Intraspecific variation of Rhizoctonia solani AG 3 isolates recovered from potato fields in Central Iran and South Australia

Mycopathologia

Volumn 163, Issue 2, 2007, Pages 105-115

  Balali, G R ^a,b   Neate, S M ^c   Kasalkheh, A M ^a   Stodart, B J ^b   Melanson, D L ^d   Scott, E S ^b  

^a UNIVERSITY OF ISFAHAN   (Iran)

^b UNIVERSITY OF ADELAIDE   (Australia)

^c NORTH DAKOTA STATE UNIVERSITY   (United States)

^d SOUTH AUSTRALIAN RESEARCH AND DEVELOPMENT INSTITUTE   (Australia)

Author keywords

Black scurf; Genetic variation; Pectic isozymes; Potato; Rhizoctonia

Indexed keywords

BACTERIAL DNA; CARBOXYLESTERASE; PECTIN; PECTINESTERASE; POLYGALACTURONASE;

ARTICLE; AUSTRALIA; GENETIC VARIABILITY; GENETICS; GENOTYPE; HYPHOMYCETES; IRAN; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; PLANT ROOT; PLANT STEM; POLYMERASE CHAIN REACTION; POTATO; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SOUTHERN BLOTTING; SPECIES DIFFERENCE;

BLOTTING, SOUTHERN; CARBOXYLIC ESTER HYDROLASES; DNA, BACTERIAL; GENOTYPE; IRAN; PECTINS; PLANT ROOTS; PLANT STEMS; POLYGALACTURONASE; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RHIZOCTONIA; SOLANUM TUBEROSUM; SOUTH AUSTRALIA; SPECIES SPECIFICITY; VARIATION (GENETICS);

HYPHOMYCETES; RHIZOCTONIA; SOLANUM TUBEROSUM; THANATEPHORUS CUCUMERIS; TUBER (TRUFFLE);

EID: 33847246370     PISSN: 0301486X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11046-006-0089-7     Document Type: Article

References (40)

