Quantification of single-stranded nucleic acid and oligonucleotide interactions with metal ions by affinity capillary electrophoresis: Part I

Journal of Biological Inorganic Chemistry

Volumn 12, Issue 2, 2007, Pages 194-203

  Stettler, Alexandra R ^a   Chaurin, Valérie ^a   Constable, Edwin C ^a   Housecroft, Catherine E ^a   Schwarz, Maria A ^a  

^a UNIVERSITY OF BASEL   (Switzerland)

Author keywords

Affinity capillary electrophoresis; Buffer; Metal cation; Oligonucleotide

Indexed keywords

3 MORPHOLINOPROPANESULFONIC ACID; CALCIUM; DIVALENT CATION; MAGNESIUM; MANGANESE; METAL ION; NICKEL; OLIGONUCLEOTIDE; SULFONIC ACID DERIVATIVE; TRANSITION ELEMENT; TROMETAMOL; UNCLASSIFIED DRUG;

ARTICLE; BINDING AFFINITY; CAPILLARY ELECTROPHORESIS; METAL BINDING; MIGRATION; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS;

CALCIUM; CATIONS, DIVALENT; DNA; ELECTROPHORESIS, CAPILLARY; MAGNESIUM; MANGANESE; METALS; MORPHOLINES; NICKEL; NUCLEIC ACIDS; OLIGONUCLEOTIDES; TROMETHAMINE;

EID: 33846671850     PISSN: 09498257     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00775-006-0180-z     Document Type: Article

References (58)

