Speciation of two sympatric coastal fish species, Girella punctata and Girella leonina (Perciformes, Kyphosidae)

Organisms Diversity and Evolution

Volumn 7, Issue 1, 2007, Pages 12-19

  Itoi, Shiro ^a   Saito, Takashi ^a   Washio, Sayaka ^a   Shimojo, Mai ^a   Takai, Noriyuki ^a   Yoshihara, Kiyoshi ^a   Sugita, Haruo ^a  

^a NIHON UNIVERSITY   (Japan)

Author keywords

12S rRNA; 16S rRNA; Biogeography; Girella mezina; Molecular clock; mtDNA

Indexed keywords

BAYESIAN ANALYSIS; DIVERGENCE; GENETIC ANALYSIS; ISOLATION EFFECT; MITOCHONDRIAL DNA; PERCIFORM; PHYLOGEOGRAPHY; REEF; RNA; SPECIATION (BIOLOGY); SYMPATRY;

ASIA; EURASIA; FAR EAST; JAPAN; PACIFIC OCEAN; PACIFIC OCEAN (SOUTH);

CLUPEOCEPHALA; ELOPOMORPHA; GIRELLA; GIRELLA LEONINA; GIRELLA MEZINA; GIRELLA PUNCTATA; KYPHOSIDAE; MYA; PERCIFORMES;

EID: 33947328525     PISSN: 14396092     EISSN: 16181077     Source Type: Journal    
DOI: 10.1016/j.ode.2006.01.002     Document Type: Article

References (20)

1. Cerling T.E., Harris J.M., MacFadden B.J., Leakeys M.G., Quade J., Eisenmann V., and Ehleringer J.R. Global vegetation change through the Miocene/Pliocene boundary. Nature 389 (1997) 153-157
2. Felsenstein J. Distance methods for inferring phylogenies: a justification. Evolution 38 (1984) 16-24
3. Huelsenbeck J.P., and Ronquist F. MrBAYES: Bayesian inference of phylogeny. Bioinformatics 17 (2001) 754-755
4. Inoue J.G., Miya M., Venkatesh B., and Nishida M. The mitochondrial genome of Indonesian coelacanth Latimeria menadoensis (Sarcopterygii: Coelacanthiformes) and divergence time estimation between the two coelacanths. Gene 349 (2005) 227-235
5. Kanda M., and Yamaoka K. Tooth and gut morphology in relation to feeding in three girellid species (Perciformes: Girellidae) from southern Japan. Neth. J. Zool. 45 (1995) 495-512
6. Marchuk D., Drumm M., Saulono A., and Collins F.S. Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR products. Nucleic Acids Res. 19 (1991) 1154
7. Okuno R. In: [Ecology of rock fish] (1971), Sogensha, Osaka pp. 151-176 [in Japanese]
8. Richardson J. Report on the ichthyology of the seas of China and Japan. Rep. Brit. Assoc. Adv. Sci. 1845 (1846) 187-320
9. Sezaki K., Begum R.A., Wongrat P., Srivastava M.P., SriKantha S., Kikuchi K., Ishihara H., Tanaka S., Taniuchi T., and Watabe S. Molecular phylogeny of Asian freshwater and marine stingrays based on the DNA nucleotide and deduced amino acid sequences of the cytochrome b gene. Fish. Sci. 65 (1999) 563-570
10. Swofford D.L. PAUP*: Phylogenetic Analysis Using Parsimony (* and other Methods), Version 4.0b 10 (2003), Sinauer Associates, Sunderland, MA
11. Tada R. Paleooceanographic evolution of the Japan Sea. Palaeogeogr. Palaeoclimatol. Palaeoecol. 108 (1994) 487-508
12. Tada R. Paleooceanographic evolution of the Japan Sea and its implication to the hydrocarbon potential evaluation. Chishitsu News 495 (1995) 59-71
13. Taira A. Tectonic evolution of the Japanese Island arc system. Annu. Rev. Earth Planet. Sci. 29 (2001) 109-134
14. Taira A., Tokuyama H., and Soh W. Accretion tectonics and evolution of Japan. In: Ben-Avraham Z. (Ed). The Evolution of Pacific Ocean Margins (1989), Oxford University Press, New York 100-123
15. Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
16. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24 (1997) 4876-4882
17. Thorne J.L., and Kishino H. Divergence time estimation and rate evolution with multilocus data sets. System Biol. 51 (2002) 689-702
18. Yagishita N., and Nakabo T. Revision of the genus Girella (Girellidae) from East Asia. Ichthyol. Res. 47 (2000) 119-135
19. Yagishita N., and Nakabo T. Evolutionary trend in feeding habits of Girella (Perciformes: Girellidae). Ichthyol. Res. 50 (2003) 358-366
20. Yang Z. PAML: a program package for phylogenetic analysis by maximum likelihood. CABIOS 15 (1997) 555-556