Genetic variation among trout in the River Neretva basin, Bosnia and Herzegovina

Journal of Fish Biology

Volumn 70, Issue SUPPL. A, 2007, Pages 94-110

  Razpet, A ^a   Susnik S ^a   Jug, T ^a   Snoj, A ^a  

^a UNIVERSITY OF LJUBLJANA   (Slovenia)

Author keywords

Adriatic drainage; Brown trout; Hybrids; Introgression; Marble trout; Softmouth trout

Indexed keywords

SALMO; SALMO MARMORATUS; SALMO OBTUSIROSTRIS; SALMO TRUTTA; SALMONIDAE;

EID: 33847060874     PISSN: 00221112     EISSN: 10958649     Source Type: Journal    
DOI: 10.1111/j.1095-8649.2007.01392.x     Document Type: Article

References (53)

1. Apostolidis, A. P., Triantaphyllidis, C., Kouvatsi, A. & Economidis, P. (1997). Mitochondrial DNA sequence variation and phylogeography among Salmo trutta L. (Greek brown trout) populations. Molecular Ecology 6, 531-542.
2. Bǎnǎrescu, P. M. (2004). Distribution pattern of the aquatic fauna of the Balkan peninsula. In Balkan Biodiversity. Pattern and Process in the European Hotspot (Griffiths, H. I., Kryštufek, B. & Reed, J. M., eds), pp. 203-217. Dordrecht: Kluwer Academic Publishers.
3. Belkhir, K., Borsa, P., Chikhi, L., Raufaste, N. & Bonhomme, F. (1996-2004). GENETIX 4.04, logiciel sous Windows TM pour la géné tique des populations. Laboratoire Génome, Populations, Interactions, CNRS UMR 5000, Université de Montpellier II, Montpellier (France).
4. Bernatchez, L. (2001). The evolutionary history of brown trout (Salmo trutta L.) inferred from phylogeographic, nested clade, and mismatch analyses of mitochondrial DNA variation. Evolution 55, 351-379.
5. Bernatchez, L. & Danzmann, R. G. (1993). Congruence in control-region sequence and restriction-site variation in mitochondrial DNA of brook char (Salvelinus fontinalis Mitchill). Molecular Biology and Evolution 10, 1002-1014.
6. Berrebi, P., Povž , M., Jesenšek, D., Cattaneo-Berrebi, G. & Crivelli, A. J. (2000). The genetic diversity of native, stocked and hybrid populations of marble trout in the Soča River, Slovenia. Heredity 85, 277-287.
7. Bianco, P. G. (1990). Potential role of the palaeohistory of the Mediterranean and Paratethys basins on the early dispersal of Euro-Mediterranean freshwater fishes. Ichthyological Exploration of Freshwaters 1, 167-184.
8. Clement, M., Posada, D. & Crandall, K. A. (2000). TCS, a computer program to estimate gene genealogies. Molecular Ecology 9, 1657.
9. Cortey, M., Pla, C. & Garcǐa-Marǐn, J. L. (2004). Historical biogeography of Mediterranean trout. Molecular Phylogenetics and Evolution 33, 831-844.
10. Delling, B. (2000). Morphological distinction of the marble trout, Salmo marmoratus, in comparison to marbled Salmo trutta from river Otra, Norway. Cybium 26, 283-300.
11. Delling, B. (2003). Species diversity and phylogeny of Salmo with emphasis on southern trouts (Teleostei, Salmonidae). PhD Thesis, University of Stockholm, Stockholm.
12. Durand, J. D., Persat, H. & Bouvet, Y. (1999). Phylogeography and postglacial dispersion of the chub (Leuciscus cephalus) in Europe. Molecular Evolution 8, 989-997.
13. Evanno, G., Regnaut, S. & Goudet, J. (2005). Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology 14, 2611-2620.
14. Falush, D., Stephens, M. & Pritchard, J. K. (2003). Inference of population structure using multilocus genotype data, linked loci and correlated allele frequencies. Genetics 164, 1567-1587.
15. Garcia-Marin, J. L., Utter, F. M. & Carles, P. (1999). Postglacial colonization of brown trout in Europe based on distribution of allozyme variants. Heredity 82, 46-56.
