메뉴 건너뛰기




Volumn 8, Issue , 2007, Pages

Separation of base allele and sampling term effects gives new insights in variance component QTL analysis

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ALLELE; ANALYSIS OF VARIANCE; ARTICLE; CONTROLLED STUDY; COVARIANCE; FEMALE; GENETIC ALGORITHM; HETEROZYGOTE; HOMOZYGOTE; HUMAN; LINKAGE ANALYSIS; MALE; PHENOTYPE; PREDICTION; QUANTITATIVE TRAIT LOCUS MAPPING; SIMULATION; STATISTICAL MODEL;

EID: 33846829651     PISSN: None     EISSN: 14712156     Source Type: Journal    
DOI: 10.1186/1471-2156-8-1     Document Type: Article
Times cited : (15)

References (40)
  • 1
    • 0025245437 scopus 로고
    • Multipoint analysis of human quantitative genetic variation
    • 1683895
    • Goldgar DE Multipoint analysis of human quantitative genetic variation American Journal of Human Genetics 1990 47 957-967 1683895 2239972
    • (1990) American Journal of Human Genetics , vol.47 , pp. 957-967
    • Goldgar, D.E.1
  • 2
    • 0035220056 scopus 로고    scopus 로고
    • Variance component methods for detecting complex trait loci
    • Blangero J Williams JT Almasy L Variance component methods for detecting complex trait loci Advances in Genetics 2001 42 151 181 11037320
    • (2001) Advances in Genetics , vol.42 , pp. 151-181
    • Blangero, J.1    Williams, J.T.2    Almasy, L.3
  • 3
    • 0031442937 scopus 로고    scopus 로고
    • Multipoint oligogenic linkage analysis of quantitative traits
    • 10.1002/(SICI)1098-2272(1997)14:6<959::AID-GEPI66>3.0.CO;2-K
    • Blangero J Almasy L Multipoint oligogenic linkage analysis of quantitative traits Genetic Epidemiology 1997 14 959 964 10.1002/ (SICI)1098-2272(1997)14:6<959::AID-GEPI66>3.0.CO;2-K 9433607
    • (1997) Genetic Epidemiology , vol.14 , pp. 959-964
    • Blangero, J.1    Almasy, L.2
  • 4
    • 0030448747 scopus 로고    scopus 로고
    • Mapping quantitative trait loci via residual maximum likelihood: II. A simulation study
    • Grignola FE Hoeschele I Zhang Q Tier B Mapping quantitative trait loci via residual maximum likelihood: II. A simulation study Genet Sel Evol 1996 28 491 505
    • (1996) Genet Sel Evol , vol.28 , pp. 491-505
    • Grignola, F.E.1    Hoeschele, I.2    Zhang, Q.3    Tier, B.4
  • 5
    • 0028810715 scopus 로고
    • A random model approach to interval mapping of quantitative trait loci
    • 1206840
    • Xu S Atchley WR A random model approach to interval mapping of quantitative trait loci Genetics 1995 141 1189 1197 1206840 8582623
    • (1995) Genetics , vol.141 , pp. 1189-1197
    • Xu, S.1    Atchley, W.R.2
  • 6
    • 0001244316 scopus 로고
    • Marker-assisted selection using best linear unbiased prediction
    • Fernando RL Grossman M Marker-assisted selection using best linear unbiased prediction Genet Sel Evol 1989 21 467 477
    • (1989) Genet Sel Evol , vol.21 , pp. 467-477
    • Fernando, R.L.1    Grossman, M.2
  • 7
    • 0015309467 scopus 로고
    • The investigation of linkage between a quantitative trait and a marker locus
    • 10.1007/BF01066731
    • Haseman JK Elston RC The investigation of linkage between a quantitative trait and a marker locus Behav Genet 1972 2 3 9 10.1007/BF01066731 4157472
    • (1972) Behav Genet , vol.2 , pp. 3-9
    • Haseman, J.K.1    Elston, R.C.2
  • 9
    • 0000803318 scopus 로고
    • Construction of multilocus maps in humans
    • 304651
    • Lander ES Green P Construction of multilocus maps in humans Proc Natl Acad Sci 1987 84 2363 2367 304651 3470801 10.1073/pnas.84.8.2363
    • (1987) Proc Natl Acad Sci , vol.84 , pp. 2363-2367
    • Lander, E.S.1    Green, P.2
  • 10
    • 0030833349 scopus 로고    scopus 로고
    • Markov chain Monte Carlo segregation and linkage analysis for oligogenic models
