-
1
-
-
0035501220
-
The problems with hybrids: Setting conservation guidelines
-
Allendorf FW, Leary RF, Spruell P, Wenburg JK (2001) The problems with hybrids: setting conservation guidelines. TREE 16:613-622
-
(2001)
TREE
, vol.16
, pp. 613-622
-
-
Allendorf, F.W.1
Leary, R.F.2
Spruell, P.3
Wenburg, J.K.4
-
2
-
-
0032900678
-
Median-joining networks for inferring intraspecific phylogenies
-
Bandelt HJ, Forster P, Rohl A (1999) Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16:37-48
-
(1999)
Mol Biol Evol
, vol.16
, pp. 37-48
-
-
Bandelt, H.J.1
Forster, P.2
Rohl, A.3
-
3
-
-
0035043379
-
The role of hybridization in evolution
-
Barton NH (2001) The role of hybridization in evolution. Mol Ecol 10:551-568
-
(2001)
Mol Ecol
, vol.10
, pp. 551-568
-
-
Barton, N.H.1
-
4
-
-
1642320098
-
Effect of unsampled populations on the estimation of population sizes and migration rates between sampled populations
-
Beerli P (2004) Effect of unsampled populations on the estimation of population sizes and migration rates between sampled populations. Mol Ecol 13:827-836
-
(2004)
Mol Ecol
, vol.13
, pp. 827-836
-
-
Beerli, P.1
-
6
-
-
0026935318
-
DNA sequence variation of the mitochondrial control region among geographically and morphologically remote European brown trout Salmo trutta populations
-
Bernatchez L, Guyomard R, Bonhomme F (1992) DNA sequence variation of the mitochondrial control region among geographically and morphologically remote European brown trout Salmo trutta populations. Mol Ecol 1:161-173
-
(1992)
Mol Ecol
, vol.1
, pp. 161-173
-
-
Bernatchez, L.1
Guyomard, R.2
Bonhomme, F.3
-
7
-
-
0038645591
-
The phylogeography of dusky dolphins (Lagenorhynchus obscurus): A critical examination of network methods and rooting procedures
-
Cassens I, Van Waerebeek K, Best PB, Crespo EA, Reyes J, Milinkovitch MC (2003) The phylogeography of dusky dolphins (Lagenorhynchus obscurus): a critical examination of network methods and rooting procedures. Mol Ecol 12:1781-1792
-
(2003)
Mol Ecol
, vol.12
, pp. 1781-1792
-
-
Cassens, I.1
Van Waerebeek, K.2
Best, P.B.3
Crespo, E.A.4
Reyes, J.5
Milinkovitch, M.C.6
-
9
-
-
0032425009
-
Palaeofluvial geomorphology in southern Africa: A review
-
Dollar ESJ (1998) Palaeofluvial geomorphology in southern Africa: a review. Prog Phys Geog 22:325-349
-
(1998)
Prog Phys Geog
, vol.22
, pp. 325-349
-
-
Dollar, E.S.J.1
-
10
-
-
21244479740
-
Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
-
Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14:2611-2620
-
(2005)
Mol Ecol
, vol.14
, pp. 2611-2620
-
-
Evanno, G.1
Regnaut, S.2
Goudet, J.3
-
11
-
-
0242668321
-
Phylogeographic patterns in populations of the black-chinned tilapia complex (Teleostei, Cichlidae) from coastal areas in West Africa: Support for the refuge zone theory
-
Falk TM, Teugels GG, Abban EK, Villwock W, Renwrantz L (2003) Phylogeographic patterns in populations of the black-chinned tilapia complex (Teleostei, Cichlidae) from coastal areas in West Africa: support for the refuge zone theory. Mol Phylogenet Evol 27:81-92
-
(2003)
Mol Phylogenet Evol
, vol.27
, pp. 81-92
-
-
Falk, T.M.1
Teugels, G.G.2
Abban, E.K.3
Villwock, W.4
Renwrantz, L.5
-
13
-
-
0030766607
-
Rst Calc: A collection of computer programs for calculating estimates of genetic differentiation from microsatellite data and a determining their significance
-
Goodman SJ (1997) Rst Calc: a collection of computer programs for calculating estimates of genetic differentiation from microsatellite data and a determining their significance. Mol Ecol 6:881-885
-
(1997)
Mol Ecol
, vol.6
, pp. 881-885
-
-
Goodman, S.J.1
-
14
-
-
0031888435
-
Introgressive hybridization of tilapias in Zimbabwe
-
Gregg RE, Howard JH, Shonhiwa F (1998) Introgressive hybridization of tilapias in Zimbabwe. J Fish Biol 52:1-10
-
(1998)
J Fish Biol
, vol.52
, pp. 1-10
-
-
Gregg, R.E.1
Howard, J.H.2
Shonhiwa, F.3
-
15
-
-
33847654473
-
-
Goudet J (2001) FSTAT, a program to estimate and test gene diversities and fixation indices version 2.9.3, Update from Goudet 1995. Available from
-
Goudet J (2001) FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3). Update from Goudet 1995. Available from http://www.unil.ch/izea/softwares/fstat.html.