16. Heckel, J. (1852). Beiträge zu den Gattungen Salmo, Fario, Salar, Coregonus, Chondrostoma und Telestes. Sitz-Ber Akad Wiss Wien, Math-Natwiss Cl 8, 347-391.
17. Hewitt, G. M. (1996). Some genetic consequences of ice ages, and their role in divergence and speciation. Biological Journal of the Linnaean Society 58, 247-276.
18. Hewitt, G. M. (1999). Post-glacial re-colonization of European biota. Biological Journal of the Linnaean Society 68, 87-112.
19. Jug, T., Berrebi, P. & Snoj, A. (2005). Distribution of non-native trout in Slovenia and their introgression with native trout populations as observed through microsatellite DNA analysis. Biological Conservation 123, 381-388.
20. Karaman, S. (1926). Salmonidi Balkana. Bulletein de la Societé Scientifique de Skoplje 2, 253-268.
21. Karaman, S. (1937). Beitrag zur Kenntnis der Suesswasserfische Jugoslaviens. Bulletein de la Societé Scientifique de Skoplje 6, 131-139.
22. Kosorić, D. & Vuković, T. (1969). Ispitivanja mogučnosti hibridizacije salmonidnih vrsta sliva Neretva. Ichthyologia 1, 57-67.
23. Kosorić, D., Kapetanović, N., Guzina, N. & Mikavica, D. (1983). Sastav naselja riba rijeke Neretve u Bosni I Hercegovini. Godišnjak Biološkog instituta Univerziteta u Sarajevu 36, 117-128.
24. Kotlik, P. & Berrebi, P. (2001). Phylogeography of the barbel (Barbus barbus) assessed by mitochondrial DNA variation. Molecular Ecology 20, 2177-2185.
25. Kottelat, M. (1997). European freshwater fishes. Biologia 52 (Suppl. 5), 1-271.
26. Marić, S., Sušnik, S., Simonović, P. & Snoj, A. (2006). Phylogeographic study of brown trout from Serbia, based on mitochondrial DNA control region analysis. Genetics Selection Evolution 38, 411-430.
27. McMeel, O. M., Hoey, E. M. & Ferguson, A. (2001). Partial nucleotide sequences, and routine typing by polymerase chain reaction-restriction fragment length polymorphism, of the brown trout (Salmo trutta) lactate dehydrogenase, LDHC1* 90 and *100 alleles. Molecular Ecology 10, 29-34.
28. O'Reilly, P. T., Hamilton, L. C., McConnell, S. K. & Wright, J. M. (1996). Rapid analysis of genetic variation in Atlantic salmon (Salmo salar) by PCR multiplexing of dinucleotide and tetranucleotide microsatellites. Canadian Journal of Fisheries and Aquatic Sciences 53, 2292-2298.
29. Oakley, T. H. & Phillips, R. B. (1999). Phylogeny of Salmoninae fishes based on growth hormone introns, Atlantic (Salmo) and Pacific (Oncorhynchus) salmon are not sister taxa. Molecular Phylogenetics and Evolution 11, 381-393.
30. Phillips, R. B., Matsuoka, M. P., Konkol, N. R. & McKay, S. (2004). Molecular systematics and evolution of the growth hormone introns in the Salmoninae. Environmental Biology of Fishes 69, 433-440.
31. Poteaux, C. (1995). Interactions genetiques entre formes sauvages et formes domestiques chez la truite commune (Salmo trutta fario L.). PhD Thesis, University of Montpellier II, France.
32. Povž, M., Jesenšek, D., Berrebi, P. & Crivelli, A. J. (1996). The Marble Trout, Salmo trutta marmoratus, Cuvier 1817 in the Soča River Basin, Slovenia, pp. 171. Arles: Station de biologique de la Tour du Valat publication.
33. Pritchard, J. K., Stephens, M. & Donnelly, P. (2000). Inference of population structure using multilocus genotype data. Genetics 155, 945-959.
34. Rieseberg, L. H., Archer, M. A. & Wayne, R. K. (1999). Transgressive segregation, adaptation and speciation. Heredity 83, 363-372.
