메뉴 건너뛰기




Volumn 63, Issue 4, 2007, Pages 533-543

The influence of matrix attachment regions on transgene expression in Arabidopsis thaliana wild type and gene silencing mutants

Author keywords

Arabidopsis thaliana; Gene silencing mutants; High throughput screening; Matrix attachment regions; Nicotiana tabacum; Transgene expression

Indexed keywords

DNA; GENES; PLANTS (BOTANY);

EID: 33847186711     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-006-9107-x     Document Type: Article
Times cited : (20)

References (48)
  • 1
    • 0027617079 scopus 로고
    • Scaffold attachment regions increase reporter gene expression in stably transformed plant cells
    • Allen GC, Hall GE, Childs LC, Weissinger AK, Spiker S, Thompson WF (1993) Scaffold attachment regions increase reporter gene expression in stably transformed plant cells. Plant Cell 5:603-613
    • (1993) Plant Cell , vol.5 , pp. 603-613
    • Allen, G.C.1    Hall, G.E.2    Childs, L.C.3    Weissinger, A.K.4    Spiker, S.5    Thompson, W.F.6
  • 3
    • 0033832638 scopus 로고    scopus 로고
    • Use of matrix attachment regions (MARs) to minimize transgene silencing
    • Allen GC, Spiker S, Thompson WF (2000) Use of matrix attachment regions (MARs) to minimize transgene silencing. Plant Mol Biol 43:361-376
    • (2000) Plant Mol Biol , vol.43 , pp. 361-376
    • Allen, G.C.1    Spiker, S.2    Thompson, W.F.3
  • 5
    • 0036806428 scopus 로고    scopus 로고
    • Molecular and genetic analyses of transgenic plants: Considerations and approaches
    • Bhat SR, Srinivasan S (2002) Molecular and genetic analyses of transgenic plants: considerations and approaches. Plant Sci 164:673-681
    • (2002) Plant Sci , vol.164 , pp. 673-681
    • Bhat, S.R.1    Srinivasan, S.2
  • 6
    • 0028429947 scopus 로고
    • The role of scaffold attachment regions in the structural and functional organization of plant chromatin
    • Breyne P, Van Montagu M, Gheysen G (1994) The role of scaffold attachment regions in the structural and functional organization of plant chromatin. Transgenic Res 3:195-202
    • (1994) Transgenic Res , vol.3 , pp. 195-202
    • Breyne, P.1    Van Montagu, M.2    Gheysen, G.3
  • 9
    • 0032447801 scopus 로고    scopus 로고
    • Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
    • Clough SJ, Bent AF (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16:735-743
    • (1998) Plant J , vol.16 , pp. 735-743
    • Clough, S.J.1    Bent, A.F.2
  • 10
    • 0023046959 scopus 로고
    • Chromosomal loop anchorage sites appear to be evolutionarily conserved
    • Cockerill PN, Garrard WT (1986) Chromosomal loop anchorage sites appear to be evolutionarily conserved. FEBS Lett 204:5-7
    • (1986) FEBS Lett , vol.204 , pp. 5-7
    • Cockerill, P.N.1    Garrard, W.T.2
  • 11
    • 0034669170 scopus 로고    scopus 로고
    • Transgene integration into the same chromosome location can produce alleles that express at a predictable level, or alleles that are differentially silenced
    • Day CD, Lee E, Kobayashi J, Holappa LD, Albert H, Ow DW (2000) Transgene integration into the same chromosome location can produce alleles that express at a predictable level, or alleles that are differentially silenced. Genes Dev 14:2869-2880
    • (2000) Genes Dev , vol.14 , pp. 2869-2880
    • Day, C.D.1    Lee, E.2    Kobayashi, J.3    Holappa, L.D.4    Albert, H.5    Ow, D.W.6
  • 13
    • 0038758047 scopus 로고    scopus 로고
    • Analysis of the influence of promoter elements and a matrix attachment region on the inter-individual variation of transgene expression in populations of Arabidopsis thaliana