-
-
-
-
16
-
-
0026689178
-
Performing the exact test of Hardy-Weinberg proportions for multiple alleles
-
Guo SW, Thompson EA (1992) Performing the exact test of Hardy-Weinberg proportions for multiple alleles. Biometrics 48:361-372
-
(1992)
Biometrics
, vol.48
, pp. 361-372
-
-
Guo, S.W.1
Thompson, E.A.2
-
17
-
-
33847614999
-
-
Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41:95-98
-
Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41:95-98
-
-
-
-
18
-
-
1642326524
-
Using nuclear haplotypes with microsatellites to study gene flow between recently separated Cichlid species
-
Hey J, Won Y-J, Sivasundar A, Nielsen R, Market JA (2004) Using nuclear haplotypes with microsatellites to study gene flow between recently separated Cichlid species. Mol Ecol 13:909-919
-
(2004)
Mol Ecol
, vol.13
, pp. 909-919
-
-
Hey, J.1
Won, Y.-J.2
Sivasundar, A.3
Nielsen, R.4
Market, J.A.5
-
19
-
-
18344370116
-
An extant fish radiation emerged in an extinct Pleistocene Lake
-
Joyce D, Lunt DH, Bills R, Turner GF, Katongo C, Duftner N, Sturmbauer C, Seehausen O (2005) An extant fish radiation emerged in an extinct Pleistocene Lake. Nature 435:90-94
-
(2005)
Nature
, vol.435
, pp. 90-94
-
-
Joyce, D.1
Lunt, D.H.2
Bills, R.3
Turner, G.F.4
Katongo, C.5
Duftner, N.6
Sturmbauer, C.7
Seehausen, O.8
-
20
-
-
0036276556
-
What, if anything, is a Tilapia? Mitochondrial ND2 phylogeny of Tilapiines and the evolution of parental care system in the African cichlid fishes
-
Klett V, Meyer A (2002) What, if anything, is a Tilapia? Mitochondrial ND2 phylogeny of Tilapiines and the evolution of parental care system in the African cichlid fishes. Mol Biol Evol 19:865-883
-
(2002)
Mol Biol Evol
, vol.19
, pp. 865-883
-
-
Klett, V.1
Meyer, A.2
-
21
-
-
79960610067
-
First record of Oreochromis macrochir (Boulenger, 1912) (Pisces: Cichlidae) from the Limpopo River in South Africa. SAJ
-
Kleynhans CJ, Hoffman A (1993) First record of Oreochromis macrochir (Boulenger, 1912) (Pisces: Cichlidae) from the Limpopo River in South Africa. SAJ Aquat Sci 18:104-107
-
(1993)
Aquat Sci
, vol.18
, pp. 104-107
-
-
Kleynhans, C.J.1
Hoffman, A.2
-
22
-
-
1842427843
-
Adaptive evolution as explosive radiation: The cichlid fish model
-
Kocher TD (2004) Adaptive evolution as explosive radiation: the cichlid fish model. Nature Rev Genet 5:288-298
-
(2004)
Nature Rev Genet
, vol.5
, pp. 288-298
-
-
Kocher, T.D.1
-
23
-
-
0036139211
-
MEGA2: Molecular Evolutionary Genetics Analysis software
-
Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: Molecular Evolutionary Genetics Analysis software. Bioinformatics 17:1244-1245
-
(2001)
Bioinformatics
, vol.17
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
24
-
-
20444429793
-
A second-generation genetic linkage map of tilapia (Oreochromis spp.)