35. Scribner, K. T., Page, K. S. & Bartron, M. L. (2001). Hybridization in freshwater fishes: a review of case studies and cytonuclear methods of biological inference. Reviews in Fish Biology and Fisheries 10, 293-323.
36. Seehausen, O. (2004). Hybridization and adaptive radiation. Trends in Ecology & Evolution 19, 198-207.
37. Skaala, Ø. & Solberg, G. (1997). Biochemical genetic variability and taxonomy of a marmorated salmonid in River Otra, Norway. Nordic Journal of Freshwater Research 73, 3-12.
38. Snoj, A. (2004). Filogeografska struktura postrvi (Salmo trutta L.) v Sloveniji. Ribič 10, 239-243.
39. Snoj, A., Jug, T., Melkič, E., Sušnik, S., Pohar, J., Dovč , P., Jesenšek, D. & Budihna, N. (2000). Mitochondrial and microsatellite DNA analysis of marble trout in Slovenia. Quaderni ETP 29, 5-11.
40. Snoj, A., Melkič, E., Sušnik, S., Muhamedagič, S. & Dovč, P. (2002). DNA phylogeny supports revised classification of Salmothymus obtusirostris. Biological Journal of the Linnaean Society 77, 399-411.
41. Suarez, J., Bautista, J. M., Almodovar, A. & Machordom, A. (2001). Evolution of the mitochondrial control region in Palearctic brown trout (Salmo trutta) populations, the biogeographical role of the Iberian Peninsula. Heredity 87, 198-206.
42. Sušnik, S., Snoj, A., Pohar, J. & Dovč, P. (1997). The microsatellite marker (BFRO 002) characteristic for different geographically remote brown trout, Salmo trutta L., populations. Animal Genetics 28, 372.
43. Sušnik, S., Berrebi, P., Dovč, P., Hansen, M. M. & Snoj, A. (2004). Genetic introgression between wild and stocked salmonids and the prospects for using molecular markers in population rehabilitation, the case of the Adriatic grayling (Thymallus thymallus L. 1785). Heredity 93, 273-282.
44. Sušnik, S., Schöffmann, J. & Weiss, S. (2005). Genetic verification of native brown trout from the Persian Gulf (Catak Cay River, Tigris basin). Journal of Fish Biology 67, 879-884.
45. Sušnik, S., Snoj, A., Wilson, I. F., Mrdak, D. & Weiss, S. (2007a). Historical demography of brown trout (Salmo trutta) in the Adriatic drainage including the putative S. letnica endemic to Lake Ohrid. Molecular Phylogenetics and Evolution. doi: 10.1016/j.ympev.2006. 08.021
46. Sušnik, S., Weiss, S., Odak, T., Delling, B., Treer, T. & Snoj, A. (2007b). Reticulate Evolution: ancient introgression of the Adriatic brown trout mtDNA in softmouth trout Salmo obtusirostris (Teleostei: Salmonidae). Biological Journal of the Linnean Society 90, 139-152.
47. Taberlet, P., Fumagalli, L., Wust-Saucy, A.-G. & Cosson, J.-F. (1998). Comparative phylogeography and postglacial colonization routes in Europe. Molecular Ecology 7, 453-464.
48. Takezaki, N. & Nei, M. (1996) Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA. Genetics 144, 189-399.
49. Templeton, A. R., Crandall, K. A. & Sing, C. F. (1992). A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics 132, 619-633.
50. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface, flexible strategies for multiple sequence alignment aided by quality analysis tool. Nucleic Acids Research 25, 4876-4882.
51. Vuković, T. (1982). Sistematika riba. In Slatkovodno ribarstvo (Habeković, D., ed.), pp. 99-168. Zagreb: Jugoslavenska medicinska naklada.
52. Weir, B. S. & Cockerham, C. C. (1984). Estimating F-statistics for the analysis of population structure. Evolution 38, 1358-1370. Electronic Reference
53. Langella, O. (2002). Populations 1.2.28. Logiciel de géné tique des populations. Laboratoire Populations, génétique et évolution, CNRS UPR 9034, Gif-sur-Yvette. http://wwwcnrs-gif.fr/pge/