    • De Bolle MFC, Butaye KMJ, Coucke WJW, Goderis IJWM, Wouters PFJ, van Boxel N, Broekaert WF, Cammue BPA (2003) Analysis of the influence of promoter elements and a matrix attachment region on the inter-individual variation of transgene expression in populations of Arabidopsis thaliana. Plant Sci 165:169-179
    • (2003) Plant Sci , vol.165 , pp. 169-179
    • De Bolle, M.F.C.1    Butaye, K.M.J.2    Coucke, W.J.W.3    Goderis, I.J.W.M.4    Wouters, P.F.J.5    van Boxel, N.6    Broekaert, W.F.7    Cammue, B.P.A.8
  • 14
    • 9744254784 scopus 로고    scopus 로고
    • Singlecopy T-DNAs integrated at different positions in the Arabidopsis genome display uniform and comparable β-glucuronidase accumulation levels
    • De Buck S, Windels P, De Loose M, Depicker A (2004) Singlecopy T-DNAs integrated at different positions in the Arabidopsis genome display uniform and comparable β-glucuronidase accumulation levels. Cell Mol Life Sci 61:2632-2645
    • (2004) Cell Mol Life Sci , vol.61 , pp. 2632-2645
    • De Buck, S.1    Windels, P.2    De Loose, M.3    Depicker, A.4
  • 16
    • 0028145804 scopus 로고
    • A plant scaffold attached region detected close to a T-DNA integration site is active in mammalian cells
    • Dietz A, Kay V, Schlake T, Landsman J, Bode J (1994) A plant scaffold attached region detected close to a T-DNA integration site is active in mammalian cells. Nucleic Acid Res 22:2744-2751
    • (1994) Nucleic Acid Res , vol.22 , pp. 2744-2751
    • Dietz, A.1    Kay, V.2    Schlake, T.3    Landsman, J.4    Bode, J.5
  • 17
    • 0036180490 scopus 로고    scopus 로고
    • In silico prediction of scaffold/matrix attachment regions in large genomic sequences
    • Frisch M, Frech K, Klingenhoff A, Cartharius K, Liebich I, Werner T (2002) In silico prediction of scaffold/matrix attachment regions in large genomic sequences. Genome Res 12:349-354
    • (2002) Genome Res , vol.12 , pp. 349-354
    • Frisch, M.1    Frech, K.2    Klingenhoff, A.3    Cartharius, K.4    Liebich, I.5    Werner, T.6
  • 18
    • 0035984357 scopus 로고    scopus 로고
    • A set of modular plant transformation vectors allowing flexible insertion of up to six expression units
    • Goderis I, De Bolle M, François I, Broekaert W, Cammue B (2002) A set of modular plant transformation vectors allowing flexible insertion of up to six expression units. Plant Mol Biol 50:17-27
    • (2002) Plant Mol Biol , vol.50 , pp. 17-27
    • Goderis, I.1    De Bolle, M.2    François, I.3    Broekaert, W.4    Cammue, B.5
  • 20
    • 24744453429 scopus 로고    scopus 로고
    • The Rb7 matrix attachment region increases the likelihood and magnitude of transgene expression in tobacco cells: A flow cytometric study
    • Halweg C, Thompson WF, Spiker S (2005) The Rb7 matrix attachment region increases the likelihood and magnitude of transgene expression in tobacco cells: a flow cytometric study. Plant Cell 17:418-429
    • (2005) Plant Cell , vol.17 , pp. 418-429
    • Halweg, C.1    Thompson, W.F.2    Spiker, S.3
  • 21
    • 0027345841 scopus 로고
    • Transgene copy number can be positively or negatively associated with transgene expression
    • Hobbs SLA, Warketin TD, DeLong CMO (1993) Transgene copy number can be positively or negatively associated with transgene expression. Plant Mol Biol 21:17-26
    • (1993) Plant Mol Biol , vol.21 , pp. 17-26
    • Hobbs, S.L.A.1    Warketin, T.D.2    DeLong, C.M.O.3
  • 22
    • 0032031347 scopus 로고    scopus 로고
    • Nuclear matrix attachment regions and plant gene expression