-
Lee BY, Lee WJ, Streelman JT, Carleton KL, Howe AE, Hulata G, Slettan A, Stern JE, Terai Y, Kocher TD (2005) A second-generation genetic linkage map of tilapia (Oreochromis spp.). Genetics 170:237-244
-
(2005)
Genetics
, vol.170
, pp. 237-244
-
-
Lee, B.Y.1
Lee, W.J.2
Streelman, J.T.3
Carleton, K.L.4
Howe, A.E.5
Hulata, G.6
Slettan, A.7
Stern, J.E.8
Terai, Y.9
Kocher, T.D.10
-
25
-
-
0030199463
-
Microsatellite DNA markers for genetic mapping in the tilapia, Oreochromis niloticus
-
Lee WJ, Kocher TD (1996) Microsatellite DNA markers for genetic mapping in the tilapia, Oreochromis niloticus. J Fish Biol 49:169-171
-
(1996)
J Fish Biol
, vol.49
, pp. 169-171
-
-
Lee, W.J.1
Kocher, T.D.2
-
26
-
-
0025066547
-
Monophyletic origin of lake Victoria cichlid fishes suggested by mitochondrial-DNA sequences
-
Meyer A, Kocher TD, Basasibwaki P, Wilson AC (1990) Monophyletic origin of lake Victoria cichlid fishes suggested by mitochondrial-DNA sequences. Nature 347:550-553
-
(1990)
Nature
, vol.347
, pp. 550-553
-
-
Meyer, A.1
Kocher, T.D.2
Basasibwaki, P.3
Wilson, A.C.4
-
27
-
-
0034068720
-
Biochemical genetic markers to identify hybrids between the endemic Oreochromis mossambicus and the alien species, O. niloticus (Pisces: Cichlidae)
-
Moralee RD, Van der Bank FH, Van der Waal BCW (2000) Biochemical genetic markers to identify hybrids between the endemic Oreochromis mossambicus and the alien species, O. niloticus (Pisces: Cichlidae). Water SA 26:263-268
-
(2000)
Water SA
, vol.26
, pp. 263-268
-
-
Moralee, R.D.1
Van der Bank, F.H.2
Van der Waal, B.C.W.3
-
28
-
-
0034841140
-
Classification and phylogenetic relationships of African tilapiine fishes inferred from mitochondrial DNA sequences
-
Nagl S, Tichy H, Mayer WE, Samonte IE, McAndrew BJ, Klein J (2001) Classification and phylogenetic relationships of African tilapiine fishes inferred from mitochondrial DNA sequences. Mol Phylogenet Evol 20:361-374
-
(2001)
Mol Phylogenet Evol
, vol.20
, pp. 361-374
-
-
Nagl, S.1
Tichy, H.2
Mayer, W.E.3
Samonte, I.E.4
McAndrew, B.J.5
Klein, J.6
-
29
-
-
0034701811
-
The origin and age of haplochromine fishes in Lake Victoria, East Africa
-
Nagl S, Tichy H, Mayer WE, Takezaki N, Takahata N, Klein J (2000) The origin and age of haplochromine fishes in Lake Victoria, East Africa. Proc R Soc Lond B Biol Sci 267:1049-1061
-
(2000)
Proc R Soc Lond B Biol Sci
, vol.267
, pp. 1049-1061
-
-
Nagl, S.1
Tichy, H.2
Mayer, W.E.3
Takezaki, N.4
Takahata, N.5
Klein, J.6
-
31
-
-
0031773680
-
Modeltest: Testing the model of DNA substitution
-
Posada D, Crandall KA (1998) Modeltest: testing the model of DNA substitution. Bioinformatics 14:817-818
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
32
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945-959
-
(2000)
Genetics
, vol.155
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
33
-
-
33847667277
-
-
Raymond M, Rousset F (1995) GENEPOP version 1.2, a population genetics software for exact tests and ecumenicism. J Hered 86:248-249
-
Raymond M, Rousset F (1995) GENEPOP (version 1.2): a population genetics software for exact tests and ecumenicism. J Hered 86:248-249
-
-
-
-
34
-
-
0037304570
-
Large extent of mitochondrial DNA transfer from Oreochromis aureus to O-niloticus in West Africa
-
Rognon X, Guyomard R (2003) Large extent of mitochondrial DNA transfer from Oreochromis aureus to O-niloticus in West Africa. Mol Ecol 12:435-445
-
(2003)
Mol Ecol
, vol.12
, pp. 435-445
-
-
Rognon, X.1
Guyomard, R.2
-
35
-
-
2442507758
-
Genetic diversity in farmed Asian Nile and red hybrid tilapia stocks evaluated from microsatellite and mitochondrial DNA analysis
-
Romana-Eguia MRR, Ikeda M, Basiao ZU, Taniguchi N (2004) Genetic diversity in farmed Asian Nile and red hybrid tilapia stocks evaluated from microsatellite and mitochondrial DNA analysis. Aquaculture 236:131-150
-
(2004)
Aquaculture
, vol.236
, pp. 131-150
-
-
Romana-Eguia, M.R.R.1
Ikeda, M.2
Basiao, Z.U.3
Taniguchi, N.4
-
36
-
-
0036006242
-
Speciation via introgressive hybridization in East African cichlids?
