Analysis and phylogenetic comparisons of full-length VP2 genes of the 24 bluetongue virus serotypes

Journal of General Virology

Volumn 88, Issue 2, 2007, Pages 621-630

  Maan, S ^a   Maan, N S ^a   Samuel, A R ^a   Rao, S ^a,b   Attoui, H ^a   Mertens, Peter P C ^a  

^a INSTITUTE FOR ANIMAL HEALTH   (United Kingdom)

^b CLEMSON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; DOUBLE STRANDED RNA; NEUTRALIZING ANTIBODY; PROTEIN VP2;

AMINO ACID SEQUENCE; ANTIBODY RESPONSE; ARTICLE; BLUETONGUE ORBIVIRUS; GENE DELETION; GENE INSERTION; GENETIC ANALYSIS; GENETIC SIMILARITY; GENETIC VARIABILITY; INVERTED REPEAT; MOLECULAR CLONING; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SEROTYPE; UNTRANSLATED REGION; VIRAL GENETICS; VIRUS GENOME; VIRUS IDENTIFICATION;

ANIMALS; BASE SEQUENCE; BLUETONGUE VIRUS; CAPSID PROTEINS; CLONING, MOLECULAR; MOLECULAR SEQUENCE DATA; PHYLOGENY; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SEROTYPING; VARIATION (GENETICS);

BLUETONGUE VIRUS; MAMMALIA; MIRIDAE;

EID: 33846796136     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/vir.0.82456-0     Document Type: Article

References (63)