    • Holmes-Davis R, Comai L (1998) Nuclear matrix attachment regions and plant gene expression. Trends Plant Sci 3:91-97
    • (1998) Trends Plant Sci , vol.3 , pp. 91-97
    • Holmes-Davis, R.1    Comai, L.2
  • 24
    • 0001200134 scopus 로고
    • The promoter of TL-DNA gene 5 controls the tissue-specific expression of chimaeric genes carried by a novel gene type of Agrobacterium binary vector
    • Koncz C, Shell J (1986) The promoter of TL-DNA gene 5 controls the tissue-specific expression of chimaeric genes carried by a novel gene type of Agrobacterium binary vector. Mol Gen Genet 204:383-396
    • (1986) Mol Gen Genet , vol.204 , pp. 383-396
    • Koncz, C.1    Shell, J.2
  • 25
    • 0031929528 scopus 로고    scopus 로고
    • The influences of two plant matrix attachment regions (MARs) on gene expression in transgenic plants
    • Liu JW, Tabe LM (1998) The influences of two plant matrix attachment regions (MARs) on gene expression in transgenic plants. Plant Cell Physiol 39:115-123
    • (1998) Plant Cell Physiol , vol.39 , pp. 115-123
    • Liu, J.W.1    Tabe, L.M.2
  • 26
    • 4644265935 scopus 로고    scopus 로고
    • Gene transfer and expression in plants
    • Lorence A, Verpoorte R (2004) Gene transfer and expression in plants. Methods Mol Biol 267:329-350
    • (2004) Methods Mol Biol , vol.267 , pp. 329-350
    • Lorence, A.1    Verpoorte, R.2
  • 27
    • 0038736884 scopus 로고    scopus 로고
    • Elevation of transgene expression level by flanking matrix attachment regions (MAR) is promoter dependent: A study of the interactions of six promoters with the RB7 3' MAR
    • Mankin SL, Allen GC, Phelan T, Spiker S, Thompson WF (2003) Elevation of transgene expression level by flanking matrix attachment regions (MAR) is promoter dependent: a study of the interactions of six promoters with the RB7 3' MAR. Transgenic Res 12:3-12
    • (2003) Transgenic Res , vol.12 , pp. 3-12
    • Mankin, S.L.1    Allen, G.C.2    Phelan, T.3    Spiker, S.4    Thompson, W.F.5
  • 28
    • 0025181252 scopus 로고
    • Hierarchical binding of DNA fragments derived from scaffold-attached regions: Correlation of properties in vitro and function in vivo
    • Mielke C, Kohwi Y, Kohwi-Shigematsu T, Bode J (1990) Hierarchical binding of DNA fragments derived from scaffold-attached regions: correlation of properties in vitro and function in vivo. Biochemistry 29:7475-7485
    • (1990) Biochemistry , vol.29 , pp. 7475-7485
    • Mielke, C.1    Kohwi, Y.2    Kohwi-Shigematsu, T.3    Bode, J.4
  • 29
    • 0021675784 scopus 로고
    • Organization of the higher-order chromatin loop: Specific DNA attachment sites on nuclear scaffold
    • Mirkovitch J, Mirault ME, Laemmli UK (1984) Organization of the higher-order chromatin loop: specific DNA attachment sites on nuclear scaffold. Cell 39:223-232
    • (1984) Cell , vol.39 , pp. 223-232
    • Mirkovitch, J.1    Mirault, M.E.2    Laemmli, U.K.3
  • 30
    • 0028038531 scopus 로고
    • Reduced position effect in mature transgenic plants conferred by the chicken lysozyme matrix-associated region
    • Mlynárová L, Loonen A, Heldens J, Jansen R.C., Keizer P, Stiekema WJ, Nap JP (1994) Reduced position effect in mature transgenic plants conferred by the chicken lysozyme matrix-associated region. Plant Cell 6:417-426
    • (1994) Plant Cell , vol.6 , pp. 417-426
    • Mlynárová, L.1    Loonen, A.2    Heldens, J.3    Jansen, R.C.4    Keizer, P.5    Stiekema, W.J.6    Nap, J.P.7
  • 31
    • 0028795156 scopus 로고
    • The MAR-mediated reduction in position effect can be uncoupled from copy number-dependent expression in transgenic plants
