메뉴 건너뛰기




Volumn 52, Issue 2, 2007, Pages 215-223

Selection and development of representative simple sequence repeat primers and multiplex SSR sets for high throughput automated genotyping in maize

Author keywords

Capillary electrophoresis; Core primer; Fluorescent labelled; Maize; Multiplex PCR; SSR

Indexed keywords

ZEA MAYS;

EID: 33847620208     PISSN: 10016538     EISSN: 18619541     Source Type: Journal    
DOI: 10.1007/s11434-007-0038-y     Document Type: Article
Times cited : (15)

References (34)
  • 1
    • 0030266285 scopus 로고    scopus 로고
    • Maize simple sequence repetitive DNA sequences: Abundance and allele variation
    • Chin E C L, Senior M L, Shu H, et al. Maize simple sequence repetitive DNA sequences: Abundance and allele variation. Genome, 1996, 39: 866-873
    • (1996) Genome , vol.39 , pp. 866-873
    • Chin, E.C.L.1    Senior, M.L.2    Shu, H.3
  • 2
    • 0036010770 scopus 로고    scopus 로고
    • Data mining for simple sequence repeats in expressed sequence tags from barley, maize, rice, sorghum and wheat
    • Kantety R V, Rota M L, Matthews D E, et al. Data mining for simple sequence repeats in expressed sequence tags from barley, maize, rice, sorghum and wheat. Plant Mol Biol, 2002, 48: 501-510
    • (2002) Plant Mol Biol , vol.48 , pp. 501-510
    • Kantety, R.V.1    Rota, M.L.2    Matthews, D.E.3
  • 3
    • 0036010771 scopus 로고    scopus 로고
    • Development and mapping of SSR markers for maize
    • Sharopova N, McMullen M D, Schultz L, et al. Development and mapping of SSR markers for maize. Plant Mol Biol, 2002, 48: 463-481
    • (2002) Plant Mol Biol , vol.48 , pp. 463-481
    • Sharopova, N.1    McMullen, M.D.2    Schultz, L.3
  • 4
    • 33644765129 scopus 로고    scopus 로고
    • Unigene derived microsatellite markers for the cereal genomes
    • Parida S K, Kumar K A R, Dalal V, et al. Unigene derived microsatellite markers for the cereal genomes. Theor Appl Genet, 2006, 112: 808-817
    • (2006) Theor Appl Genet , vol.112 , pp. 808-817
    • Parida, S.K.1    Kumar, K.A.R.2    Dalal, V.3
  • 5
    • 0036238075 scopus 로고    scopus 로고
    • SSR variation in important U.S. maize inbred lines
    • Gethi J G, Labate J A, Lamkey K R, et al. SSR variation in important U.S. maize inbred lines. Crop Sci, 2002, 42 (3): 951-957
    • (2002) Crop Sci , vol.42 , Issue.3 , pp. 951-957
    • Gethi, J.G.1    Labate, J.A.2    Lamkey, K.R.3
  • 6
    • 77955115721 scopus 로고    scopus 로고
    • Serial study on the establishment of DNA fingerprint of new maize varieties in China III: The use of multiplex PCR technique in maize SSR primer amplification
    • Wang F G, Zhao J R, Guo J L, et al. Serial study on the establishment of DNA fingerprint of new maize varieties in China III: The use of multiplex PCR technique in maize SSR primer amplification. Maize Sci (in Chinese), 2003, 11(4): 3-6
    • (2003) Maize Sci (in Chinese) , vol.11 , Issue.4 , pp. 3-6
    • Wang, F.G.1    Zhao, J.R.2    Guo, J.L.3
  • 7
    • 13244275287 scopus 로고    scopus 로고
    • Assessing temporal changes in genetic diversity of maize varieties using microsatellite markers
    • Clerc V L, Bazante F, Baril C, et al. Assessing temporal changes in genetic diversity of maize varieties using microsatellite markers. Theor Appl Genet, 2005, 110: 294-302
    • (2005) Theor Appl Genet , vol.110 , pp. 294-302
    • Clerc, V.L.1    Bazante, F.2    Baril, C.3
  • 8
    • 33847629375 scopus 로고    scopus 로고
    • New Maize Varieties in China
    • Maize Varieties in 2004 in Chinese, Beiiing: Agricultural Science & Technology Press
    • Liao Q, Sun S X. New Maize Varieties in China: Regional Experimental Report on National Maize Varieties in 2004 (in Chinese). Beiiing: Agricultural Science & Technology Press, 2004
    • (2004) Regional Experimental Report on National