1. Alexander, G. I., Alexander, M. P. & St George, T. D. (1996). Bluetongue: its impact on international trade in meat and livestock. In Proceedings of the First Southeast Asia and Pacific Regional Bluetongue Symposium. Kunming, August 22-24, 1995, pp. 254-258. Edited by T. D. St George & P. Kegao. Canberra: Australian Centre for International Agricultural Research.
2. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
3. Anzola, J. V., Xu, Z., Asamizu, T. & Nuss, D. L. (1987). Segment-specific inverted repeats found adjacent to conserved terminal sequences in wound tumor virus genome and defective interfering RNAs. Proc Natl Acad Sci U S A 84, 8301-8305.
4. Appleton, J. A. & Letchworth, G. J. (1983). Monoclonal antibody analysis of serotype restricted and unrestricted bluetongue viral antigen determinants. Virology 124, 286-289.
5. Attoui, H., Billoir, F., Cantaloube, J. F., Biagini, P., de Micco, P. & de Lamballerie, X. (2000). Strategies for the sequence determination of viral dsRNA genomes. J Virol Methods 89, 147-158.
6. Bernard, K. A., Israel, B. A., Wilson, W. C. & Schultz, K. T. (1997). Sequence and cognitive analyses of two virulence-associated markers of bluetongue virus serotype 17. Intervirology 40, 226-231.
7. Bonneau, K. R., Zhang, N., Zhu, J., Zhang, F., Li, Z., Zhang, K., Xiao, L., Xiang, W. & MacLachlan, N. J. (1999). Sequence comparison of the L2 and S1O genes of bluetongue viruses from the United States and the People's Republic of China. Virus Res 61, 153-160.
8. Cowley, J. A. & Gorman, B. M. (1987). Genetic reassortment for the identification of the genome segment coding for the bluetongue virus hemagglutinin. J Virol 61, 2304-2306.
9. Cowley, J. A. & Gorman, B. M. (1989). Cross neutralization of genetic reassortants of bluetongue virus serotypes 20 and 21. Vet Microbial 19, 37-51.
10. de Mattos, C. A., de Mattos, C. C., Osburn, B. I. & MacLachlan, N. J. (1994). Heterogeneity of the L2 gene of field isolates of bluetongue virus serotype 17 from the San Joaquin Valley of California. Virus Res 31, 67-87.
11. DeMaula, C. D., Heidner, H. W., Rossitto, P. V., Pierce, C. M. & MacLachlan, N. J. (1993). Neutralization determinants of United States bluetongue virus serotype ten. Virology 195, 292-296.
12. DeMaula, C. D., Bonneau, K. R. & MacLachlan, N. J. (2000). Changes in the outer capsid proteins of bluetongue virus serotype ten that abrogate neutralization by monoclonal antibodies. Virus Res 67, 59-66.
13. Eaton, B. T. & Crameri, G. S. (1989). The site of bluetongue virus attachment to glycophorins from a number of animal erythrocytes. J Gen Virol 70, 3347-3353.
14. Erasmus, B. J. (1990). Bluetongue virus. In Virus infections of ruminants, vol. 3, pp. 227-237. Edited by Z. Dinter & B. Morein. New York: Elsevier Science Publishers.
15. Fukusho, A., Ritter, G. D. & Roy, P. (1987). Variation in the bluetongue virus neutralization protein VP2. J Gen Virol 68, 2967-2973.
16. Ghiasi, H., Fukusho, A., Eshita, Y. & Roy, P. (1987). Identification and characterization of conserved and variable regions in the neutralization VP2 gene of bluetongue virus. Virology 160, 100-109.
17. Gould, A. R. (1988). Conserved and non-conserved regions of the outer coat protein, VP2, of the Australian bluetongue serotype 1 virus, revealed by sequence comparison to the VP2 of North American BTV serotype 10. Virus Res 9, 145-158.
18. Gould, A. R. & Eaton, B. T. (1990). The amino acid sequence of the outer coat protein VP2 of neutralizing monoclonal antibody-resistant, virulent and attenuated bluetongue viruses. Virus Res 17, 161-172.
19. Gould, A. R. & Pritchard, L. I. (1990). Relationships amongst bluetongue viruses revealed by comparisons of capsid and outer coat protein nucleotide sequences. Virus Res 17, 31-52.
20. Huismans, H. & Erasmus, B. J. (1981). Identification of the serotype-specific and group specific antigens of bluetongue virus. Onderstepoort J Vet Res 48, 51-58.
21. Huismans, H., van der Walt N. T., Cloete, M. & Erasmus, B. J. (1983). The biochemical and immunological characterization of bluetongue virus outer capsid polypeptides. In Double-Stranded RNA Viruses, pp. 165-172. Edited by R. W. Compans & D. H. L. Bishop. New York: Elsevier.