    • Mlynárová L, Jansen RC, Conner AJ, Stiekema WJ, Nap JP (1995) The MAR-mediated reduction in position effect can be uncoupled from copy number-dependent expression in transgenic plants. Plant Cell 7:599-609
    • (1995) Plant Cell , vol.7 , pp. 599-609
    • Mlynárová, L.1    Jansen, R.C.2    Conner, A.J.3    Stiekema, W.J.4    Nap, J.P.5
  • 32
    • 0141453012 scopus 로고    scopus 로고
    • The presence of a chromatin boundary appears to shield a transgene in tobacco from RNA silencing
    • Mlynárová L, Hricova A, Loonen A, Nap JP (2003) The presence of a chromatin boundary appears to shield a transgene in tobacco from RNA silencing. Plant Cell 15:2203-2217
    • (2003) Plant Cell , vol.15 , pp. 2203-2217
    • Mlynárová, L.1    Hricova, A.2    Loonen, A.3    Nap, J.P.4
  • 34
    • 51249169564 scopus 로고
    • First-generation transgenic plants and statistics
    • Nap J-P, Keizer P, Jansen R (1993) First-generation transgenic plants and statistics. Plant Mol Biol Rep 11:156-164
    • (1993) Plant Mol Biol Rep , vol.11 , pp. 156-164
    • Nap, J.-P.1    Keizer, P.2    Jansen, R.3
  • 35
    • 21144447362 scopus 로고    scopus 로고
    • Matrix attachment region from the chicken lysozyme locus reduces variability in transgene expression and confers copy number-dependence in transgenic rice plants
    • Oh S-J, Jeong JS, Kim E-H, Yi NR, Yi S-I, Jang I-C, Kim YS, Suh S-C, Nahm BH, Kim J-K (2005) Matrix attachment region from the chicken lysozyme locus reduces variability in transgene expression and confers copy number-dependence in transgenic rice plants. Plant Cell Rep 24:145-154
    • (2005) Plant Cell Rep , vol.24 , pp. 145-154
    • Oh, S.-J.1    Jeong, J.S.2    Kim, E.-H.3    Yi, N.R.4    Yi, S.-I.5    Jang, I.-C.6    Kim, Y.S.7    Suh, S.-C.8    Nahm, B.H.9    Kim, J.-K.10
  • 36
    • 0036007695 scopus 로고    scopus 로고
    • Ow DW (2002) Recombinase-directed plant transformation for the post-genomic era. Plant Mol Biol 48:183-200
    • Ow DW (2002) Recombinase-directed plant transformation for the post-genomic era. Plant Mol Biol 48:183-200
  • 37
    • 0036010845 scopus 로고    scopus 로고
    • Matrix attachment regions (MARs) enhance transformation frequencies and reduce variance of transgene expression in barley
    • Petersen K, Leah R, Knudsen S, Cameron-Mills V (2002) Matrix attachment regions (MARs) enhance transformation frequencies and reduce variance of transgene expression in barley. Plant Mol Biol 49:45-58
    • (2002) Plant Mol Biol , vol.49 , pp. 45-58
    • Petersen, K.1    Leah, R.2    Knudsen, S.3    Cameron-Mills, V.4
  • 38
    • 0023969306 scopus 로고
    • The matrix attachment regions of the chicken lysozyme gene co-map with the boundaries of the chromatin domain
    • Phi-Van L, Strätling WH (1988) The matrix attachment regions of the chicken lysozyme gene co-map with the boundaries of the chromatin domain. Embo J 7:655-664
    • (1988) Embo J , vol.7 , pp. 655-664
    • Phi-Van, L.1    Strätling, W.H.2
  • 39
    • 0025272208 scopus 로고
    • The chicken lysozyme 5' matrix attachment region increases transcription from a heterologous promoter in heterologous cells and dampens position effects on the expression of transfected genes
    • Phi-Van L, von Kries JP, Ostertag W, Strätling WH (1990) The chicken lysozyme 5' matrix attachment region increases transcription from a heterologous promoter in heterologous cells and dampens position effects on the expression of transfected genes. Mol Cell Biol 10:2302-2307
    • (1990) Mol Cell Biol , vol.10 , pp. 2302-2307
    • Phi-Van, L.1    von Kries, J.P.2    Ostertag, W.3    Strätling, W.H.4
