The primary structure of the major pepsinogen from the gastric mucosa of tuna stomach

Journal of Biochemistry

Volumn 120, Issue 3, 1996, Pages 647-656

  Tanji, Masao ^a,e   Yakabe, Etsuko ^b,e   Kageyama, Takashi ^c   Takahashi, Kenji ^a,d  

^a UNIVERSITY OF TOKYO   (Japan)

^b AOYAMA GAKUIN UNIVERSITY   (Japan)

^c KYOTO UNIVERSITY   (Japan)

^d TOKYO UNIVERSITY OF PHARMACY AND LIFE SCIENCES   (Japan)

^e UNIVERSITY OF TEXAS   (United States)

Author keywords

Amino acid sequence; Pepsin; Pepsinogen; Phylogenetic tree; Tuna

Indexed keywords

PEPSINOGEN;

AMINO ACID SEQUENCE; ARTICLE; DISULFIDE BOND; ENZYME ACTIVE SITE; FISH; MOLECULAR WEIGHT; NONHUMAN; STOMACH MUCOSA;

SCOMBRIDAE GEN. SP.;

EID: 0029742212     PISSN: 0021924X     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.jbchem.a021461     Document Type: Article

References (54)

1. Foltmann, B. (1981) Gastric proteinases Structure, function, evolution and mechanism of action. Essays Biochem. 17, 52-84
2. Tang, J. and Wong, R.N.S. (1978) Evolution in the structure and function of aspartic proteases. J. Cell. Biochem. 33, 53-63
3. Tang, J., Sepulveda, P., Marciniszyn, J., Jr., Chen, K.C.S., Huang, W.-Y., Tao, N., Liu, D., and Lanier, J.P. (1973) Aminoacid sequence of porcine pepsin. Proc. Natl. Acad. Sci. USA 70, 3437-3439
4. Ong, E.B. and Perlmann, G.E. (1968) The amino-terminal sequence of porcine pepsinogen. J. Biol. Chem. 243, 6104-6109
5. Pederson, V.B. and Foltmann, B. (1973) The amino acid sequence of a hitherto unobserved segment from porcine pepsin preceding the N-terminus of pepsin. FEBS Lett. 35, 255-256
6. Stepanov, V.M., Baratova, L.A., Pugacheva, I.B., Belyanova, L.P., Revina, L.P., and Timokhina, E.A. (1973) N-terminal sequence of swine pepsinogen and pepsin. The site of pepsinogen activation. Biochem. Biophys. Res. Commun. 54, 1164-1170
7. Baudyš, M. and Kostka, V. (1983) Covalent structure of chicken pepsinogen. Eur. J. Biochem. 136, 89-99
8. Kageyama, T. and Takahashi, K. (1986) The complete amino acid sequence of monkey pepsinogen A. J. Biol. Chem. 261, 4395-4405
9. Kageyama, T. and Takahashi, K. (1986) The complete amino acid sequence of monkey progastricsin. J. Biol. Chem. 261, 4406-4419
10. Foltmann, B., Pedersen, V.B., Jacobsen, H., Kauffman, D., and Wybrandt, G. (1977) The complete amino acid sequence of prochymosin. Proc. Natl. Acad. Sci. USA 74, 2321-2324
11. Sogawa, K., Fujii-Kuriyama, Y., Mizukami, Y., Ichihara, Y., and Takahashi, K. (1983) Primary structure of human pepsinogen gene. J. Biol. Chem. 258, 5306-5311
12. Kageyama, T., Tanabe, K., and Koiwai, O. (1990) Structure and development of rabbit pepsinogens. J. Biol. Chem. 65, 17031-17038
13. Hayano, T., Sogawa, K., Ichihara, Y., Fujii-Kuriyama, Y., and Takahashi, K. (1988) Primary structure of human pepsinogen C gene. J. Biol. Chem. 263, 1382-1385
14. Taggert, R.T., Cass, L.G., Mohandas, T.K., Derby, P., Barr, P.J., Pals, G., and Bell, G.I. (1989) Human pepsinogen C (progastricsin). Isolation of cDNA clones, localization to chromosome 6, and sequence homology with pepsinogen A. J. Biol. Chem. 264, 375-379
15. Ichihara, Y., Sogawa, K., Morohashi, K., Fujii-Kuriyama, Y., and Takahashi, K. (1986) Nucleotide sequence of a nearly fulllength cDNA coding for pepsinogen of rat gastric mucosa. Eur. J. Biochem. 161, 7-12
16. Ishihara, T., Ichihara, Y., Hayano, T., Katsura, I., Sogawa, K., Fujii-Kuriyama, Y., and Takahashi, K. (1989) Primary structure and transcriptional regulation of rat pepsinogen C. J. Biol. Chem. 264, 10193-10199
