
    • Computer-optimized decoupling scheme for wideband applications and low-level operation
    • Shaka, A. J., P. B. Barker, and R. Freeman. 1985. Computer-optimized decoupling scheme for wideband applications and low-level operation. J. Magn. Reson. 64:547-552.
    • (1985) J. Magn. Reson. , vol.64 , pp. 547-552
    • Shaka, A.J.1    Barker, P.B.2    Freeman, R.3
  • 42
    • 0034459739 scopus 로고    scopus 로고
    • Tween 80 opacity test responses of various Candida species
    • Slifkin, M. 2000. Tween 80 opacity test responses of various Candida species. J. Clin. Microbiol. 38:4626-4628.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 4626-4628
    • Slifkin, M.1
  • 44
    • 0037185960 scopus 로고    scopus 로고
    • Distinguishing normal from rejecting renal allografts: Application of a three-stage classification strategy to MR and IR spectra of urine
    • Somorjai, R. L., B. Dolenko, A. Nikulin, P. Nickerson, D. Rush, A. Shaw, M. Glogowski, J. Rendell, and R. Deslauriers. 2002. Distinguishing normal from rejecting renal allografts: application of a three-stage classification strategy to MR and IR spectra of urine. Vib. Spectrosc. 28:97-102.
    • (2002) Vib. Spectrosc. , vol.28 , pp. 97-102
    • Somorjai, R.L.1    Dolenko, B.2    Nikulin, A.3    Nickerson, P.4    Rush, D.5    Shaw, A.6    Glogowski, M.7    Rendell, J.8    Deslauriers, R.9
  • 45
    • 0000160422 scopus 로고    scopus 로고
    • Flow injection proton nuclear magnetic resonance spectroscopy combined with pattern recognition methods: Implications for rapid structural studies and high throughput biochemical screening
    • Spraul, M., M. Hofmann, M. Ackermann, A. W. Nicholls, S. J. P. Damment, J. N. Haselden, J. P. Shockor, J. K. Nicholson, and J. C. Lindon. 1997. Flow injection proton nuclear magnetic resonance spectroscopy combined with pattern recognition methods: implications for rapid structural studies and high throughput biochemical screening. Anal. Commun. 34:339-341.
    • (1997) Anal. Commun. , vol.34 , pp. 339-341
    • Spraul, M.1    Hofmann, M.2    Ackermann, M.3    Nicholls, A.W.4    Damment, S.J.P.5    Haselden, J.N.6    Shockor, J.P.7    Nicholson, J.K.8    Lindon, J.C.9
  • 46
    • 0026659527 scopus 로고
    • Automated systems for identification of microorganisms
    • Stager, C. E., and J. R. Davis. 1992. Automated systems for identification of microorganisms. Clin. Microbiol. Rev. 5:302-327.
    • (1992) Clin. Microbiol. Rev. , vol.5 , pp. 302-327
    • Stager, C.E.1    Davis, J.R.2
  • 47
    • 0017819061 scopus 로고
    • Pichia amethionina, a new heterothallic yeast associated with the decaying stems of cereoid cacti
    • Starmer, W. T., H. J. Phaff, M. Miranda, and M. W. Miller. 1978. Pichia amethionina, a new heterothallic yeast associated with the decaying stems of cereoid cacti. Int. J. Syst. Bacteriol. 28:433-441.
    • (1978) Int. J. Syst. Bacteriol. , vol.28 , pp. 433-441
    • Starmer, W.T.1    Phaff, H.J.2    Miranda, M.3    Miller, M.W.4
  • 48
    • 0029100965 scopus 로고
    • Candida dubliniensis sp, nov.: Phenotypic and molecular characterization of a novel species associated with oral candidosis in HIV-infected individuals
    • Sullivan, D. J., T. J. Westerneng, K. A. Haynes, D. A. Bennett, and D. C. Coleman. 1995. Candida dubliniensis sp, nov.: phenotypic and molecular characterization of a novel species associated with oral candidosis in HIV-infected individuals. Microbiology 141:1507-1521.
    • (1995) Microbiology , vol.141 , pp. 1507-1521
    • Sullivan, D.J.1    Westerneng, T.J.2    Haynes, K.A.3    Bennett, D.A.4    Coleman, D.C.5
  • 50
    • 0041391421 scopus 로고
    • A taxonomic study of the yeast genus Candida Berkhout
    • Viljoen, B. C., and J. L. F. Kock. 1989. A taxonomic study of the yeast genus Candida Berkhout. Syst. Appl. Microbiol. 12:91-102.
    • (1989) Syst. Appl. Microbiol. , vol.12 , pp. 91-102
    • Viljoen, B.C.1    Kock, J.L.F.2
  • 51
    • 0004663987 scopus 로고
    • Accuracy and precision in the estimation of internuclear distances for structure determinations
    • Weiss, G. H., J. E. Kiefer, and J. A. Ferretti. 1992. Accuracy and precision in the estimation of internuclear distances for structure determinations. J. Magn. Reson. 97:227-234.
    • (1992) J. Magn. Reson. , vol.97 , pp. 227-234
    • Weiss, G.H.1    Kiefer, J.E.2    Ferretti, J.A.3


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