-
Salzburger C, Baric S, Sturmbauer C (2002) Speciation via introgressive hybridization in East African cichlids? Mol Ecol 11:619-625
-
(2002)
Mol Ecol
, vol.11
, pp. 619-625
-
-
Salzburger, C.1
Baric, S.2
Sturmbauer, C.3
-
37
-
-
0036205377
-
TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing
-
Schmidt HA, Strimmer K, Vingron M, von Haeseler A (2002) TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18:502-504
-
(2002)
Bioinformatics
, vol.18
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
von Haeseler, A.4
-
38
-
-
0029476621
-
The introduced Oreochromis niloticus is spreading on the Kafue floodplain, Zambia
-
Schwank EJ (1995) The introduced Oreochromis niloticus is spreading on the Kafue floodplain, Zambia. Hydrobiologia 315:143-147
-
(1995)
Hydrobiologia
, vol.315
, pp. 143-147
-
-
Schwank, E.J.1
-
39
-
-
1642375725
-
Hybridization and adaptive radiation
-
Seehausen O (2004) Hybridization and adaptive radiation. TREE 19:198-207
-
(2004)
TREE
, vol.19
, pp. 198-207
-
-
Seehausen, O.1
-
40
-
-
0037460210
-
Nuclear markers reveal unexpected genetic variation and a Congolese-Nilotic origin of the Lake Victoria cichlid species flock
-
Seehausen O, Koetsier E, Schneider MV, Chapman LJ, Chapman CA, Knight ME, Turner GF, van Alphen JJM, Bills R (2003) Nuclear markers reveal unexpected genetic variation and a Congolese-Nilotic origin of the Lake Victoria cichlid species flock. Proc R Soc Lond B 270:129-137
-
(2003)
Proc R Soc Lond B
, vol.270
, pp. 129-137
-
-
Seehausen, O.1
Koetsier, E.2
Schneider, M.V.3
Chapman, L.J.4
Chapman, C.A.5
Knight, M.E.6
Turner, G.F.7
van Alphen, J.J.M.8
Bills, R.9
-
43
-
-
12444271147
-
Seeing ghosts: The effect of unsampled populations on migration rates estimated for sampled populations
-
Slatkin M (2005) Seeing ghosts: the effect of unsampled populations on migration rates estimated for sampled populations. Mol Ecol 14:67-73
-
(2005)
Mol Ecol
, vol.14
, pp. 67-73
-
-
Slatkin, M.1
-
44
-
-
0034762116
-
The freshwater fish of Neogene Africa (Miocene-Pleistocene): Systematics and biogeography
-
Stewart KM (2001) The freshwater fish of Neogene Africa (Miocene-Pleistocene): systematics and biogeography. Fish Fisheries 2:177-230
-
(2001)
Fish Fisheries
, vol.2
, pp. 177-230
-
-
Stewart, K.M.1
-
45
-
-
0035140412
-
Lake level fluctuations synchronize genetic divergences of cichlid fishes in African Lakes
-
Sturmbauer C, Baric S, Salzburger W, Rüber L, Verheyen E (2001) Lake level fluctuations synchronize genetic divergences of cichlid fishes in African Lakes. Mol Biol Evol 18:144-154
-
(2001)
Mol Biol Evol
, vol.18
, pp. 144-154
-
-
Sturmbauer, C.1
Baric, S.2
Salzburger, W.3
Rüber, L.4
Verheyen, E.5
-
46
-
-
0027157960
-
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
-
Tamura K, Nei M (1993) Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 10:512-526
-
(1993)
Mol Biol Evol
, vol.10
, pp. 512-526
-
-
Tamura, K.1
Nei, M.2
-
48
-
-
33847660690
-
-
Turner GF (2003) Oreochromis (Nyasalapia) karongae (Trewavas). http://malawicichlids.com/mw10001a.htm. In: The Cichlid Fishes of Lake Malawi, Africa (M. K. Oliver, webmaster), http://malawicichlids.com. Accessed September 2005