    • Liao, Q.1    Sun, S.X.2
  • 9
    • 8444231320 scopus 로고    scopus 로고
    • Genetic diversity among CIMMYT maize inbred lines investigated with SSR marke I. Lowland tropical maize
    • Xia X C, Reif J C, Melchinger A E, et al. Genetic diversity among CIMMYT maize inbred lines investigated with SSR marke I. Lowland tropical maize. Crop Sci, 2004, 44(6): 2230-2237
    • (2004) Crop Sci , vol.44 , Issue.6 , pp. 2230-2237
    • Xia, X.C.1    Reif, J.C.2    Melchinger, A.E.3
  • 10
    • 0036888784 scopus 로고    scopus 로고
    • Genetic characterization of CIMMYT inbred maize lines and open pollinated populations using large scale fingerprinting methods
    • Marilyn L, Warburton M L, Xia X C, et al. Genetic characterization of CIMMYT inbred maize lines and open pollinated populations using large scale fingerprinting methods. Crop Sci, 2002, 42(6): 1832-1840
    • (2002) Crop Sci , vol.42 , Issue.6 , pp. 1832-1840
    • Marilyn, L.1    Warburton, M.L.2    Xia, X.C.3
  • 11
    • 0030774039 scopus 로고    scopus 로고
    • A evaluation of the utility of SSR loci as molecular markers in maize (Zea mays L): Comparisons with data from RFLPs and pedigree
    • Smith J S C, Chin E C L, Shu H, et al. A evaluation of the utility of SSR loci as molecular markers in maize (Zea mays L): Comparisons with data from RFLPs and pedigree. Theor Appl Genet, 1997, 95: 163-173
    • (1997) Theor Appl Genet , vol.95 , pp. 163-173
    • Smith, J.S.C.1    Chin, E.C.L.2    Shu, H.3
  • 12
    • 0347579843 scopus 로고    scopus 로고
    • Microsatellites in Zea-variability, patterns of mutations, and use for evolutionary studies
    • Matsuoka Y, Mitchell S E, Kresovich S, et al. Microsatellites in Zea-variability, patterns of mutations, and use for evolutionary studies. Theor Appl Genet, 2002, 104: 436-450
    • (2002) Theor Appl Genet , vol.104 , pp. 436-450
    • Matsuoka, Y.1    Mitchell, S.E.2    Kresovich, S.3
  • 13
    • 0034823292 scopus 로고    scopus 로고
    • Molecular marker diversity among current and historical maize inbreds
    • Lu H, Bernardo R. Molecular marker diversity among current and historical maize inbreds. Theor Appl Genet, 2001, 103: 613-617
    • (2001) Theor Appl Genet , vol.103 , pp. 613-617
    • Lu, H.1    Bernardo, R.2
  • 14
    • 33847623143 scopus 로고    scopus 로고
    • Application of SSR labeling technique in the assay of seed purity of hybrid maize
    • Li X H, Li X H, Li W H, et al. Application of SSR labeling technique in the assay of seed purity of hybrid maize. Crop J (in Chinese), 2003, 29(1): 63-68.
    • (2003) Crop J (in Chinese) , vol.29 , Issue.1 , pp. 63-68
    • Li, X.H.1    Li, X.H.2    Li, W.H.3
  • 15
    • 33847676945 scopus 로고    scopus 로고
    • Teng W T. Division of hybrid maize preponderance population and localization of agronomic trait QTL by molecular labeling. Dissertation for the Doctoral Degree (in Chinese). Beijing: China Agricultural University, 2002
    • Teng W T. Division of hybrid maize preponderance population and localization of agronomic trait QTL by molecular labeling. Dissertation for the Doctoral Degree (in Chinese). Beijing: China Agricultural University, 2002
  • 16
    • 0347927439 scopus 로고    scopus 로고
    • SSR analysis of genetic diversity among maize inbred lines adapted to cold regions of Japan
    • Enoki H, Sato H, Koinuma K. SSR analysis of genetic diversity among maize inbred lines adapted to cold regions of Japan. Theor Appl Genet, 2002, 104: 1270-1277
    • (2002) Theor Appl Genet , vol.104 , pp. 1270-1277
    • Enoki, H.1    Sato, H.2    Koinuma, K.3
  • 17
    • 0037287465 scopus 로고    scopus 로고
    • Simple sequence repeat polymorphism in Quality Protein Maize (QPM) lines
    • Bantte K, Prasanna B M. Simple sequence repeat polymorphism in Quality Protein Maize (QPM) lines. Euphytica, 2003, 129: 337-344
