Automated image analysis of fluorescence microscopic images to identify protein-protein interactions

Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings

Volumn 7 VOLS, Issue , 2005, Pages 797-800

  Venkataraman, Sankar ^a   Morrell Falvey, Jennifer L ^b   Doktycz, Mitchel J ^b   Hairong, Qi ^c  

^a University of Tennessee Knoxville   (United States)

^b OAK RIDGE NATIONAL LABORATORY   (United States)

^c UNIVERSITY OF TENNESSEE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; DATA STRUCTURES; FEATURE EXTRACTION; INFORMATION ANALYSIS; PROTEINS; STATISTICAL METHODS;

AUTOMATED IMAGE ANALYSIS; FLUORESCENCE MICROSCOPIC IMAGES; FUNCTIONAL INFORMATION; TEMPORAL LOCALIZATION;

IMAGE ANALYSIS;

EID: 33846924575     PISSN: 05891019     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/iembs.2005.1616535     Document Type: Conference Paper

References (12)

1. Z. Ding, Z. Zhao, S.J. Jakubowski, et al. "A novel cytology-based, two-hybrid screen for bacteria applied to protein-protein interaction studies of a type IV secretion system", J. of Bacteriology, pp. 5572-5582, Oct. 2002.
2. M.V. Boland and R.F. Murphy, "After sequencing: Quantitative analysis of protein localization", Engr. in Genomics, Oct. 1999.
3. D.W. Shattuck and R.M. Leahy, "Automated graph-based analysis and correction of cortical volume topology", IEEE Trans. on Medical Imaging, vol. 20, no. 11, Nov. 2001.
4. B.W. Reutter, G.J. Klein, and R.H. Huesman, "Automated 3-D segmentation of respiratory-gated PET transmission images", IEEE Trans. on Nuclear Science, 44(6):2473-2476, 1997.
5. C.A. Glasbey, "Problems in digital microscopy", Abstracts of Invited Papers at XVIII Intern. Biometric Conf., Amsterdam, 183-200, 1996.
6. T.N. Davis, "Protein localization in proteomics", Current Opinion in Chemical Biology 8:49-53, 2004.
7. M.V. Boland and R.F. Murphy, "A neural network classifier capable of recognizing the patterns of all major sub-cellular structures in fluorescence microscope images of HeLa cells", Bioinformatics vol.17, no. 12, 2001.
8. F.W. Larimer, P. Chain, L. Hauer, J. Lamerdin, S. Malfatti, et al., "Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris", Nat. Biotech, 22, 55, 2004.
9. L. Guzman, D. Belin, M.J. Carson, and J. Beckwith, "Tight regulation, modulation, and high level expression by vectors containing the arabinose PBAD promoter", J. Bacteriol, 177, 4121, 1995.
10. J. Astron, 79, 745 and 1972, J. Opt. Soc. Am. 62, 55, 1974.
11. J. Canny, "A computational approach to edge detection," IEEE PAMI, 8(6):678-698, 1986.
12. N. Otsu, "A threshold selection method from gray level histograms", IEEE Trans. Syst. Man Cybern. SMC-9, 62-66, 1979.