Cloning and characterization of cytochrome c oxidase subunit I (COXI) in Gobiocypris rarus

DNA Sequence - Journal of DNA Sequencing and Mapping

Volumn 18, Issue 1, 2007, Pages 1-8

  Pei, De Sheng ^a   Sun, Yong Hua ^a   Chen, Shang Ping ^a   Wang, Ya Ping ^a   Zhu, Zuo Yan ^a  

^a INSTITUTE OF HYDROBIOLOGY   (China)

Author keywords

Cytochrome c Oxidase Subunit I; Danio rerio; Gobiocypris rarus; RNA editing

Indexed keywords

COMPLEMENTARY DNA; CYTOCHROME C OXIDASE; CYTOCHROME C OXIDASE SUBUNIT I; DNA; TRANSFER RNA; UNCLASSIFIED DRUG;

3' UNTRANSLATED REGION; AMINO ACID SEQUENCE; ANIMAL EMBRYO; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; EGG; EMBRYO; FISH; GENE EXPRESSION PROFILING; GENETIC ANALYSIS; GOBIOCYPRIS RARUS; ISOENZYME ANALYSIS; MOLECULAR CLONING; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; PROTEIN EXPRESSION; RNA EDITING; ZEBRA FISH;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CLONING, MOLECULAR; DNA, COMPLEMENTARY; ELECTRON TRANSPORT COMPLEX IV; FISHES; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; PHYLOGENY; RNA EDITING; RNA, TRANSFER, SER; SEQUENCE HOMOLOGY, AMINO ACID;

DANIO RERIO; GOBIOCYPRIS RARUS; GOBIONINAE;

EID: 33847048700     PISSN: 10425179     EISSN: 10292365     Source Type: Journal    
DOI: 10.1080/10425170600699752     Document Type: Article

References (23)

1. Bhalla T, Rosenthal JJ, Holmgren M, Reenan R. 2004. Control of human potassium channel inactivation by editing of a small mRNA hairpin. Nature Struct Mol Biol 11(10):950-956.
2. Brian K, Christine AD. 2003. Zebrafish as an experimental model: Strategies for developmental and molecular neurobiology studies. Methods Cell Sci 25(1-2):1-6.
3. Chen YY. 1998. Danioninae. In: Chen YY, editor. Fauna sinicateleostome class Cypriniformes II. Bei Jing: Science Press. p 19-50.
4. Covello PS, Gray MW. 1993. On the evolution of RNA editing. Trends Genet 9:256-268.
5. Felsenstein J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791.
6. Gasse RB, Zhu X, McManus DP. 1999. NADH dehydrogenase subunit 1 and cytochrome c oxidase subunit I sequences compared for members of the genus Taenia (Cestoda). Int J Parasitol 29(12):1965-1970.
7. Gray MW. 1989. Origin and evolution of mitochondrial DNA. Annu Rev Cell Biol 5:25-50.
8. Grunwald DJ, Eisen JS. 2002. Headwaters of the zebrafish - emergence of a new model vertebrate. Nat Rev Genet 3(9):717-724.
9. He S, Liu H, Chen Y, Kuwahara M, Nakajima T, Zhong Y. 2004. Molecular phylogenetic relationships of Eastern Asian Cyprinidae (pisces: Cypriniformes) inferred from cytochrome b sequences. Sci China C Life Sci 47(2):130-138.
10. Hedges SB. 1992. The number of replications needed for accurate estimation of the bootstrap P value in phylogenetic studies. Mol Biol Evol 9(2):366-369.
11. Hoopengardner B, Bhalla T, Staber C, Reenan R. 2003. Nervous system targets of RNA editing identified by comparative genomics. Science 301:832-836.
12. Kimmel CB, Ballard WW, Kimmel SR, Ullmann B, Schilling TF. 1995. Stages of embryonic development of the zebrafish. Dev Dyn 203(3):253-310.
13. Lu Mengzhu, Szmidt_A E, Wang Xiaoru. 1998. RNA editing in gymnosperms and its impact on the evolution of the mitochondrial coxI gene. Plant Mol Biol 37(2):225-234.
14. Qun-Fang Z, Gui-Bin J, Ji-Yan L. 2002. Effects of sublethal levels of Tributyltin Chloride in a new toxicity test organism: The Chinese rare minnow (Gobiocypris rarus). Arch Environ Contam Toxicol 42(3):332-337.
15. Seeburg P, Hartner J. 2003. Regulation of ion channel/neurotransmitter receptor function by RNA editing. Curr Opin Neurobiol 13(3):279-283.
16. Sparks JS. 2004. A clade of non-sexually dimorphic Ponyfishes (teleostei: Perciformes: Leiognathidae): Phylogeny, taxonomy, and description. Am Mus Novit 3459(1):1-21.
17. Sun YH, Chen SP, Wang YP, Hu W, Zhu ZY. 2005. Cytoplasmic impact on cross-genus cloned fish derived from transgenic common carp (Cyprinus carpio) nuclei and goldfish (Carassius auratus) enucleated eggs. Biol Reprod 72(3):510-515.
18. Thacker CE. 2003. Molecular phylogeny of the gobioid fishes (Teleostei: Perciformes: Gobioidei). Mol Phylogenet Evol 26(3):354-368.
19. Wang J. 1995. Acute effects of high concentration of dissolved free carbon dioxide and low dissolved oxygen on rare minnow. Acta Hydrob Sinica 19:84-88.
20. Wang J, Cao W. 1997. Gobiocypris rarus and fishes as laboratory animals. Trans Chin Ichthyol Soc 6:144-152.
21. Wang T, Liu P, Chen H, Liu H, Yi Y, Guo W. 1994. Preliminary study on the susceptibility of Gobiocypris rarus to hemorrhagic virus of grass carp (GCHV). Acta Hydrob Sinica 18:144-149.
22. Wu W, Schmidt TR, Goodman M, Grossman LI. 2000. Molecular evolution of cytochrome c oxidase subunit I in primates: Is there coevolution between mitochondrial and nuclear genomes? Mol Phylogenet Evol 17(2):294-304.
23. Zhu ZY, Sun YH. 2000. Embryonic and genetic manipulation in fish. Cell Res 10(1):17-27.