    • (2003) Euphytica , vol.129 , pp. 337-344
    • Bantte, K.1    Prasanna, B.M.2
  • 18
    • 0038324569 scopus 로고    scopus 로고
    • Development and analysis of multiplex microsatellite markers sets in common bean (Phaseolus vulgaris L.)
    • Masi P, Zeuli P L S, Donini P. Development and analysis of multiplex microsatellite markers sets in common bean (Phaseolus vulgaris L.). Mol Breed, 2003, 11: 303-313
    • (2003) Mol Breed , vol.11 , pp. 303-313
    • Masi, P.1    Zeuli, P.L.S.2    Donini, P.3
  • 19
    • 0037295602 scopus 로고    scopus 로고
    • Molecular and cytological analyses of large tracks of centromeric DNA reveal the structure and evolutionary dynamics of maize centromeres
    • Nagaki K, Song J, Stupar R M, et al. Molecular and cytological analyses of large tracks of centromeric DNA reveal the structure and evolutionary dynamics of maize centromeres. Genetics, 2003, 163: 759-770
    • (2003) Genetics , vol.163 , pp. 759-770
    • Nagaki, K.1    Song, J.2    Stupar, R.M.3
  • 20
    • 0034974801 scopus 로고    scopus 로고
    • A representative, highly informative 'genotyping set' of barley SSRs
    • Macaulay M, Ramsay L, Powell W, et al. A representative, highly informative 'genotyping set' of barley SSRs. Theor Appl Genet, 2001, 102: 801-809
    • (2001) Theor Appl Genet , vol.102 , pp. 801-809
    • Macaulay, M.1    Ramsay, L.2    Powell, W.3
  • 21
    • 0142123062 scopus 로고    scopus 로고
    • Assessment of EST- and genomic microsatellite markers for variety discrimination and genetic diversity studies in wheat
    • Leigh F, Lea V, Law J, et al. Assessment of EST- and genomic microsatellite markers for variety discrimination and genetic diversity studies in wheat. Euphytica, 2003, 133: 359-366
    • (2003) Euphytica , vol.133 , pp. 359-366
    • Leigh, F.1    Lea, V.2    Law, J.3
  • 22
    • 1842736093 scopus 로고    scopus 로고
    • Selection of highly informative and user-friendly microsatellites (SSRs) for genotyping of cultivated potato
    • Ghislain M, Spooner D M, Rodriguez F, et al. Selection of highly informative and user-friendly microsatellites (SSRs) for genotyping of cultivated potato. Theor Appl Genet, 2004, 108: 881-890
    • (2004) Theor Appl Genet , vol.108 , pp. 881-890
    • Ghislain, M.1    Spooner, D.M.2    Rodriguez, F.3
  • 23
    • 0031729519 scopus 로고    scopus 로고
    • Application of microsatellites from maize to teosinte and other relatives of maize
    • Lübberstedt T, Dussle C, Melchinger A E. Application of microsatellites from maize to teosinte and other relatives of maize. Plant Breed, 1998, 117: 447-450
    • (1998) Plant Breed , vol.117 , pp. 447-450
    • Lübberstedt, T.1    Dussle, C.2    Melchinger, A.E.3
  • 24
    • 16844363621 scopus 로고    scopus 로고
    • Establishment of an effective set of simple sequence repeat markers for sunflower variety identification and diversity assessment
    • Zhang L S, Clerc V L, Li S, et al. Establishment of an effective set of simple sequence repeat markers for sunflower variety identification and diversity assessment. Can J Bot, 2005, 83(1): 66-72
    • (2005) Can J Bot , vol.83 , Issue.1 , pp. 66-72
    • Zhang, L.S.1    Clerc, V.L.2    Li, S.3
  • 25
    • 3142752174 scopus 로고    scopus 로고
    • Identification of Canadian durum wheat varieties using a single PCR
    • Daniel J, Perry. Identification of Canadian durum wheat varieties using a single PCR. Theor Appl Genet, 2004, 109: 55-61
    • (2004) Theor Appl Genet , vol.109 , pp. 55-61
    • Daniel, J.1    Perry2
  • 26
    • 3142667084 scopus 로고    scopus 로고
    • Molecular characterization of Asian maize inbred lines by multiple laboratories
    • George M L C, Regalado E, Li W, et al. Molecular characterization of Asian maize inbred lines by multiple laboratories. Theor Appl Genet, 2004, 109: 80-91