1. Adams GC. Thanatephorus cucumeris (Rhizoctonia solani) a species complex of wide host range. Adv Plant Pathol 1988; 6: 535-552.
2. Micales JA, Bonde MR, Peterson GL. The use of isozyme analysis in fungal taxonomy and genetics. Mycotaxon 1986; 27: 405-449.
3. Liu ZL, Sinclair JB. Genetic diversity of Rhizoctonia solani anastomosis group 2. Phytopathology 1992; 82: 778-787.
4. Schneider JHM, Salazar O, Rubio V, Keijer J. Identification of Rhizoctonia solani associated with field-grown tulips using ITS rDNA polymorphism and pectic enzymes. Eur J Plant Pathol 1997; 103: 607-622.
5. Clark J, Butters J, Brent KJ, Hollomon DW. Isozyme uniformity in Erysiphe graminis f.sp. hordei. Mycol Res 1989; 92: 404-409.
6. Goodwin SB, Webster RK, Allard RW. Evidence for mutation and migration as sources of genetic variation in populations of Rhynchosporium secalis. Phytopathology 1994; 84: 1047-1053.
7. Meijer G, Megnegneau B, Linders EGA. Variability for isozyme, vegetative compatibility and RAPD markers in natural populations of Phomopsis subordinaria. Mycol Res 1994; 98: 267-276.
8. McDonald BA. The population genetics of fungi: Tools and techniques. Phytopathology 1997; 87: 448-453.
9. Stummer BE, Zanker T, Scott ES, Whisson DL. Genetic diversity in populations of Uncinula necator: Comparison of RFLP and PCR-based approaches. Mycol Res 2000; 104: 44-52.
10. Duncan S, Barton JE, O'Brien PA. Analysis of variation in isolates of Rhizoctonia solani by random amplified polymorphic DNA assay. Mycol Res 1993; 97: 1075-1082.
11. Salazar O, Schneider JHM, Juliá n MC, Keijer J, Rubio V. Phylogenetic subgrouping of Rhizoctonia solani AG 2 isolates based on ribosomal ITS sequences. Mycologia 1999; 91: 459-467.
12. Cruickshank RH. Pectic zymograms as criteria in taxonomy of Rhizoctonia. Mycol Res 1990; 94: 938-946.
13. MacNish GC, Sweetingham MW. Evidence of stability of pectic zymogram groups within Rhizoctonia solani AG-8. Mycol Res 1993; 97: 1056-1058.
14. Neate SM, Cruickshank RH, Rovira AD. Pectic enzyme patterns of Rhizoctonia solani isolates from agricultural soils in South Australia. Trans Br Mycol Soc 1988; 90: 37-42.
15. Sweetingham MW, Cruickshank RH, Wong DH. Pectic zymograms and taxonomy and pathogenicity of the Ceratobasidiaceae. Trans Br Mycol Soc 1986; 86: 305-311.
16. MacNish GC, Carling DE, Sweetingham MW, Brainard KA. Anastomosis group (AG) affinity of pectic isozyme (zymogram) groups (ZG) of Rhizoctonia solani from the Western Australia cereal-belt. Mycol Res 1994; 98: 1369-1375.
17. Jabaji-Hare SH, Meller Y, Gill S, Charest PM. Investigation of genetic relatedness among anastomosis groups of Rhizoctonia solani using cloned DNA probes. Can J Plant Pathol 1990; 12: 393-404.
18. Balali GR, Whisson DL, Scott ES, Neate SM. DNA fingerprinting probe specific to isolates of Rhizoctonia solani AG-3. Mycol Res 1996; 100: 467-470.
19. Matthew J, Whisson D. DNA probe specific to Rhizoctonia solani anastomosis group 8. Mycol Res 1995; 99: 745-750.
20. Weining S, Langridge P. Identification and mapping of polymorphisms in cereals based on the polymerase chain reaction. Theor Appl Genet 1991; 182: 209-216.
21. Kuninaga S, Natsuaki T, Takeuchi T, Yokosawa R. Sequence variation in the rDNA ITS regions within and between anastomosis groups in Rhizoctonia solani. Curr Genet 1997; 32: 237-243.
22. Pope EJ, Carter DA. Phylogenetic placement and host specificity of mycorrhizal isolates belonging to AG-6 and AG-12 in the Rhizoctonia solani species complex. Mycologia 2001; 93: 712-719.
23. Guillemaut C, Edel-Hermann V, Camporota P, Alabouvette C, Richard-Molard M, Steinberg C. Typing of anastomosis groups of Rhizoctonia solani by restriction analysis of ribosomal DNA. Can J Microbiol 2003; 49: 556-568.
24. Balali GR, Neate SM, Scott ES, Whisson DL, Wicks TJ. Anastomosis group and pathogenicity of isolates of Rhizoctonia solani from potato crops in South Australia. Plant Pathol 1995; 44: 1050-1057.
25. Parmeter JR, Sherwood RT, Platt WD. Anastomosis grouping among isolates of Thanatephorus cucumeris. Phytopathology 1969; 59: 1270-1278.
26. Cruickshank RH, Wade GC. Detection of pectic enzymes in pectin-acrylamide gels. Anal Biochem 1980; 107: 177-181.
27. Cruickshank RH. Distinction between Sclerotinia species by their pectic zymograms. Trans Br Mycol Soc 1983; 80: 117-119.
28. Balali GR. Genetic variation of Rhizoctonia solani AG-3 in South Australia. PhD thesis. The University of Adelaide, Australia, 1996; 189 pp.
29. Sambrook J, Fritsch EF, Maniatis T. Molecular Cloning: A Laboratory Manual (2nd ed.). New York: Cold Spring Harbor, 1989.
30. Hollander M, Wolfe DA. Nonparametric Statistical Methods. NY: John Wiley and Sons, 1999; 800 pp.
31. Lynch M. The similarity index and DNA fingerprinting. Mol Biol Evol 1990; 7: 478-484.
32. Nei M, Li WH. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci U S A 1979; 76: 5269-5273.
33. Laroche JP, Jabaji-Hare SH, Charest PM. Differentiation of two anastomosis groups of Rhizoctonia solani by isozyme analysis. Phytopathology 1992; 82: 1387-1393.
34. Yang HA, Zhou J, Sivasithamparam K, Tommerup IC, Barton JE, O'Brien PA. Genetic variability in pectic enzymes of Rhizoctonia solani isolates causing bare-patch disease of cereals. J Phytopathol 1994; 141: 259-266.
35. O'Brien PA, Vidyani M, Zamani MR. Pectic enzymes as virulence factors in Rhizoctonia solani AG 8 strains. International Symposium on Rhizoctonia (Proceeding) Noordwijkerhout, the Netherlands June 1995: 3-4.
36. Barker KR, Walker JC. Relationship of pectolytic and cellulytic enzyme production by strains of Pellicularia filamentosa to their pathogenicity. Phytopathology 1962; 52: 1119-1125.
37. Gudmestad NC, Zink RT, Huguelet JE. The effect of harvest date and tuber-borne sclerotia on the severity of Rhizoctonia disease of potato. Am Potato J 1979; 56: 35-41.
38. James WC, McKenzie AR. The effect of tuber-borne sclerotia of Rhizoctonia solani Kuhn on the potato crop. Am Potato J 1972; 49: 296-301.
39. Weinhold AR, Bowman T, Hall DH. Rhizoctonia disease of potato: Effect on yield and control by seed tuber treatment. Plant Dis 1982; 66: 815-818.
40. Frank JA. Rhizoctonia canker (black scurf). In: Hooker WJ, ed. Compendium of Potato Diseases, APS Press, Minnesota, USA, 1981: 52-54.