22. Huismans, H., van der Walt N. T., Cloete, M. & Erasmus, B. J. (1987). Isolation of a capsid protein of bluetongue virus that induces a protective immune response in sheep. Virology 157, 172-179.
23. Hwang, G. Y. & Li, J. K. (1993). Identification and localization of a serotypic neutralization determinant on the VP2 protein of bluetongue virus 13. Virology 195, 859-862.
24. Inumaru, S. & Roy, P. (1987). Production and characterization of the neutralization antigen VP2 of bluetongue virus serotype 10 using a baculovirus expression vector. Virology 157, 472-479.
25. Iwata, H., Hirasawa, T. & Roy, P. (1991). Complete nucleotide sequence of segment 5 of epizootic haemorrhagic disease virus; the outer capsid protein VP5 is homologous to the VP5 protein of bluetongue virus. Virus Res 20, 273-281.
26. Iwata, H., Chuma, T. & Roy, P. (1992a). Characterization of the genes encoding two of the major capsid proteins of epizootic haemorrhagic disease virus indicates a close genetic relationship to bluetongue virus. J Gen Virol 73, 915-924.
27. Iwata, H., Yamagawa, M. & Roy, P. (1992b). Evolutionary relationships among the gnat-transmitted orbiviruses that cause African horse sickness, bluetongue, and epizootic hemorrhagic disease as evidenced by their capsid protein sequences. Virology 191, 251-261.
28. Kahlon, J., Sugiyama, K. & Roy, P. (1983). Molecular basis of bluetongue virus neutralization. J Virol 48, 627-632.
29. Kozak M. (1987). At least six nucleotides preceding the AUG initiator codon enhance translation in mammalian cells. J Mol Biol 196, 947-950.
30. Kumar, S., Tamura, K., Jakobsen, I. B. & Nei, M. (2001). MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17, 1244-1245.
31. Lambden, P. R., Cooke, S. J., Caul, E. O. & Clarke, I. N. (1992). Cloning of non cultivable human rotavirus by single primer amplification. J Virol 66, 1817-1822.
32. Maan, S. (2004). Complete nucleotide sequence analyses of genome segment 2 from flie twenty-four serotypes of bluetongue virus: development of nucleic acid based typing methods and molecular epidemiology. PhD thesis, University of London.
33. Maan, S., Samuel, A. R., Maan, N. S., Attoul, H., Rao, S. & Mertens, P. P. C. (2004a). Molecular epidemiology of bluetongue viruses from disease outbreaks in the Mediterranean Basin. In Bluetongue Part II. Edited by N. J. MacLachlan & J. E. Pearson. Proceedings of the Third International Symposium. Taormina, 26-29 October 2003. Vet Ital 40, 489-496.
34. Maan, S., Maan, N. S., Singh, K. P., Samuel, A. R. & Mertens, P. P. C. (2004b). The development of RT-PCR based assays and sequencing for typing European strains of bluetongue virus and differential diagnosis of field and vaccine strains. In Bluetongue Part II. Edited by N. J. MacLachlan & J. E. Pearson. Proceedings of the Third International Symposium. Taormina, 26-29 October 2003. Vet Ital 40, 552-561.
35. Mertens, P. P. C. (1999). Orbiviruses and coltiviruses - general features. In Encyclopaedia of Virology, 2nd edn, pp. 1043-1061. Edited by R. G. Webster & A. Granoff. London: Academic Press.
36. Mertens, P. P. C. & Sangar, D. V. (1985). Analysis of the terminal sequences of the genome segments of four orbiviruses. Virology 140, 55-67.
37. Mertens, P. P. C. & Mellor, P. S. (2003). Bluetongue. State Vet J 13, 18-25.
38. Mertens, P. P. C., Burroughs, J. N. & Anderson, J. (1987a). Purification and properties of virus particles, infectious subviral particles, and cores of bluetongue virus serotypes 1 and 4. Virology 157, 375-386.
39. Mertens, P. P. C., Pedley, S., Cowley, J. & Burroughs, J. N. (1987b). A comparison of six different bluetongue virus isolates by cross-hybridization of the dsRNA genome segments. Virology 161, 438-447.
40. Mertens, P. P. C., Pedley, S., Cowley, J., Burroughs, J. N., Corteyn, A. H., Jeggo, M. H., Jennings, D. M. & Gorman, B. M. (1989). Analysis of the roles of bluetongue virus outer capsid proteins VP2 and VP5 in determination of virus serotype. Virology 170, 561-565.
41. Mertens, P. P. C., Maan, S., Samuel, A. & Attoul, H. (2004). Orbivirus, Reoviridae. In Virus Taxonomy, VIIIth Report of the ICTV, pp. 466-483. Edited by C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger & L. A. Ball. Elsevier/Academic Press, London.
42. Moss, S. R., Jones, L. D. & Nuttall, P. A. (1992). Comparison of the major structural core proteins of tick-borne and Culicoides-borne orbiviruses. J Gen Virol 73, 2585-2590.