    • (2004) Theor Appl Genet , vol.109 , pp. 80-91
    • George, M.L.C.1    Regalado, E.2    Li, W.3
  • 27
    • 0442298584 scopus 로고    scopus 로고
    • Suitability of mapped sequence tagged microsatellite site markers for establishing distinctness, uniformity and stability in aromatic rice
    • Singh R K, Sharma R K, Singh A K, et al. Suitability of mapped sequence tagged microsatellite site markers for establishing distinctness, uniformity and stability in aromatic rice. Euphytica, 2004, 135: 135-143
    • (2004) Euphytica , vol.135 , pp. 135-143
    • Singh, R.K.1    Sharma, R.K.2    Singh, A.K.3
  • 28
    • 19944427794 scopus 로고    scopus 로고
    • This P, Jung A, Boccacci P, et al. Development of a standard set of microsatellite reference alleles for identification of grape cultivars. Theor Appl Genet, 2004, 109: 1448-1458
    • This P, Jung A, Boccacci P, et al. Development of a standard set of microsatellite reference alleles for identification of grape cultivars. Theor Appl Genet, 2004, 109: 1448-1458
  • 29
    • 0037855699 scopus 로고    scopus 로고
    • The development of multiplex simple sequence repeat (SSR) markers to complement distinctness, uniformity and stability testing of rape (Brassica napus L.) varieties
    • Tommasini L, Batley J, Arnold G M, et al. The development of multiplex simple sequence repeat (SSR) markers to complement distinctness, uniformity and stability testing of rape (Brassica napus L.) varieties. Theor Appl Genet, 2003, 106: 1091-1101
    • (2003) Theor Appl Genet , vol.106 , pp. 1091-1101
    • Tommasini, L.1    Batley, J.2    Arnold, G.M.3
  • 30
    • 0031671801 scopus 로고    scopus 로고
    • The use of semi-automated fluorescent microsatellite analysis for tomato cultivar identification
    • Bredemeijer G M M, Arens P, Wouters D, et al. The use of semi-automated fluorescent microsatellite analysis for tomato cultivar identification. Theor Appl Genet, 1998, 97: 584-590
    • (1998) Theor Appl Genet , vol.97 , pp. 584-590
    • Bredemeijer, G.M.M.1    Arens, P.2    Wouters, D.3
  • 31
    • 0037482958 scopus 로고    scopus 로고
    • PCR-multiplexes for a genome- wide framework of simple sequence repeat marker loci in cultivated sunflower
    • Tang S X, Kishore V K, Knapp S J. PCR-multiplexes for a genome- wide framework of simple sequence repeat marker loci in cultivated sunflower. Theor Appl Genet, 2003, 107: 6-19
    • (2003) Theor Appl Genet , vol.107 , pp. 6-19
    • Tang, S.X.1    Kishore, V.K.2    Knapp, S.J.3
  • 32
    • 0033938676 scopus 로고    scopus 로고
    • Chromosomal assignment of microsatellite loci in cotton
    • Liu S, Saha S, Stelly D, et al. Chromosomal assignment of microsatellite loci in cotton. J Hered, 2000, 91: 326-332
    • (2000) J Hered , vol.91 , pp. 326-332
    • Liu, S.1    Saha, S.2    Stelly, D.3
  • 33
    • 0036889271 scopus 로고    scopus 로고
    • Design and application of microsatellite marker panels for semiautomated genotyping of rice (Oryza sativa L)
    • Coburn J R, Temnykh S V, Paul E M, et al. Design and application of microsatellite marker panels for semiautomated genotyping of rice (Oryza sativa L). Crop Science, 2002, 42(6): 2092-2099
    • (2002) Crop Science , vol.42 , Issue.6 , pp. 2092-2099
    • Coburn, J.R.1    Temnykh, S.V.2    Paul, E.M.3
  • 34
    • 0034037827 scopus 로고    scopus 로고
    • Development of multiplex sets of simple sequence repeat DNA markers covering the soybean genome
    • Narvel J M, Chu W C, Fehr W R, et al. Development of multiplex sets of simple sequence repeat DNA markers covering the soybean genome. Mol Breed, 2000, 6: 175-183
    • (2000) Mol Breed , vol.6 , pp. 175-183
    • Narvel, J.M.1    Chu, W.C.2    Fehr, W.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.