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Volumn 28, Issue 1, 2006, Pages 76-83

A gene coexpression network for bovine skeletal muscle inferred from microarray data

Author keywords

[No Author keywords available]

Indexed keywords

ACTIN; CONNECTIN; MUSCLE PROTEIN; MYOSIN; TROPOMYOSIN; MAGNESIUM; TRANSCRIPTION FACTOR;

EID: 33947382481     PISSN: 10948341     EISSN: 15312267     Source Type: Journal    
DOI: 10.1152/physiolgenomics.00105.2006     Document Type: Conference Paper
Times cited : (29)

References (37)
  • 1
    • 1542350622 scopus 로고    scopus 로고
    • Domestic-animal genomics: Deciphering the genetics of complex traits
    • Andersson L, Georges M. Domestic-animal genomics: deciphering the genetics of complex traits. Nat Rev Genet 5: 202-212, 2004.
    • (2004) Nat Rev Genet , vol.5 , pp. 202-212
    • Andersson, L.1    Georges, M.2
  • 6
    • 12344321571 scopus 로고    scopus 로고
    • Discovery of meaningful associations in genomic data using partial correlation coefficients
    • de la Fuente A, Bing N, Hoeschele I, Mendes P. Discovery of meaningful associations in genomic data using partial correlation coefficients. Bioinformatics 20: 3565-3574, 2004.
    • (2004) Bioinformatics , vol.20 , pp. 3565-3574
    • de la Fuente, A.1    Bing, N.2    Hoeschele, I.3    Mendes, P.4
  • 8
    • 0042121055 scopus 로고    scopus 로고
    • Onto-Tools, the toolkit of the modern biologist: Onto-Express, Onto-Compare, Onto-Design and Onto-Translate
    • Draghici S, Khatri P, Bhavsar P, Shah A, Krawetz SA, Tainsky MA. Onto-Tools, the toolkit of the modern biologist: Onto-Express, Onto-Compare, Onto-Design and Onto-Translate. Nucleic Acids Res 31: 3775-3781, 2003.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3775-3781
    • Draghici, S.1    Khatri, P.2    Bhavsar, P.3    Shah, A.4    Krawetz, S.A.5    Tainsky, M.A.6
  • 9
    • 0034731460 scopus 로고    scopus 로고
    • Faulkner G, Pallavicini A, Comelli A, Salamon M, Bortoletto G, Ievollela C, Trevisan S, Kojic S, Dalla Vecchia F, Laveder P, Valle G, Lanfranchi G. FATZ, a filamin-, actinin-, and telethonin-binding protein of the Z-disc of skeletal muscle. J Biol Chem 275: 41234-41242, 2000.
    • Faulkner G, Pallavicini A, Comelli A, Salamon M, Bortoletto G, Ievollela C, Trevisan S, Kojic S, Dalla Vecchia F, Laveder P, Valle G, Lanfranchi G. FATZ, a filamin-, actinin-, and telethonin-binding protein of the Z-disc of skeletal muscle. J Biol Chem 275: 41234-41242, 2000.
  • 11
    • 2942735211 scopus 로고    scopus 로고
    • The ZASP-like motif in actinin-associated LIM protein is required for interaction with the alpha-actinin rod and for targeting to the muscle Z-line
    • Klaavuniemi T, Kelloniemi A, Ylanne J. The ZASP-like motif in actinin-associated LIM protein is required for interaction with the alpha-actinin rod and for targeting to the muscle Z-line. J Biol Chem 279: 26402-26410, 2004.
    • (2004) J Biol Chem , vol.279 , pp. 26402-26410
    • Klaavuniemi, T.1    Kelloniemi, A.2    Ylanne, J.3
  • 12
    • 9744252828 scopus 로고    scopus 로고
    • Development and application of a bovine cDNA microarray for expression profiling of muscle and adipose tissue
    • Lehnert SA, Wang YH, Byrne KA. Development and application of a bovine cDNA microarray for expression profiling of muscle and adipose tissue. Aust J Exp Agric 44: 1127-1133, 2004.
    • (2004) Aust J Exp Agric , vol.44 , pp. 1127-1133
    • Lehnert, S.A.1    Wang, Y.H.2    Byrne, K.A.3
  • 13
  • 15
    • 0346655230 scopus 로고    scopus 로고
    • Molecular cloning and characterization of Mustang, a novel nuclear protein expressed during skeletal development and regeneration
    • Lombardo F, Komatsu D, Hadjiargyrou M. Molecular cloning and characterization of Mustang, a novel nuclear protein expressed during skeletal development and regeneration. FASEB J 18: 52-61, 2004.
    • (2004) FASEB J , vol.18 , pp. 52-61
    • Lombardo, F.1    Komatsu, D.2    Hadjiargyrou, M.3
  • 17
    • 0030220198 scopus 로고    scopus 로고
    • Deficiency of a skeletal muscle isoform of alpha-actinin (alpha-actinin-3) in merosin-positive congenital muscular dystrophy
    • North KN, Beggs AH. Deficiency of a skeletal muscle isoform of alpha-actinin (alpha-actinin-3) in merosin-positive congenital muscular dystrophy. Neuromuscul Disord 6: 229-235, 1996.
    • (1996) Neuromuscul Disord , vol.6 , pp. 229-235
    • North, K.N.1    Beggs, A.H.2
  • 18
    • 0642279219 scopus 로고    scopus 로고