    • 1715966
    • Heath S Markov chain Monte Carlo segregation and linkage analysis for oligogenic models American Journal of Human Genetics 1997 61 748 760 1715966 9326339
    • (1997) American Journal of Human Genetics , vol.61 , pp. 748-760
    • Heath, S.1
  • 11
    • 0034766322 scopus 로고    scopus 로고
    • A simple and rapid method for calculating identity-by-descent matrices using multiple markers
    • 10.1051/gse:2001127
    • Pong-Wong R George AW Woolliams JA Haley CS A simple and rapid method for calculating identity-by-descent matrices using multiple markers Genet Sel Evol 2001 33 453 471 10.1051/gse:2001127 11712969
    • (2001) Genet Sel Evol , vol.33 , pp. 453-471
    • Pong-Wong, R.1    George, A.W.2    Woolliams, J.A.3    Haley, C.S.4
  • 12
    • 18144440348 scopus 로고    scopus 로고
    • Precision of methods for calculating identity-by-descent matrices using multiple markers
    • 10.1051/gse:2002023
    • Sørensen AC Pong-Wong R Winding JJ Woolliams JA Precision of methods for calculating identity-by-descent matrices using multiple markers Genet Sel Evol 2002 34 557 579 10.1051/gse:2002023 12427386
    • (2002) Genet Sel Evol , vol.34 , pp. 557-579
    • Sørensen, A.C.1    Pong-Wong, R.2    Winding, J.J.3    Woolliams, J.A.4
  • 13
    • 0001234878 scopus 로고
    • A mixed model for analyses of data on multiple genetic markers
    • Goddard ME A mixed model for analyses of data on multiple genetic markers Theoretical and Applied Genetics 1992 83 878 886 10.1007/ BF00226711
    • (1992) Theoretical and Applied Genetics , vol.83 , pp. 878-886
    • Goddard, M.E.1
  • 14
    • 0035676846 scopus 로고    scopus 로고
    • The validity of genetic models underlying quantitative traits
    • Goddard ME The validity of genetic models underlying quantitative traits Livestock Production Science 2001 72 117 127 10.1016/ S0301-6226(01)00272-X
    • (2001) Livestock Production Science , vol.72 , pp. 117-127
    • Goddard, M.E.1
  • 15
    • 0034143958 scopus 로고    scopus 로고
    • Quantitative trait locus mapping using human pedigrees
    • Blangero J Williams JT Almasy L Quantitative trait locus mapping using human pedigrees Human Biology 2000 72 35 62
    • (2000) Human Biology , vol.72 , pp. 35-62
    • Blangero, J.1    Williams, J.T.2    Almasy, L.3
  • 16
    • 0035528922 scopus 로고    scopus 로고
    • Methods for Linkage Analysis of Quantitative Trait Loci in Humans
    • 10.1006/tpbi.2001.1545
    • Feingold E Methods for Linkage Analysis of Quantitative Trait Loci in Humans Theoretical Population Biology 2001 60 167 180 10.1006/ tpbi.2001.1545 11855951
    • (2001) Theoretical Population Biology , vol.60 , pp. 167-180
    • Feingold, E.1
  • 17
    • 1442308250 scopus 로고    scopus 로고
    • Introduction to the special issue on variance components methods for mapping quantitative trait loci
    • Cherny SS Sham PC Cardon LR Introduction to the special issue on variance components methods for mapping quantitative trait loci Behavior Genetics 2004 34 125 126 10.1023/B:BEGE.0000013938.54772.42
    • (2004) Behavior Genetics , vol.34 , pp. 125-126
    • Cherny, S.S.1    Sham, P.C.2    Cardon, L.R.3
  • 18
    • 20444472340 scopus 로고    scopus 로고
    • Mapping quantitative trait loci in humans: Achievements and limitations
    • 1137003
    • Majumder PP Ghosh S Mapping quantitative trait loci in humans: achievements and limitations Journal of Clinical Investigation 2005 115 1419 1424 1137003 15931376 10.1172/JCI24757
    • (2005) Journal of Clinical Investigation , vol.115 , pp. 1419-1424
    • Majumder, P.P.1    Ghosh, S.2
  • 19
    • 0037522653 scopus 로고    scopus 로고