  • 40
    • 0027564737 scopus 로고
    • An SAR sequence containing 395 bp DNA fragment mediates enhanced, gene-dosage- correlated expression of chimaeric heat shock gene in transgenic tobacco plants
    • Schöffl F, Schröder G, Kliem M, Rieping M (1993) An SAR sequence containing 395 bp DNA fragment mediates enhanced, gene-dosage- correlated expression of chimaeric heat shock gene in transgenic tobacco plants. Transgenic Res 2:93-100
    • (1993) Transgenic Res , vol.2 , pp. 93-100
    • Schöffl, F.1    Schröder, G.2    Kliem, M.3    Rieping, M.4
  • 42
    • 0030741634 scopus 로고    scopus 로고
    • Mathematical model to predict regions of chromatin attachment to the nuclear matrix
    • Singh GB, Kramer JA, Krawetz SA (1997) Mathematical model to predict regions of chromatin attachment to the nuclear matrix. Nucleic Acids Res 25:1419-1425
    • (1997) Nucleic Acids Res , vol.25 , pp. 1419-1425
    • Singh, G.B.1    Kramer, J.A.2    Krawetz, S.A.3
  • 43
    • 8144223390 scopus 로고    scopus 로고
    • Cre-mediated site-specific gene integration for consistent transgene expression in rice
    • Srivastava V, Ariza-Nieto M, Wilson A (2004) Cre-mediated site-specific gene integration for consistent transgene expression in rice. Plant Biotechnol J 2:169-179
    • (2004) Plant Biotechnol J , vol.2 , pp. 169-179
    • Srivastava, V.1    Ariza-Nieto, M.2    Wilson, A.3
  • 44
    • 0033041546 scopus 로고    scopus 로고
    • A tobacco matrix attachment region reduces the loss of transgene expression in the progeny of transgenic tobacco plants
    • Ülker B, Allen GC, Thompson WF, Spiker S, Weissinger AK (1999) A tobacco matrix attachment region reduces the loss of transgene expression in the progeny of transgenic tobacco plants. Plant J 18:253-263
    • (1999) Plant J , vol.18 , pp. 253-263
    • Ülker, B.1    Allen, G.C.2    Thompson, W.F.3    Spiker, S.4    Weissinger, A.K.5
  • 45
    • 0033036978 scopus 로고    scopus 로고
    • Matrix attachment regions increase transgene expression levels and stability in transgenic rice plants and their progeny
    • Vain P, Worland B, Kohli A, Snape W, Christou P, Allen GC, Thompson WF (1999) Matrix attachment regions increase transgene expression levels and stability in transgenic rice plants and their progeny. Plant J 18:233-242
    • (1999) Plant J , vol.18 , pp. 233-242
    • Vain, P.1    Worland, B.2    Kohli, A.3    Snape, W.4    Christou, P.5    Allen, G.C.6    Thompson, W.F.7
  • 46
    • 85115107592 scopus 로고
    • Agrobacterium tumefaciens-mediated transformation of Arabidopsis root explants using kanamycin selection
    • Valvekens D, Van Montagu M, Van Lijsebettens M (1988) Agrobacterium tumefaciens-mediated transformation of Arabidopsis root explants using kanamycin selection. Proc Natl Acad Sci USA 85:5536-5540
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 5536-5540
    • Valvekens, D.1    Van Montagu, M.2    Van Lijsebettens, M.3
  • 48
    • 15244356589 scopus 로고    scopus 로고
    • TM2, a novel strong matrix attachment region isolated from tobacco, increases transgene expression in transgenic rice calli and plants
    • Xue H, Yang Y-T, Wu C-A, Yang G-D, Zhang M-M, Zheng C-C (2005) TM2, a novel strong matrix attachment region isolated from tobacco, increases transgene expression in transgenic rice calli and plants. Theor Appl Genet 110:620-627
    • (2005) Theor Appl Genet , vol.110 , pp. 620-627
    • Xue, H.1    Yang, Y.-T.2    Wu, C.-A.3    Yang, G.-D.4    Zhang, M.-M.5    Zheng, C.-C.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.