-
Turner GF (2003) Oreochromis (Nyasalapia) karongae (Trewavas). http://malawicichlids.com/mw10001a.htm. In: "The Cichlid Fishes of Lake Malawi, Africa" (M. K. Oliver, webmaster), http://malawicichlids.com. Accessed September 2005
-
-
-
-
49
-
-
33847676604
-
Part 2: An annotated checklist of the fish fauna of the river Shire south of Kapachira Falls
-
Malawi
-
Tweddle D, Willoughby NG (1979) Part 2: An annotated checklist of the fish fauna of the river Shire south of Kapachira Falls, Malawi. Ichthyol Bull JLB Smith Inst Ichthyol 39:10-12
-
(1979)
Ichthyol Bull JLB Smith Inst Ichthyol
, vol.39
, pp. 10-12
-
-
Tweddle, D.1
Willoughby, N.G.2
-
50
-
-
33750646201
-
Part1: The nature of the barrier separating the Lake Malawi and Zambezi fish faunas
-
Tweddle D, Lewis DSC (1979) Part1: the nature of the barrier separating the Lake Malawi and Zambezi fish faunas. Ichthyol Bull JLB Smith Instit Ichthyol 39:1-9
-
(1979)
Ichthyol Bull JLB Smith Instit Ichthyol
, vol.39
, pp. 1-9
-
-
Tweddle, D.1
Lewis, D.S.C.2
-
51
-
-
19944410526
-
Migration barriers protect indigenous brown trout (Salmo trutta) population from introgressions with stocked hatchery fish
-
Van Houdt JKJ, Pinceel J, Flamand M-C, Briquet M, Dupont E, Volkaert FAM, Baret PV (2005) Migration barriers protect indigenous brown trout (Salmo trutta) population from introgressions with stocked hatchery fish. Conserv Genet 6:175-191
-
(2005)
Conserv Genet
, vol.6
, pp. 175-191
-
-
Van Houdt, J.K.J.1
Pinceel, J.2
Flamand, M.-C.3
Briquet, M.4
Dupont, E.5
Volkaert, F.A.M.6
Baret, P.V.7
-
52
-
-
0034003689
-
Oreochromis niloticus (Teleostei: Cichlidae) now in the Limpopo River System
-
Van der Waal BCW, Bills R (2000) Oreochromis niloticus (Teleostei: Cichlidae) now in the Limpopo River System. S Afr J Sci 96:47-48
-
(2000)
S Afr J Sci
, vol.96
, pp. 47-48
-
-
Van der Waal, B.C.W.1
Bills, R.2
-
53
-
-
33645859299
-
What is a population? An empirical evaluation of some genetic methods for identifying the number of gene pools and their degree of connectivity
-
Waples RS, Gaggiotti O (2006) What is a population? An empirical evaluation of some genetic methods for identifying the number of gene pools and their degree of connectivity. Mol Ecol 15:1419-1439
-
(2006)
Mol Ecol
, vol.15
, pp. 1419-1439
-
-
Waples, R.S.1
Gaggiotti, O.2
-
54
-
-
0021566877
-
Estimating F-statistics for the analysis of population structure
-
Weir BS, Cockerham CC (1984) Estimating F-statistics for the analysis of population structure. Evolution 38:1358-1370
-
(1984)
Evolution
, vol.38
, pp. 1358-1370
-
-
Weir, B.S.1
Cockerham, C.C.2
-
55
-
-
0001874713
-
Observations on the biology of the introduced species of Tilapia in Lake Victoria
-
Welcomme R (1967) Observations on the biology of the introduced species of Tilapia in Lake Victoria. Revue Zool Bot Afr 76:249-279
-
(1967)
Revue Zool Bot Afr
, vol.76
, pp. 249-279
-
-
Welcomme, R.1
-
57
-
-
0028064845
-
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
-
Yang ZH (1994) Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J Mol Evol 39:306-314
-
(1994)
J Mol Evol
, vol.39
, pp. 306-314
-
-
Yang, Z.H.1
|