17. Kageyama, T., Ichinose, M., Tsukada, S., Miki, K., Kurokawa, K., Koiwai, O., Tanji, M., Yakabe, E., Athauda, S.B.P., and Takahashi, K. (1992) Gastric procathepsin E and progastricsin from guinea pig. Purification, molecular cloning of cDNAs, and characterization of enzymatic properties, with special reference to procathepsin E. J. Biol. Chem. 267, 16450-16459
18. Yakabe, E., Tanji, M., Ichinose, M., Goto, S., Miki, K., Kurokawa, K., Ito, H., Kageyama, T., and Takahashi, K. (1991) Purification, characterization, and amino acid sequences of pepsinogens and pepsins from the esophageal mucosa of bullfrog (Rana catesbeiana). J. Biol. Chem. 266, 22436-22443
19. Hayashi, K., Agata, K., Mochii, M., Yasugi, S., Eguchi, G., and Mizuno, T. (1988) Molecular cloning and the nucleotide sequence of cDNA for embryonic chicken pepsinogen: Phylogenetic relationship with prochymosin. J. Biochem. 103, 290-296
20. Tanji, M., Kageyama, T., and Takahashi, K. (1988) Tuna pepsinogens and pepsins. Purification, characterization and amino-terminal sequences. Eur. J. Biochem. 177, 251-259
21. de Bernardo, S., Weigele, M., Toome, V., Manhart, K., Leimgruber, W., Böhln, P., Stein, S., and Udenfriend, S. (1974) Studies on the reaction of fluorescamine with primary amines. Arch. Biochem. Biophys. 163, 390-399
22. Crestfield, A.M., Moore, S., and Stein, W.H. (1963) The preparation and enzymatic hydrolysis of reduced and S-carboxymethylated proteins. J. Biol. Chem. 238, 622-627
23. Spackman, D.H., Stein, W.H., and Moore, S. (1958) Automatic recording apparatus for use in the chromatography of amino acids. Anal. Chem. 30, 1190-1206
24. van Eerd, J.-P. and Takahashi, K. (1976) Determination of the complete amino acid sequence of bovine cardiac troponin C. Biochemistry 15, 1171-1180
25. Edman, P. and Henschen, A. (1975) Sequence determination in Protein Sequence Determination (Needleman, S.B., ed.), 2nd ed., pp. 232-279, Springer-Verlag, New York
26. Tarr, G.E. (1975) A general procedure for the manual sequencing of small quantities of peptides. Anal. Biochem. 63, 361-370
27. Tsunasawa, S., Kondo, J., and Sakiyama, F. (1985) Isocratic separation of PTH-amino acids at picomole level by reverse-phase HPLC in the presence of sodium dodecylsulfate. J. Biochem. 97, 701-704
28. Faust, P.L., Kornfeld, S., and Chirgwin, J.M. (1985) Cloning and sequence analysis of cDNA for human cathepsin D. Proc. Natl. Acad. Sci. USA 82, 4910-4914
29. James, M.N.G. and Sielecki, A. (1986) Molecular structure of an aspartic proteinase zymogen, porcine pepsinogen, at 1.8 A resolution. Nature 319, 33-38
30. Sielecki, A.R., Fujinaga, M., Read, R.J., and James, M.N.G. (1991) Refined structure of porcine pepsinogen at 1.8 A resolution. J. Mol. Biol. 219, 671-692
31. Hartsuck, J.A., Koelsch, G., and Remington, S.J. (1992) The high resolution crystal structure of porcine pepsinogen. Proteins Struct. Funct. Genet. 13, 1-25
32. Sielecki, A.R., Fedorov, A.A., Boodhoo, A., Andreeva, N.S., and James, M.N.G. (1990) Molecular and crystal structures of monoclinic porcine pepsin refined at 1.8 Å resolution. J. Mol. Biol. 214, 143-170
33. Cooper, J.B., Khan, G., Taylor, G., Tickle, I.J., and Blundell, T.L. (1990) X-ray analyses of aspartic proteinases. II. Three-dimensional structure of the hexagonal crystal form of porcine pepsin at 2.3 Å resolution. J. Mol. Biol. 214, 199-222