    • The use of marker haplotypes in animal breeding schemes
    • Meuwissen THE Goddard ME The use of marker haplotypes in animal breeding schemes Gen Sel Evol 1996 28 161 176
    • (1996) Gen Sel Evol , vol.28 , pp. 161-176
    • Meuwissen, T.H.E.1    Goddard, M.E.2
  • 20
    • 0016704147 scopus 로고
    • Best linear unbiased estimation and prediction under a selection model
    • 10.2307/2529430
    • Henderson CR Best linear unbiased estimation and prediction under a selection model Biometrics 1975 31 423 447 10.2307/2529430 1174616
    • (1975) Biometrics , vol.31 , pp. 423-447
    • Henderson, C.R.1
  • 22
    • 0027720035 scopus 로고
    • Statistical genetic approaches to human adaptability
    • Blangero J Statistical genetic approaches to human adaptability Human Biology 1993 65 941 966
    • (1993) Human Biology , vol.65 , pp. 941-966
    • Blangero, J.1
  • 23
    • 0030455780 scopus 로고    scopus 로고
    • Computation of the full likelihood function for estimating variance at a quantitative trait locus
    • 1207742
    • Xu S Computation of the full likelihood function for estimating variance at a quantitative trait locus Genetics 1996 144 1951 1960 1207742 8978078
    • (1996) Genetics , vol.144 , pp. 1951-1960
    • Xu, S.1
  • 24
    • 0041309176 scopus 로고    scopus 로고
    • In all likelihood: Statistical modelling and inference using likelihood
    • Oxford, UK, Oxford University Press
    • Pawitan Y In all likelihood: Statistical modelling and inference using likelihood Oxford, UK, Oxford University Press 2001
    • (2001)
    • Pawitan, Y.1
  • 25
    • 0003556357 scopus 로고    scopus 로고
    • Danish Institute of Agricultural Science, Research Centre Foulum, Denmark
    • Madsen P Jensen J A user's guide to DMU Danish Institute of Agricultural Science, Research Centre Foulum, Denmark 2000
    • (2000) A User's Guide to DMU
    • Madsen, P.1    Jensen, J.2
  • 28
    • 0028219062 scopus 로고
    • Mapping quantitative trait loci in crosses between outbred lines using least squares
    • 1205874
    • Haley CS Knott SA Elsen JM Mapping quantitative trait loci in crosses between outbred lines using least squares Genetics 1994 136 1195 1207 1205874 8005424
    • (1994) Genetics , vol.136 , pp. 1195-1207
    • Haley, C.S.1    Knott, S.A.2    Elsen, J.M.3
  • 29
    • 84972496336 scopus 로고
    • That BLUP is a good thing: The estimation of random effects
    • Robinson GK That BLUP is a good thing: The estimation of random effects Statistical Science 1991 6 15 51
    • (1991) Statistical Science , vol.6 , pp. 15-51
    • Robinson, G.K.1
  • 30
    • 0041488856 scopus 로고    scopus 로고
    • The twofold difference in adult size between the red junglefowl and White Leghorn chickens is largely explained by a limited number of QTLs
    • 10.1046/j.1365-2052.2003.01000.x
    • Kerje S Carlborg Ö Jacobsson L Schütz K Hartmann C Jensen P Andersson L The twofold difference in adult size between the red junglefowl and White Leghorn chickens is largely explained by a limited number of QTLs Animal Genetics 2003 34 264 274 10.1046/ j.1365-2052.2003.01000.x 12873214
    • (2003) Animal Genetics , vol.34 , pp. 264-274
    • Kerje, S.1    Carlborg, Ö.2    Jacobsson, L.3    Schütz, K.4    Hartmann, C.5    Jensen, P.6    Andersson, L.7
  • 31
    • 5344244656 scopus 로고    scopus 로고
    • Vienna, Austria, R Foundation for Statistical Computing
    • R Development Core Team R: A language and environment for statistical computing Vienna, Austria, R Foundation for Statistical Computing 2004 http://www.R-project.org
    • (2004) R: A Language and Environment for Statistical Computing
  • 33
    • 0345270031 scopus 로고    scopus 로고
