Purification and characterization of pepsinogens from the gastric mucosa of African coelacanth, Latimeria chalumnae, and properties of the major pepsins

Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology

Volumn 146, Issue 3, 2007, Pages 412-420

  Tanji, Masao ^a   Yakabe, Etsuko ^a,b   Kageyama, Takashi ^c   Yokobori, Shin ichi ^d   Ichinose, Masao ^e   Miki, Kazumasa ^e   Ito, Hisashi ^b   Takahashi, Kenji ^a,d  

^a UNIVERSITY OF TOKYO   (Japan)

^b AOYAMA GAKUIN UNIVERSITY   (Japan)

^c KYOTO UNIVERSITY   (Japan)

^d TOKYO UNIVERSITY OF PHARMACY AND LIFE SCIENCES   (Japan)

^e UNIVERSITY OF TOKYO   (Japan)

Author keywords

Coelacanth; Latimeria chalumnae; N terminal amino acid sequence; Pepsin; Pepsinogen; Pepstatin; Phylogenetic tree; Propeptide

Indexed keywords

PEPSIN A; PEPSINOGEN I; PEPSINOGEN II;

ACIDITY; AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; FISH; HUMAN; LATIMERIA CHALUMNAE; MOLECULAR WEIGHT; NONHUMAN; PH; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN MODIFICATION; PROTEIN PURIFICATION; RAT; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; STOMACH MUCOSA;

ACTINOPTERYGII; COELACANTHIDAE; COELACANTHIMORPHA; LATIMERIA CHALUMNAE; MAMMALIA; TETRAPODA;

EID: 33847220031     PISSN: 10964959     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cbpb.2006.11.025     Document Type: Article

References (33)