43. Muramoto, Y., Takada, A., Fujii, K., Noda, T., Iwatsuki-Horimoto, K., Watanabe, S., Horimoto, T., Kida, H. & Kawaoka, Y. (2006). Hierarchy among viral RNA (vRNA) segments in their role in vRNA incorporation into influenza A virions. J Virol 80, 2318-2325.
44. Noda, T., Sagara, H., Yen, A., Takada, A., Kida, H., Cheng, R. H. & Kawaoka, Y. (2006). Architecture of ribonucleoprotein complexes in influenza A virus particles. Nature 439, 490-492.
45. OIE (2000). Manual of Standards for Diagnostic Tests and Vaccines: List A and B diseases of mammals, birds and bees, 4th edn. Paris: Office International des Epizooties.
46. Pierce, C. M., Rossitto, P. V. & MacLachlan, N. J. (1995). Homotypic and heterotypic neutralization determinants of bluetongue virus serotype 17. Virology 209, 263-267.
47. Potgieter, A. C., Monaco, F., Mangana, O., Nomikou, K., Yadin, H. & Savini, G. (2005). VP2-segment sequence analysis of some isolates of bluetongue virus recovered in the Mediterranean Basin during the 1998-2003 outbreak. J Vet Med B Infect Dis Vet Public Health 52, 372-379.
48. Pritchard, L. I. & Gould, A. R. (1995). Phylogenetic comparison of the serotype-specific VP2 protein of bluetongue and related orbiviruses. Virus Res 39, 207-220.
49. Purse, B. V., Mellor, P. S., Rogers, D. J., Samuel, A. R., Mertens, P. P. C. & Baylis, M. (2005). Climate change and the recent emergence of bluetongue in Europe. Nat Rev Microbial 3, 171-181.
50. Rao, C. D., Kiuchi, A. & Roy, P. (1983). Homologous terminal sequences of the genome double-stranded RNAs of bluetongue virus. J Virol 46, 378-383.
51. Roy, P. (1989). Bluetongue virus genetics and genome structure. Virus Res 13, 179-206.
52. Roy, P., Hirasawa, T., Fernandez, M., Blinov, V. M. & Sanchez-Vixcain Rodrique, J. M. (1991). The complete sequence of the group-specific antigen, VP7, of African horsesickness disease virus serotype 4 reveals a close relationship to bluetongue virus. J Gen Virol 72, 1237-1241.
53. Roy, P., Bishop, D. H., LeBlois, H. & Erasmus, B. J. (1994). Long-lasting protection of sheep against bluetongue challenge after vaccination with virus-like particles: evidence for homologous and partial heterologous protection. Vaccine 12, 805-811.
54. Shapiro, A., Green, T., Rao, S., White, S., Carner, G., Mertens, P. P. C. & Becnel, J. J. (2005). Morphological and molecular characterization of a cypovirus (Reoviridae) from the mosquito Uranotaenia sapphirina (Diptera: Culicidae). J Virol 79, 9430-9438.
55. Tabachnick, W. J. (1996). Culicoides variipennis and bluetongue-virus epidemiology in the United States. Annu Rev Entomol 41, 23-43.
56. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
57. Vreede, F. T., Cloete, M., Napier, G. B., Van Dijk, A. A. & Viljoen, G. J. (1998). Sequence-independent amplification and cloning of large dsRNA virus genome segments by poly(dA)-oligonucleotide ligation. J Virol Methods 72, 243-247.
58. Williams, C. F., Inoue, T., Lucus, A. M., Zanotto, P. M. & Roy, P. (1998). The complete sequence of four major structural proteins of African horse sickness virus serotype 6: evolutionary relationships within and between the orbiviruses. Virus Res 53, 53-73.
59. Yamaguchi, S., Fukusho, A. & Roy, P. (1988a). Complete sequence of VP2 gene of the bluetongue virus Australian serotype 1 (BTV-1). Nucleic Acids Res 16, 2725.
60. Yamaguchi, S., Fukusho, A. & Roy, P. (1988b). Complete sequence of neutralization protein VP2 of the recent US isolate bluetongue virus serotype 2: its relationship with VP2 species of other US serotypes. Virus Res 11, 49-58.
61. Yamakawa, M., Krasnyck, V. & Roy, P. (1994). Phylogenetic relationships of the VP2 protein of a virulent isolate of bluetongue virus (BTV-23) compared to those of 6 other BTV serotypes. Virus Res 34, 81-92.
62. Yamakawa, M., Furuuchi, S. & Minobe, Y. (1999). Molecular characterization of double-stranded RNA segments encoding the major capsid proteins of a Palyam serogroup orbivirus that caused an epizootic of congenital abnormalities in cattle. J Gen Virol 80, 205-208.
63. Zhang, N., MacLachlan, N. J., Bonneau, K. R., Zhu, J., Li, Z., Zhang, K, Zhang, F., Xia, L. & Xiang, W. (1999). Identification of seven serotypes of bluetongue virus from the People's Republic of China. Vet Rec 145, 427-429.