    • Simple deterministic identity-by-descent coefficients and estimation of QTL allelic effects in full and half sibs
    • 12688663
    • Nagamine Y Knott SA Visscher PM Haley CS Simple deterministic identity-by-descent coefficients and estimation of QTL allelic effects in full and half sibs 2002 80 237 243 12688663
    • (2002) , vol.80 , pp. 237-243
    • Nagamine, Y.1    Knott, S.A.2    Visscher, P.M.3    Haley, C.S.4
  • 34
    • 24944504407 scopus 로고    scopus 로고
    • Transformation of QTL genotypic effects to allelic effects
    • 10.1051/gse:2005017 16093016
    • Nagamine Y Transformation of QTL genotypic effects to allelic effects Genet Sel Evol 2005 37 579 584 10.1051/gse:2005017 16093016
    • (2005) Genet Sel Evol , vol.37 , pp. 579-584
    • Nagamine, Y.1
  • 35
    • 0031966959 scopus 로고    scopus 로고
    • Multipoint quantitative-trait linkage analysis in general pedigrees
    • 1377101 10.1086/301844
    • Almasy L Blangero J Multipoint quantitative-trait linkage analysis in general pedigrees American Journal of Human Genetics 1998 62 1198 1211 1377101 9545414 10.1086/301844
    • (1998) American Journal of Human Genetics , vol.62 , pp. 1198-1211
    • Almasy, L.1    Blangero, J.2
  • 36
    • 0024190141 scopus 로고
    • Programs for pedigree analysis: MENDEL, FISHER, and dGene
    • 10.1002/gepi.1370050611 3061869
    • Lange K Weeks D Boehnke M Programs for pedigree analysis: MENDEL, FISHER, and dGene Genetic Epidemiology 1988 5 471 473 10.1002/ gepi.1370050611 3061869
    • (1988) Genetic Epidemiology , vol.5 , pp. 471-473
    • Lange, K.1    Weeks, D.2    Boehnke, M.3
  • 37
    • 33747613794 scopus 로고    scopus 로고
    • Estimating the power of variance component linkage analysis in large pedigrees
    • 10.1002/gepi.20160 16685720
    • Chen W-M Abecasis GR Estimating the power of variance component linkage analysis in large pedigrees Genetic Epidemiology 2006 30 471 484 10.1002/ gepi.20160 16685720
    • (2006) Genetic Epidemiology , vol.30 , pp. 471-484
    • Chen, W.-M.1    Abecasis, G.R.2
  • 38
    • 30444435351 scopus 로고    scopus 로고
    • An efficient variance component approach implementing an average information REML suitable for combined LD and linkage mapping with a general complex pedigree
    • 10.1051/gse:2005025 16451790
    • Lee SH van der Werf JHJ An efficient variance component approach implementing an average information REML suitable for combined LD and linkage mapping with a general complex pedigree Genet Sel Evol 2006 38 25 43 10.1051/gse:2005025 16451790
    • (2006) Genet Sel Evol , vol.38 , pp. 25-43
    • Lee, S.H.1    van der Werf, J.H.J.2
  • 39
    • 0034055765 scopus 로고    scopus 로고
    • Fine mapping of quantitative trait loci using linkage disequilibria with closely linked marker loci
    • 1461086 10790414
    • Meuwissen THE Goddard ME Fine mapping of quantitative trait loci using linkage disequilibria with closely linked marker loci Genetics 2000 155 421 430 1461086 10790414
    • (2000) Genetics , vol.155 , pp. 421-430
    • Meuwissen, T.H.E.1    Goddard, M.E.2
  • 40
    • 84872275851 scopus 로고    scopus 로고
    • A new efficient method for QTL mapping in divergent intercrosses incorporating within line variation
    • Paper no. 20-07 at the Belo Horizonte, Brazil
    • Rönnegård L Carlborg Ö A new efficient method for QTL mapping in divergent intercrosses incorporating within line variation Paper no. 20-07 at the 8th World Congress on Genetics Applied to Livestock Production, Belo Horizonte, Brazil 2006
    • (2006) 8th World Congress on Genetics Applied to Livestock Production
    • Rönnegård, L.1    Carlborg, Ö.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.