1. Anson M.L. The estimation of pepsin, trypsin, papain, and cathepsin with hemoglobin. J. Gen. Physiol. 22 (1938) 79-89
2. Athauda S.B.P., and Takahashi K. Cleavage specificities of aspartic proteinases toward oxidized insulin B chain at different pH values. Protein, Peptide Lett. 9 (2002) 289-294
3. 2-terminal amino acid sequences and some other properties of six isozymic forms of human pepsinogens and pepsins. J. Biochem. 106 (1989) 920-927
4. Brinkmann H., Denk A., Zitzler J., Joss J.J., and Meyer A. Complete mitochondrial genome sequences of the South American and the Australian lungfish: testing of the phylogenetic performance of mitochondrial data sets for phylogenetic problems in tetrapod relationships. J. Mol. Evol. 59 (2004) 834-848
5. Davis B.J. Disc electrophoresis. II. Method and application to human serum proteins. Ann. N.Y. Acad. Sci. 121 (1964) 404-427
6. Dykes C.W., and Kay J. Conversion of pepsinogen into pepsin is not a one-step process. Biochem. J. 153 (1976) 141-144
7. Felsenstein, J. 2004. PHYLIP (Phylogeny Inference Package) version 3.6. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle (http://evolution.genetics.washington.edu/phylip.html).
8. Foltmann B. Gastric proteinases. Structure, function, evolution and mechanism of action. Essays Biochem. 17 (1981) 52-84
9. Foltmann B., and Szesci P.B. Pepsin B. In: Barrett A.J., Rawlings N.D., and Woessner J.F. (Eds). Handbook of Proteolytic Enzymes. 2nd ed. vol. 1 (2004), Academic Press, London 28-29
10. Foltmann B., and Szesci P.B. Chymosin. In: Barrett A.J., Rawlings D., and Woessner J.F. (Eds). Handbook of Proteolytic Enzymes. 2nd ed. vol. 1 (2004), Academic Press, London 29-32
11. Furihata C., Kawachi T., and Sugimura T. Premature induction of pepsinogen in developing rat gastric mucosa by hormones. Biochem. Biophys. Res. Commun. 47 (1972) 705-711
12. Guindon S., and Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52 (2003) 696-704
13. Hirasawa A., Athauda S.B.P., and Takahashi K. Purification and characterization of turtle pepsinogen and pepsin. J. Biochem. 120 (1996) 407-414
14. Inokuchi T., Kobayashi K., and Horiuchi. Isolation of pepsinogen A from gastric mucosa of bullfrog, Rana catesbeiana. Comp. Biochem. Physiol. B 111 (1995) 111-117
15. Ikuzawa M., Inokuchi T., Kobayashi K., and Yasumasu S. Amphibian pepsinogens: purification and characterization of Xenopus pepsinogens, and molecular cloning of Xenopus and bullfrog pepsinogens. J. Biochem. 129 (2001) 147-153
16. Jones D.T., Taylor W.R., and Thornton J.M. The rapid generation of mutation data matrices from protein sequences. Comput. Appl. Biosci. 8 (1992) 275-282
17. Kageyama T., and Takahashi K. Pepsinogens and pepsins from gastric mucosa of Japanese monkey. Purification and characterization. J. Biochem. 79 (1976) 455-468
18. 2-terminal 60 residues of the major pepsinogen. J. Biochem. 94 (1983) 1557-1567
19. 2-terminal amino acid sequences. Eur. J. Biochem. 141 (1984) 261-269
20. Kageyama T., Ichinose M., Tsukada S., Miki K., Kurokawa K., Koiwai O., Tanji M., Yakabe E., Athauda S.B.P., and Takahashi K. Gastric procathepsin E and progastricsin from guinea pig. Purification, molecular cloning of cDNAs, and characterization of enzymatic properties, with special reference to procathepsin E. J. Biol. Chem. 267 (1992) 16450-16459
21. Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227 (1970) 680-685
22. Nguyen A.D., Nungaray J., Martel A., Le Goffic F., Molle D., and Leonil J. Purification and characterization of the main pepsinogen from the shark, Centroscymnus coelolepsis. J. Biochem. 124 (1998) 287-293
23. Ornstein L. Disc electrophoresis. I. Background and theory. Ann. N.Y. Acad. Sci. 121 (1964) 321-349
24. Romer A.S. Vergleichende Anatomie der Wirbeltiere. 4th edn. (1976), Parey, Hamburg, Berlin 37-88
25. Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2001) 1572-1574
26. Suzuki M., Narita Y., Oda S., Moriyama A., Takenaka O., and Kageyama T. Comp. Biochem. Physiol. B 122 (1999) 453-460
27. Takezaki N., Figueroa F., Zaleska-Rutczynska Z., Takahata N., and Klein J. The phylogenetic relationship of tetrapod, coelacanth, and lungfish revealed by the sequences of forty-four nuclear genes. Mol. Biol. Evol. 21 (2004) 1512-1524
28. Tang J. Pepsin A. In: Barrett A.J., Rawlings N.D., and Woessner J.F. (Eds). Handbook of Proteolytic Enzymes. 2nd ed. vol. 1 (2004), Academic Press, London 19-28
29. Tang J. Gastricsin. In: Barrett A.J., Rawlings N.D., and Woessner J.F. (Eds). Handbook of Proteolytic Enzymes. 2nd ed. vol. 1 (2004), Academic Press, London 38-43
30. Tanji M., Kageyama T., and Takahashi K. Tuna pepsinogens and pepsins. Purification, characterization and amino-terminal sequences. Eur. J. Biochem. 177 (1988) 251-259
31. Tanji M., Yakabe E., Kageyama T., and Takahashi K. The primary structure of the major pepsinogen from the gastric mucosa of tuna stomach. J. Biochem. 120 (1996) 647-656
32. Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
33. Yakabe E., Tanji M., Ichinose M., Goto S., Miki K., Kurokawa K., Ito H., Kagayama T., and Takahashi K. Purification, characterization, and amino acid sequences of pepsinogens and pepsins from the esophageal mucosa of Bullfrog (Rana catesbeiana). J. Biol. Chem. 266 (1991) 22436-22443