34. Takahashi, K. and Kageyama, T. (1985) Multiplicity and intermediates of the activation mechanism of zymogens of gastric aspartic proteinases in Aspartic Proteinases and Their Inhibitors (Kostka, V., ed.) pp. 265-282, Walter de Gruyter, Berlin
35. Bustin, M. and Conway-Jacobs, A. (1971) Intramolecular activation of porcine pepsinogen. J. Biol. Chem. 246, 615-620
36. Al-Janabi, J., Hartsuck, J.A., and Tang, J. (1972) Kinetics and mechanism of pepsinogen activation. J. Biol. Chem. 247, 4628-4632
37. McPhie, P. (1974) Pepsinogen: Activation by a unimolecular mechanism. Biochem. Biophys. Res. Commun. 56, 789-792
38. Marciniszyn, J., Jr., Huang, J.S., Hartsuck, J.A., and Tang, J. (1976) Mechanism of intramolecular activation of pepsinogen. Evidence for an intermediate delta and the involvement of the active site of pepsin in the intramolecular activation of pepsinogen. J. Biol. Chem. 254, 7095-7102
39. Kageyama, T. and Takahashi, K. (1987) Activation mechanism of monkey and porcine pepsinogens A. Eur. J. Biochem. 165, 483-490
40. Bahak, Z. (1969) Purification and characterization of chicken pepsinogen and chicken pepsin. J. Biol. Chem. 244, 4638-4648
41. Foltmann, B. (1966) A review on prorennin and rennin. C.R. Trav. Lab. Carlsberg 35, 143-231
42. Kapoor, B.G., Smit, H., and Verighina, I.A. (1975) The alimentary canal and digestion in teleosts. Adv. Mar. Biol. 13, 109-239
43. Deren, J.S. (1971) Development of structure and function in the fetal and newborn stomach. Am. J. Clin. Nutr. 24, 144-159
44. Gildberg, A. (1988) Aspartic proteases in fishes and aquatic invertebrates. Comp. Biochem. Physiol. 91B, 425-435
45. Takahashi, T. and Tang, J. (1983) Amino acid sequence of porcine spleen cathepsin D light chain. J. Biol. Chem. 258, 6435-6443
46. Shewale, J.G. and Tang, J. (1984) Amino acid sequence of porcine spleen cathepsin D. Proc. Natl. Acad. Sci. USA 81, 3703-3707
47. Azuma, T., Pals, G., Mohandas, T.K., Couvreur, J.M., and Taggart, R.T. (1989) Human gastric cathepsin E. Predicted sequence, localization to chromosome 1, and sequence homology with other aspartic proteinases. J. Biol. Chem. 264, 16748-16753
48. Imai, T., Miyazaki, H., Hirose, S., Hori, H., Hayashi, T., Kageyama, R., Ohkubo, H., Nakanishi, S., and Murakami, K. (1983) Cloning and sequence analysis of cDNA for human renin precursor. Proc. Natl. Acad. Sci. USA 80, 7405-7409
49. Misono, K.S., Chang, J.-J., and Inagami, T. (1982) Amino acid sequence of mouse submaxillary gland renin. Proc. Natl. Acad. Sci. USA 79, 4858-4862
50. Panthier, J.-J., Foote, S., Chambraud, B., Strosberg, A.D., Corvol, P., and Rougeon, F. (1982) Complete amino acid sequence and maturation of the mouse submaxillary gland renin precursor. Nature 298, 90-92
51. Schechter, I. and Berger, A. (1967) On the size of the active site in proteases. I. Papain. Biochem. Biophys. Res. Commun. 27, 157-162
52. Schechter, I. and Berger, A. (1968) On the active site of proteases. 3. Mapping of the active site of papain; specific peptide inhibitors of papain. Biochem. Biophys. Res. Commun. 32, 898-902
53. Suzuki, J., Sasaki, K., Sasao, Y., Hamu, A., Kawasaki, H., Nishiyama, M., Horinouchi, S., and Beppu, T. (1989) Alteration of catalytic properties of chymosin by site-directed mutagenesis. Protein Eng. 2, 563-569
54. Fitch, W.M. and Margoliash, E. (1967) Construction of phylogenetic trees. Science 155, 279-284