1. Human Genome Program (2003) Genomics and its impact on science and society: a 2003 Primer. US Department of Energy
2. Sigel H (ed) (1979) Metal ions in biological systems, vol 8. Nucleotides and derivatives: their ligating ambivalency
3. Sigel A, Sigel H (eds) (1996) Metal ions in biological systems, vol 32. Interactions of metal ions with nucleotides, nucleic acids, and their constituents
4. Sigel A, Sigel H (eds) (1996) Metal ions in biological systems, vol 33. Probing of nucleic acids by metal ion complexes of small molecules
5. de la Fuente M, Hernanz A, Navarro R (2004) J Biol Inorg Chem 9:973-986
6. Kankia BI (2004) Biopolymers 74:232-239
7. Sigel H, Griesser R (2005) Chem Soc Rev 34:875-900
8. He XY, Ding YS, Li DZ, Lin BC (2004) Electrophoresis 25:697-711
9. Heegaard NHH (2003) Electrophoresis 24:3879-3891
10. Guijt-van Duijn RM, Frank J, van Dedem GWK, Baltussen E, Schalkhammer T (2001) Electrophoresis 22:1247-1247
11. Arakawa H, Neault JF, Tajmir-Riahi HA (2001) Biophys J 81:1580-1587
12. Ahmad R, Arakawa H, Tajmir-Riahi HA (2003) Biophys J 84:2460-2466
13. Ouameur AA, Arakawa H, Ahmad R, Naoui M, Tajmir-Riahi HA (2005) DNA Cell Biol 24:394-401
14. Hjertén S (1985) J Chromatogr A 347:191-198
15. Rüttinger H-H (2003) In: Neubert RHH, Rüttinger H-H (eds) Affinity capillary electrophoresis in pharmaceutics and biopharmaceutics. Dekker, New York, pp 23-43
16. Stellwagen NC, Bossi A, Gelfi C, Righetti PG (2000) Anal Biochem 287:167-175
17. Sokołowska M, Bal W (2005) J Inorg Biochem 99:1653-1660
18. Taha M, Khalil MM, Mohamed SA (2005) J Chem Eng Data 50:882-887
19. Good NE, Winget GD, inter W, Connolly TN, Izawa S, Singh RMM (1966) Biochemistry 5:467-477
20. Fischer BE, Haring UK, Tribolet R, Sigel H (1979) Eur J Biochem 94:523-530
21. Ouameur AA, Tajmir-Riahi H-A (2004) J Biol Chem 279:42041-42054
22. Shihabia SK (2000) Electrophoresis 21:2872-2878
23. Hall JL, Liden TM, Swisher JA, Brannon DG (1962) Inorg Chem 1:409-413
24. Bai KS, Martell AE (1969) J Inorg Nucl Chem 31:1697-1707
25. Brignac PJ, Mo C (1975) Anal Chem 47:1465-1466
26. Bologni L, Sabatini A, Vacca A (1983) Inorg Chim Acta 69:71-75
27. Canepari S, Carunchio V, Schina R (1999) Polyhedron 18:3263-3267
28. Rao GN, Murthy CSR, Prakash A (1982) Indian J Chem A 21:203-205
29. Forsling W (1978) Acta Chem Scand A 32:857-865
30. Azab HA, Orabi AS, El-Salam ETA (2001) J Chem Eng Data 46:346-254
31. Anwar Z, Azab H (1999) J Chem Eng Data 44:1151-1157
32. Okafo GN, Brown R, Camilleri (1991) J Chem Soc Chem Commun 864-866
33. Fujimoto BS, Miller JM, Ribeiro NS, Schurr JM (1994) Biophys J 67:304-308
34. Kell GS (1972) In: Franks F (ed) Water - a comprehensive treatise. Plenum, New York, p 406
35. Ivarsson GJM (1982) Acta Crystallogr Sect B 38:1828-1831
36. Zeng M-H, Liang H, Zeng R-Y, Yi X-H, Yu K-B (2002) Acta Chim Sin 60:784-788
37. Packer MJ, Dauncey MP, Hunter CA (2000) J Mol Biol 295:85-103
38. Dixit SB, Beveridge DL, Case DA, Cheatham TE, Giudice E, Lankas F, Lavery R, Maddocks JH, Osman R, Sklenar H, Thayer KM, Varnai P (2005) Biophys J 89:3721-3740
39. Egli M (2004) Curr Opin Chem Biol 8:580-591
40. Abrescia NGA, Huynh-Dinh T, Subirana JA (2002) J Biol Inorg Chem 7:195-199
41. Sponer J, Sabat M, Gorb L, Leszczynski J, Lippert B, Hobza P (2000) J Phys Chem B 104:7535-7544
42. Soler-López M, Malinina L, Subirana JA (2000) J Biol Chem 275:23034-23043
43. Chiu TK, Dickerson RE (2000) J Mol Biol 301:915-945
44. Valls N, Usón I, Gouyette C, Subirana JA (2004) J Am Chem Soc 126:7812-7816
45. Gao YG, Sriram K, Wang AH (1993) Nucl Acid Res 21:4093-4101
46. Abrescia NGA, Malinina L, Subirana JA (1999) J Mol Biol 294:657-666
47. Subirana JA, Abrescia NGA (2000) Biophys Chem 86:179-189
48. Abrescia NGA, Malinina L, Fernández LG, Hunyh-Dinh T, Neidle S, Subirana JA (1999) Nucleic Acid Res 27:1593-1599
49. Yang XI, Robinson H, Gao YG, Wang AH-J (2000) Biochemistry 39:10950-10957
50. De Meester P, Goodgame DML, Skapski AC, Smith BT (1974) Biochim Biophys Acta 340:113-115
51. Collins AD, De Meester P, Goodgame DML, Skapski AC (1975) Biochim Biophys Acta 116:2958-2971
52. Sigel H, Massoud SS, Corfu NA (1994) J Am Chem Soc 116:2958-2971
53. Labiuk SL, Delbaere LTJ, Lee JS (2003) J Biol Inorg Chem 8:715-720
54. Hartzell B, McCord B (2005) Electrophoresis 26:1046-1056
55. Simonsson T (2001) Biol Chem 382:621-628
56. Guschlbauer W, Chantot JF, Thiele D (1990) J Biomol Struct Dyn 8:491-511
57. Sen D, Gilbert W (1992) Methods Enzymol 211:191-199
58. Blume SW, Guarcello V, Zacharias W, Miller DM (1997) Nucleic Acid Res 25:617-625