Examining interactions between legumes and Aphanomyces euteiches with real-time PCR

Australasian Plant Pathology

Volumn 36, Issue 2, 2007, Pages 102-108

  Vandemark, G J ^a   Ariss, J J ^a  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

Author keywords

Alfalfa; Disease resistance; Pea; Quantitative PCR

Indexed keywords

APHANOMYCES; APHANOMYCES EUTEICHES; MEDICAGO SATIVA; PISUM SATIVUM;

EID: 33847674447     PISSN: 08153191     EISSN: None     Source Type: Journal    
DOI: 10.1071/AP06090     Document Type: Conference Paper

References (36)

1. Bohm J, Hahn A, Schubert R, Bahnweg G, Alder N, Nechwatal J, Oehlmann R, Osswald W (1999) Real-time quantitative PCR: DNA determination in isolates spores of the mycorrhizal fungus Glomus mosseae and monitoring of Phytophthora infestans and Phytophthora citricola in their respective host plants. Journal of Phytopathology 147, 409-416.
2. Bunting TE, Plumley KA, Clarke BB, Hillman BI (1996) Identification of Magnaporthe poae by PCR and examination of its relationship to other fungi by analysis of their nuclear rDNA ITS-1 regions. Phytopathology 86, 398-404.
3. Chen W, Gray LE, Grau CR (1996) Molecular differentiation of fungi associated with brown stem rot and detection of Phialophora gregata in resistant and susceptible soybean cultivars. Phytopathology 86, 1140-1148.
4. Crosslin JM, Vandemark GJ, Munyaneza JE (2006) Development of a Real-Time, Quantitative PCR for Detection of the Columbia Basin Potato Purple Top Phytoplasma in Plants and Beet Leafhoppers. Plant Disease 90, 663-667.
5. Davis DW, Fritz VA, Pfleger FL, Percich JA, Malvick DK (1995) MN 144, MN 313, and MN 314: Garden pea lines resistant to root rot caused by Aphanomyces euteiches Drechs. Horticultural Science 30, 639-640.
6. Fitzpatrick S, Brummer J, Hudelson B, Malvick D, Grau CR (1998) Standard Test: Aphanomyces root rot resistance (Races 1 and 2). North American Alfalfa Improvement Conference. Available at http://www.naaic.org [Verified 29 January 2004]
7. Grau CR (1990) Aphanomyces root rot. In 'Compendium of Alfalfa Diseases'. (Eds DL Stuteville, DC Erwin) pp. 10-11. (American Phytopathological Society Press: St. Paul, MN)
8. Grau CR, Muehlchen AM, Tofte JE (1991) Variability in virulence of Aphanomyces euteiches. Plant Disease 75, 1153-1156.
9. Heid CA, Stevens J, Livak KJ, Williams PM (1996) Real time quantitative PCR. Genome Research 6, 986-994.
10. Holland PM, Abramson RD, Watson R, Gelfand D (1991) Detection of specific polymerase chain reaction products by utilizing the 5′-3′ exonuclease activity of Thermus aquaticus DNA polymerase. Proceedings of the National Academy of Science (USA) 88, 7276-7280.
11. Kjøller R, Rosendahl S (1998) Enzymatic activity of themycelium compared with oospore development during infection of pea roots by Aphanomyces euteiches. Phytopathology 88, 992-996.
12. Ko KS, Jung HS (2002) Three nonorthologous ITS 1 types are present in a polypore fungus Trichaptum abietinum. Molecular Phylogenetic Evolution 23, 112-122. doi: 10.1016/S1055-7903(02)00009-X
13. Kraft JM (1992) Registration of 90-2079, 90-2131, and 90-2322 pea germplasms. Crop Science 32, 1076.
14. Kraft JM, Boge WL (1994) Development of an antiserum to quantify Aphanomyces euteiches in resistant pea lines. Plant Disease 78, 179-183.
15. Kraft JM, Erwin DC (1967) Stimulation of Pythium aphanidermatum by exudates from mung bean seeds. Phytopathology 57, 866-868.
16. Larsen RC, Hollingsworth CR, Vandemark GJ, Gritsenko M, Gray FA (2002) Use of PCR-based markers for the identification of Phoma sclerotioides causing brown root rot of alfalfa. Plant Disease 86, 928-932.