    • A mixture model-based cluster analysis of DNA microarray gene expression data on Brahman and Brahman composite steers fed high-, medium-, and low-quality diets
    • Reverter A, Byrne KA, Bruce HL, Wang YH, Dalrymple BP, Lehnert SA. A mixture model-based cluster analysis of DNA microarray gene expression data on Brahman and Brahman composite steers fed high-, medium-, and low-quality diets. J Anim Sci 81: 1900-1910, 2003.
    • (2003) J Anim Sci , vol.81 , pp. 1900-1910
    • Reverter, A.1    Byrne, K.A.2    Bruce, H.L.3    Wang, Y.H.4    Dalrymple, B.P.5    Lehnert, S.A.6
  • 19
    • 9744236665 scopus 로고    scopus 로고
    • Joint analysis of multiple cDNA microarray studies via multivariate mixed models applied to genetic improvement of beef cattle
    • Reverter A, Wang YH, Byrne KA, Tan SH, Harper GS, Lehnert SA. Joint analysis of multiple cDNA microarray studies via multivariate mixed models applied to genetic improvement of beef cattle. J Anim Sci 82: 3430-3439, 2004.
    • (2004) J Anim Sci , vol.82 , pp. 3430-3439
    • Reverter, A.1    Wang, Y.H.2    Byrne, K.A.3    Tan, S.H.4    Harper, G.S.5    Lehnert, S.A.6
  • 22
    • 33749988857 scopus 로고    scopus 로고
    • Simultaneous identification of differential gene expression and connectivity in inflammation, adipogenesis and cancer
    • July 24, doi:10.1093/bioinformatics/btl392
    • Reverter A, Ingham A, Lehnert SA, Tan SH, Wang YH, Ratnakumar A, Dalrymple BP. Simultaneous identification of differential gene expression and connectivity in inflammation, adipogenesis and cancer. Bioinformatics July 24, 2006; doi:10.1093/bioinformatics/btl392.
    • (2006) Bioinformatics
    • Reverter, A.1    Ingham, A.2    Lehnert, S.A.3    Tan, S.H.4    Wang, Y.H.5    Ratnakumar, A.6    Dalrymple, B.P.7
  • 23
    • 15944417140 scopus 로고    scopus 로고
    • Magnesium: The missing element in molecular views of cell proliferation control
    • Rubin H. Magnesium: the missing element in molecular views of cell proliferation control. Bioessays 27: 311-320, 2005.
    • (2005) Bioessays , vol.27 , pp. 311-320
    • Rubin, H.1
  • 24
    • 0344664368 scopus 로고    scopus 로고
    • Myofibrillar myopathy caused by novel dominant negative alpha B-crystallin mutations
    • Selcen D, Engel AG. Myofibrillar myopathy caused by novel dominant negative alpha B-crystallin mutations. Ann Neurol 54: 804-810, 2003.
    • (2003) Ann Neurol , vol.54 , pp. 804-810
    • Selcen, D.1    Engel, A.G.2
  • 26
    • 0031053157 scopus 로고    scopus 로고
    • A combination of MEF3 and NFI proteins activates transcription in a subset of fast-twitch muscles
    • Spitz F, Salminen M, Demignon J, Kahn A, Daegelen D, Maire P. A combination of MEF3 and NFI proteins activates transcription in a subset of fast-twitch muscles. Mol Cell Biol 17: 656-666, 1997.
    • (1997) Mol Cell Biol , vol.17 , pp. 656-666
    • Spitz, F.1    Salminen, M.2    Demignon, J.3    Kahn, A.4    Daegelen, D.5    Maire, P.6
  • 29
    • 0035198464 scopus 로고    scopus 로고
    • A member of the Y-box protein family interacts with an upstream element in the alpha1 (I) collagen gene
    • Sun W, Hou F, Panchenko MP, Smith BD. A member of the Y-box protein family interacts with an upstream element in the alpha1 (I) collagen gene. Matrix Biol 20: 527-541, 2001.
    • (2001) Matrix Biol , vol.20 , pp. 527-541
    • Sun, W.1    Hou, F.2    Panchenko, M.P.3    Smith, B.D.4
  • 35
    • 25444476441 scopus 로고    scopus 로고
    • Systematic survey reveals general applicability of "guilt-by-association" within gene coexpression networks
    • Wolfe CJ, Kohane IS, Butte AJ. Systematic survey reveals general applicability of "guilt-by-association" within gene coexpression networks. BMC Bioinformatics 6: 227, 2005.
    • (2005) BMC Bioinformatics , vol.6 , pp. 227
    • Wolfe, C.J.1    Kohane, I.S.2    Butte, A.J.3
  • 36
    • 28844456877 scopus 로고    scopus 로고
    • Advances in livestock genomics: Opening the barn door
    • Womack JE. Advances in livestock genomics: opening the barn door. Genome Res 15: 1699-1705, 2005.
    • (2005) Genome Res , vol.15 , pp. 1699-1705
    • Womack, J.E.1
  • 37
    • 0029047267 scopus 로고
    • Inactivation of the myogenic bHLH gene MRF4 results in up-regulation of myogenin and rib anomalies
    • Zhang W, Behringer RR, Olson EN. Inactivation of the myogenic bHLH gene MRF4 results in up-regulation of myogenin and rib anomalies. Genes Dev 9: 1388-1399, 1995.
    • (1995) Genes Dev , vol.9 , pp. 1388-1399
    • Zhang, W.1    Behringer, R.R.2    Olson, E.N.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.