17. Lee SB, White TJ, Taylor JW (1993) Detection of Phytophthora species by oligonucleotide hybridization to amplified ribosomal DNA spacers. Phytopathology 83, 177-181.
18. Lévesque CA, Vrain TC, De Boer SH (1994) Development of a species-specific probe for Pythium ultimum using amplified ribosomal DNA. Phytopathology 84, 474-478.
19. Llanos C, Lockwood JL (1960) Factors affecting zoospore production by Aphanomyces euteiches. Phytopathology 50, 826-830.
20. Malvick DK, Grau CR (2001) Characteristics and frequency of Aphanomyces euteiches races 1 and 2 associated with alfalfa in the Midwestern United States. Plant Disease 85, 740-744.
21. Malvick DK, Percich JA (1999) Identification of Pisum sativum germplasm with resistance to root rot caused by multiple strains of Aphanomyces euteiches. Plant Disease 83, 51-54.
22. Mitchell JE, Yang CY (1966) Factors affecting growth and development of Aphanomyces euteiches. Phytopathology 56, 917-922.
23. Mumford RA, Walsh K, Barker I, Boonham N (2000) Detection of potato mop top virus and tobacco rattle virus using a multiplex real-time fluorescent reverse-transcription polymerase chain reaction assay. Phytopathology 90, 448-453.
24. Papazivas GC, Ayers WA (1974) Aphanomyces species and their root diseases in pea and sugarbeet. USDA Research Technical Bulletin No. 1485. 158 pp.
25. Paran I, Michelmore RW (1993) Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce. Theoretical and Applied Genetics 85, 985-993. doi: 10.1007/BF00215038
26. Pfender WF (2001) Aphanomyces root rot. In 'Compendium of Pea Diseases and Pests'. (Eds JM Kraft, FL Pfleger) pp. 9-12. (American Phytopathological Society Press: St. Paul, MN)
27. Pfender WF, Hagedorn DJ (1982) Aphanomyces euteiches f. sp. phaseoli, a causal agent of bean root and hypocotyl rot. Phytopathology 72, 306-310.
28. Pilet-Nayel ML, Muehlbauer FJ, McGee RJ, Kraft JM, Baranger A, Coyne CJ (2002) Quantitative trait loci for partial resistance to Aphanomyces root rot in pea. Theoretical and Applied Genetics 106, 28-39.
29. Rao A, Gritton ET, Grau CR, Peterson LA (1995) Aeroponics chambers for evaluating resistance to Aphanomyces root rot of peas (Pisum sativum). Plant Disease 79, 128-132.
30. Sanford GB (1933) A root rot of sweet clover and related crops caused by Plenodomus melioto Dearness & Sanford. Canadian Journal of Research Section C 8, 337-348.
31. Shehata MA, Davis DW, Pfleger FL (1983) Breeding for resistance to Aphanomyces euteiches root rot and Rhizoctonia solani stem rot in peas. Journal of the American Society for Horticultural Science 108, 1080-1085.
32. Vandemark GJ, Barker BM (2003) Quantifying the relationship between disease severity and the amount of Aphanomyces euteiches detected in roots of alfalfa and pea with a real-time PCR assay. Archives of Phytopathology and Plant Protection. 36, 81-93. doi: 10.1080/03235400310001595720
33. Vandemark GJ, Grunwald NJ (2005) Use of real-time PCR to examine the relationship between disease severity in pea and Aphanomyces euteiches DNA content in roots. European Journal of Plant Pathology 111, 309-316. doi: 10.1007/s10658-004-4170-0
34. Vandemark GJ, Kraft JM, Larsen RC, Gritsenko MA, Boge WL (2000) A PCR-based assay using sequence characterized DNA markers for the identification and detection of Aphanomyces euteiches. Phytopathology 90, 1137-1144.
35. Vandemark GJ, Barker BM, Gritsenko MA (2002) Quantifying Aphanomyces euteiches in alfalfa with a fluorescent polymerase chain reaction assay. Phytopathology 92, 265-272.
36. Wicker E, Rouxel F (2001) Specific behavior of French Aphanomyces euteiches Drechs. populations for virulence and aggressiveness on pea, related to isolates from Europe, America and New Zealand. European Journal of Plant Pathology 107, 919-929. doi: 10.1023/A:1013171217610